RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 FHAD1B1AJZ9 1412 aa14.21□□□□□ -0.14
VPS45-201ENST00000369128 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
VPS45-201ENST00000369128 TRIM26Q12899 539 aaPredicted RBP14.18□□□□□ -0.14
VPS45-201ENST00000369128 MAGI1Q96QZ7 1491 aaPredicted RBP14.14□□□□□ -0.15
VPS45-201ENST00000369128 EFCAB5A4FU69 1503 aa14.13□□□□□ -0.15
VPS45-201ENST00000369128 SAMD9Q5K651 1589 aa14.13□□□□□ -0.15
VPS45-201ENST00000369128 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
VPS45-201ENST00000369128 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
VPS45-201ENST00000369128 FHOD3Q2V2M9 1422 aa14.11□□□□□ -0.15
VPS45-201ENST00000369128 IQGAP2Q13576 1575 aa14.11□□□□□ -0.15
VPS45-201ENST00000369128 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
VPS45-201ENST00000369128 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.15
VPS45-201ENST00000369128 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
VPS45-201ENST00000369128 CEP170Q5SW79 1584 aa14.07□□□□□ -0.16
VPS45-201ENST00000369128 KIAA0586Q9BVV6 1533 aa14.02□□□□□ -0.16
VPS45-201ENST00000369128 UGGT2Q9NYU1 1516 aa14.02□□□□□ -0.17
VPS45-201ENST00000369128 TIAM1Q13009 1591 aa14.01□□□□□ -0.17
VPS45-201ENST00000369128 CHD1O14646 1710 aa14.01□□□□□ -0.17
VPS45-201ENST00000369128 CFAP43Q8NDM7 1665 aa14.01□□□□□ -0.17
VPS45-201ENST00000369128 LRRIQ1Q96JM4 1722 aa14.01□□□□□ -0.17
VPS45-201ENST00000369128 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
VPS45-201ENST00000369128 NUP160Q12769 1436 aa14□□□□□ -0.17
VPS45-201ENST00000369128 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
VPS45-201ENST00000369128 APLP2Q06481 763 aa13.99□□□□□ -0.17
VPS45-201ENST00000369128 FYCO1Q9BQS8 1478 aa13.99□□□□□ -0.17
VPS45-201ENST00000369128 FBLN2P98095 1184 aa13.99□□□□□ -0.17
VPS45-201ENST00000369128 KIAA0556O60303 1618 aa13.98□□□□□ -0.17
VPS45-201ENST00000369128 FMN1Q68DA7 1419 aa13.98□□□□□ -0.17
VPS45-201ENST00000369128 CASKIN1Q8WXD9 1431 aa13.98□□□□□ -0.17
VPS45-201ENST00000369128 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
VPS45-201ENST00000369128 MAP3K1Q13233 1512 aa13.97□□□□□ -0.17
VPS45-201ENST00000369128 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
VPS45-201ENST00000369128 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
VPS45-201ENST00000369128 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
VPS45-201ENST00000369128 JPH4Q96JJ6 628 aa13.84□□□□□ -0.19
VPS45-201ENST00000369128 SHROOM2Q13796 1616 aa13.84□□□□□ -0.19
VPS45-201ENST00000369128 MAGI3Q5TCQ9 1506 aa13.84□□□□□ -0.19
VPS45-201ENST00000369128 HRCP23327 699 aa13.84□□□□□ -0.19
VPS45-201ENST00000369128 CDK13Q14004 1512 aaKnown RBP13.84□□□□□ -0.19
VPS45-201ENST00000369128 RAPGEF6Q8TEU7 1601 aa13.83□□□□□ -0.19
VPS45-201ENST00000369128 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.2
VPS45-201ENST00000369128 EPRSP07814 1512 aaKnown RBP13.83□□□□□ -0.2
VPS45-201ENST00000369128 PHLDB1Q86UU1 1377 aa13.82□□□□□ -0.2
VPS45-201ENST00000369128 CCDC18Q5T9S5 1454 aa13.81□□□□□ -0.2
VPS45-201ENST00000369128 NUP153P49790 1475 aaKnown RBP13.81□□□□□ -0.2
VPS45-201ENST00000369128 CLASP1Q7Z460 1538 aa13.81□□□□□ -0.2
VPS45-201ENST00000369128 CARMIL2Q6F5E8 1435 aa13.8□□□□□ -0.2
VPS45-201ENST00000369128 PLB1Q6P1J6 1458 aa13.8□□□□□ -0.2
VPS45-201ENST00000369128 PRG4Q92954 1404 aaPredicted RBP13.79□□□□□ -0.2
VPS45-201ENST00000369128 EHBP1L1Q8N3D4 1523 aa13.79□□□□□ -0.2
VPS45-201ENST00000369128 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
VPS45-201ENST00000369128 MTUS2Q5JR59 1369 aa13.77□□□□□ -0.2
VPS45-201ENST00000369128 CCNB3Q8WWL7 1395 aa13.77□□□□□ -0.2
VPS45-201ENST00000369128 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
VPS45-201ENST00000369128 SUPT6HQ7KZ85 1726 aaKnown RBP13.77□□□□□ -0.21
VPS45-201ENST00000369128 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
VPS45-201ENST00000369128 ABCA8O94911 1581 aa13.76□□□□□ -0.21
VPS45-201ENST00000369128 NCOA2Q15596 1464 aa13.75□□□□□ -0.21
VPS45-201ENST00000369128 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
VPS45-201ENST00000369128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
VPS45-201ENST00000369128 FGD6Q6ZV73 1430 aa13.69□□□□□ -0.22
VPS45-201ENST00000369128 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
VPS45-201ENST00000369128 PTPRGP23470 1445 aa13.68□□□□□ -0.22
VPS45-201ENST00000369128 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
VPS45-201ENST00000369128 KIF14Q15058 1648 aa13.66□□□□□ -0.22
VPS45-201ENST00000369128 ATP10BO94823 1461 aa13.65□□□□□ -0.22
VPS45-201ENST00000369128 ADCY10Q96PN6 1610 aa13.65□□□□□ -0.22
VPS45-201ENST00000369128 ITGAEP38570 1179 aa13.64□□□□□ -0.23
VPS45-201ENST00000369128 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
VPS45-201ENST00000369128 TROQ12816 1431 aaPredicted RBP13.63□□□□□ -0.23
VPS45-201ENST00000369128 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
VPS45-201ENST00000369128 CCER1Q8TC90 406 aaPredicted RBP13.62□□□□□ -0.23
VPS45-201ENST00000369128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.62□□□□□ -0.23
VPS45-201ENST00000369128 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
VPS45-201ENST00000369128 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
VPS45-201ENST00000369128 TCOF1Q13428 1488 aaKnown RBP13.59□□□□□ -0.23
VPS45-201ENST00000369128 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
VPS45-201ENST00000369128 CDK11AQ9UQ88 783 aaPredicted RBP13.58□□□□□ -0.24
VPS45-201ENST00000369128 CDC42BPAQ5VT25 1732 aa13.57□□□□□ -0.24
VPS45-201ENST00000369128 ITSN2Q9NZM3 1697 aa13.57□□□□□ -0.24
VPS45-201ENST00000369128 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
VPS45-201ENST00000369128 ZCCHC11Q5TAX3 1644 aaKnown RBP13.56□□□□□ -0.24
VPS45-201ENST00000369128 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
VPS45-201ENST00000369128 ZEB1P37275 1124 aaPredicted RBP13.55□□□□□ -0.24
VPS45-201ENST00000369128 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
VPS45-201ENST00000369128 GPATCH8Q9UKJ3 1502 aaKnown RBP13.54□□□□□ -0.24
VPS45-201ENST00000369128 RAB3GAP2Q9H2M9 1393 aa13.54□□□□□ -0.24
VPS45-201ENST00000369128 UHRF1BP1LA0JNW5 1464 aa13.54□□□□□ -0.24
VPS45-201ENST00000369128 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
VPS45-201ENST00000369128 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
VPS45-201ENST00000369128 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
VPS45-201ENST00000369128 SETD5Q9C0A6 1442 aa13.51□□□□□ -0.25
VPS45-201ENST00000369128 ZNF644Q9H582 1327 aaPredicted RBP13.5□□□□□ -0.25
VPS45-201ENST00000369128 TTC37Q6PGP7 1564 aa13.5□□□□□ -0.25
VPS45-201ENST00000369128 DNMT1P26358 1616 aaKnown RBP13.5□□□□□ -0.25
VPS45-201ENST00000369128 CAMSAP2Q08AD1 1489 aa13.5□□□□□ -0.25
VPS45-201ENST00000369128 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
VPS45-201ENST00000369128 PREX2Q70Z35 1606 aa13.48□□□□□ -0.25
VPS45-201ENST00000369128 HFM1A2PYH4 1435 aa13.48□□□□□ -0.25
VPS45-201ENST00000369128 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms