RNA–Protein interactions for RNA: ENST00000369278.4

UFL1-201, Transcript of UFM1 specific ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFL1, Length 4,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFL1-201ENST00000369278 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
UFL1-201ENST00000369278 A0A0U1RQG5 324 aaPredicted RBP10.42□□□□□ -0.74
UFL1-201ENST00000369278 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
UFL1-201ENST00000369278 RSF1Q96T23 1441 aaPredicted RBP10.41□□□□□ -0.74
UFL1-201ENST00000369278 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
UFL1-201ENST00000369278 ABCC9O60706 1549 aa10.4□□□□□ -0.74
UFL1-201ENST00000369278 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
UFL1-201ENST00000369278 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
UFL1-201ENST00000369278 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
UFL1-201ENST00000369278 RGS3P49796 1198 aa10.36□□□□□ -0.75
UFL1-201ENST00000369278 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
UFL1-201ENST00000369278 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
UFL1-201ENST00000369278 CEP162Q5TB80 1403 aa10.35□□□□□ -0.75
UFL1-201ENST00000369278 TONSLQ96HA7 1378 aa10.35□□□□□ -0.75
UFL1-201ENST00000369278 CANXP27824 592 aaKnown RBP10.34□□□□□ -0.75
UFL1-201ENST00000369278 PKNOX2Q96KN3 472 aa10.34□□□□□ -0.75
UFL1-201ENST00000369278 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
UFL1-201ENST00000369278 TPRNQ4KMQ1 711 aa10.32□□□□□ -0.76
UFL1-201ENST00000369278 FANCIQ9NVI1 1328 aa10.32□□□□□ -0.76
UFL1-201ENST00000369278 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
UFL1-201ENST00000369278 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
UFL1-201ENST00000369278 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
UFL1-201ENST00000369278 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
UFL1-201ENST00000369278 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
UFL1-201ENST00000369278 UBE2Q2Q8WVN8 375 aa10.28□□□□□ -0.76
UFL1-201ENST00000369278 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
UFL1-201ENST00000369278 TRIM44Q96DX7 344 aaPredicted RBP10.27□□□□□ -0.77
UFL1-201ENST00000369278 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
UFL1-201ENST00000369278 PNNQ9H307 717 aaKnown RBP10.24□□□□□ -0.77
UFL1-201ENST00000369278 HSP90AA2PQ14568 343 aaPredicted RBP10.23□□□□□ -0.77
UFL1-201ENST00000369278 ANP32BQ92688 251 aaKnown RBP10.23□□□□□ -0.77
UFL1-201ENST00000369278 PODXL2Q9NZ53 605 aa10.23□□□□□ -0.77
UFL1-201ENST00000369278 DHX57Q6P158 1386 aaKnown RBP10.23□□□□□ -0.77
UFL1-201ENST00000369278 NCLP19338 710 aaKnown RBP10.21□□□□□ -0.77
UFL1-201ENST00000369278 CCDC88BA6NC98 1476 aa10.2□□□□□ -0.78
UFL1-201ENST00000369278 SOGA1O94964 1423 aa10.2□□□□□ -0.78
UFL1-201ENST00000369278 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
UFL1-201ENST00000369278 RUSC2Q8N2Y8 1516 aa10.19□□□□□ -0.78
UFL1-201ENST00000369278 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
UFL1-201ENST00000369278 GSE1Q14687 1217 aa10.18□□□□□ -0.78
UFL1-201ENST00000369278 UPF2Q9HAU5 1272 aaKnown RBP10.18□□□□□ -0.78
UFL1-201ENST00000369278 NACADO15069 1562 aa10.17□□□□□ -0.78
UFL1-201ENST00000369278 RRP7BPQ9NSQ0 103 aa10.17□□□□□ -0.78
UFL1-201ENST00000369278 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
UFL1-201ENST00000369278 FRAT1Q92837 279 aaPredicted RBP10.16□□□□□ -0.78
UFL1-201ENST00000369278 TNIKQ9UKE5 1360 aa10.16□□□□□ -0.78
UFL1-201ENST00000369278 DNTTIP2Q5QJE6 756 aaKnown RBP10.15□□□□□ -0.78
UFL1-201ENST00000369278 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
UFL1-201ENST00000369278 CLIP1P30622 1438 aa10.15□□□□□ -0.79
UFL1-201ENST00000369278 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.79
UFL1-201ENST00000369278 EIF4G1Q04637 1599 aaKnown RBP10.14□□□□□ -0.79
UFL1-201ENST00000369278 C11orf95C9JLR9 678 aaPredicted RBP10.14□□□□□ -0.79
UFL1-201ENST00000369278 PLIN1O60240 522 aa10.14□□□□□ -0.79
UFL1-201ENST00000369278 PABPN1Q86U42 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
UFL1-201ENST00000369278 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
UFL1-201ENST00000369278 PDE4AP27815 886 aa10.12□□□□□ -0.79
UFL1-201ENST00000369278 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
UFL1-201ENST00000369278 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
UFL1-201ENST00000369278 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
UFL1-201ENST00000369278 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
UFL1-201ENST00000369278 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 SENP3Q9H4L4 574 aaPredicted RBP10.1□□□□□ -0.79
UFL1-201ENST00000369278 FOXD1Q16676 465 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 EXOC6Q8TAG9 804 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 CECR2Q9BXF3 1484 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 NFKBIBQ15653 356 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 NEUROD2Q15784 382 aa10.1□□□□□ -0.79
UFL1-201ENST00000369278 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
UFL1-201ENST00000369278 BECN1Q14457 450 aa10.09□□□□□ -0.79
UFL1-201ENST00000369278 ZMYND15Q9H091 742 aa10.09□□□□□ -0.79
UFL1-201ENST00000369278 WIZO95785 1651 aa10.08□□□□□ -0.8
UFL1-201ENST00000369278 FRAT2O75474 233 aaPredicted RBP10.08□□□□□ -0.8
UFL1-201ENST00000369278 PPP1R15AO75807 674 aaPredicted RBP10.08□□□□□ -0.8
UFL1-201ENST00000369278 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
UFL1-201ENST00000369278 PTMAP06454 111 aaKnown RBP10.08□□□□□ -0.8
UFL1-201ENST00000369278 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
UFL1-201ENST00000369278 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.07□□□□□ -0.8
UFL1-201ENST00000369278 MROH2BQ7Z745 1585 aa10.06□□□□□ -0.8
UFL1-201ENST00000369278 CDK11BP21127 795 aaKnown RBP10.06□□□□□ -0.8
UFL1-201ENST00000369278 FAM13BQ9NYF5 915 aa10.06□□□□□ -0.8
UFL1-201ENST00000369278 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
UFL1-201ENST00000369278 CCDC184Q52MB2 194 aa10.05□□□□□ -0.8
UFL1-201ENST00000369278 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
UFL1-201ENST00000369278 WDR97A6NE52 1622 aa10.05□□□□□ -0.8
UFL1-201ENST00000369278 USP35Q9P2H5 1018 aa10.04□□□□□ -0.8
UFL1-201ENST00000369278 WDR43Q15061 677 aaKnown RBP eCLIP10.04□□□□□ -0.8
UFL1-201ENST00000369278 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
UFL1-201ENST00000369278 BCL11BQ9C0K0 894 aaPredicted RBP10.03□□□□□ -0.8
UFL1-201ENST00000369278 SLC24A1O60721 1099 aa10.03□□□□□ -0.8
UFL1-201ENST00000369278 GOLGA6L3A6NEY3 463 aa10.02□□□□□ -0.81
UFL1-201ENST00000369278 RCAN3Q9UKA8 241 aa10.01□□□□□ -0.81
UFL1-201ENST00000369278 TCERG1O14776 1098 aaKnown RBP10.01□□□□□ -0.81
UFL1-201ENST00000369278 L1TD1Q5T7N2 865 aaKnown RBP10.01□□□□□ -0.81
UFL1-201ENST00000369278 MSNP26038 577 aaKnown RBP10.01□□□□□ -0.81
UFL1-201ENST00000369278 MAPKBP1O60336 1514 aa10□□□□□ -0.81
UFL1-201ENST00000369278 RGL3Q3MIN7 710 aa9.99□□□□□ -0.81
UFL1-201ENST00000369278 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
UFL1-201ENST00000369278 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
UFL1-201ENST00000369278 NUDCQ9Y266 331 aa9.98□□□□□ -0.81
UFL1-201ENST00000369278 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms