RNA–Protein interactions for RNA: ENST00000368916.1

GABPB2-201, Transcript of GA binding protein transcription factor subunit beta 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GABPB2, Length 1,680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB2-201ENST00000368916 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
GABPB2-201ENST00000368916 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
GABPB2-201ENST00000368916 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
GABPB2-201ENST00000368916 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
GABPB2-201ENST00000368916 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
GABPB2-201ENST00000368916 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
GABPB2-201ENST00000368916 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
GABPB2-201ENST00000368916 FBLN2P98095 1184 aa11.12□□□□□ -0.63
GABPB2-201ENST00000368916 SPDYE1Q8NFV5 336 aaPredicted RBP11.11□□□□□ -0.63
GABPB2-201ENST00000368916 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
GABPB2-201ENST00000368916 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
GABPB2-201ENST00000368916 ZNF316A6NFI3 1004 aaPredicted RBP11.1□□□□□ -0.63
GABPB2-201ENST00000368916 DCAF8L2P0C7V8 631 aa11.1□□□□□ -0.63
GABPB2-201ENST00000368916 SPNS2Q8IVW8 549 aa11.09□□□□□ -0.63
GABPB2-201ENST00000368916 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
GABPB2-201ENST00000368916 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
GABPB2-201ENST00000368916 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
GABPB2-201ENST00000368916 EEA1Q15075 1411 aa10.95□□□□□ -0.66
GABPB2-201ENST00000368916 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
GABPB2-201ENST00000368916 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
GABPB2-201ENST00000368916 ZNF692Q9BU19 519 aaPredicted RBP10.92□□□□□ -0.66
GABPB2-201ENST00000368916 ANP32EQ9BTT0 268 aa10.91□□□□□ -0.66
GABPB2-201ENST00000368916 TNIKQ9UKE5 1360 aa10.89□□□□□ -0.67
GABPB2-201ENST00000368916 FAM9AQ8IZU1 332 aaPredicted RBP10.89□□□□□ -0.67
GABPB2-201ENST00000368916 SCUBE2Q9NQ36 999 aa10.83□□□□□ -0.68
GABPB2-201ENST00000368916 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
GABPB2-201ENST00000368916 MIER1Q8N108 512 aa10.81□□□□□ -0.68
GABPB2-201ENST00000368916 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
GABPB2-201ENST00000368916 MYT1LQ9UL68 1186 aa10.8□□□□□ -0.68
GABPB2-201ENST00000368916 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
GABPB2-201ENST00000368916 BAZ1AQ9NRL2 1556 aaPredicted RBP10.78□□□□□ -0.68
GABPB2-201ENST00000368916 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
GABPB2-201ENST00000368916 EIF4G1Q04637 1599 aaKnown RBP10.77□□□□□ -0.69
GABPB2-201ENST00000368916 YTHDC1Q96MU7 727 aaKnown RBP10.77□□□□□ -0.69
GABPB2-201ENST00000368916 SUPT16HQ9Y5B9 1047 aaKnown RBP10.77□□□□□ -0.69
GABPB2-201ENST00000368916 SCRIBQ14160 1630 aa10.77□□□□□ -0.69
GABPB2-201ENST00000368916 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
GABPB2-201ENST00000368916 BCL11AQ9H165 835 aa10.76□□□□□ -0.69
GABPB2-201ENST00000368916 NACADO15069 1562 aa10.75□□□□□ -0.69
GABPB2-201ENST00000368916 FKBP8Q14318 412 aa10.73□□□□□ -0.69
GABPB2-201ENST00000368916 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
GABPB2-201ENST00000368916 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
GABPB2-201ENST00000368916 TSHZ2Q9NRE2 1034 aa10.71□□□□□ -0.69
GABPB2-201ENST00000368916 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
GABPB2-201ENST00000368916 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
GABPB2-201ENST00000368916 FARP1Q9Y4F1 1045 aaPredicted RBP10.67□□□□□ -0.7
GABPB2-201ENST00000368916 METRNQ9UJH8 293 aa10.66□□□□□ -0.7
GABPB2-201ENST00000368916 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
GABPB2-201ENST00000368916 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
GABPB2-201ENST00000368916 TOP2AP11388 1531 aaKnown RBP10.65□□□□□ -0.71
GABPB2-201ENST00000368916 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.71
GABPB2-201ENST00000368916 ERICH6Q7L0X2 663 aa10.63□□□□□ -0.71
GABPB2-201ENST00000368916 WIZO95785 1651 aa10.63□□□□□ -0.71
GABPB2-201ENST00000368916 KIF21BO75037 1637 aa10.63□□□□□ -0.71
GABPB2-201ENST00000368916 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
GABPB2-201ENST00000368916 UBTFP17480 764 aaKnown RBP10.6□□□□□ -0.71
GABPB2-201ENST00000368916 CECR2Q9BXF3 1484 aa10.6□□□□□ -0.71
GABPB2-201ENST00000368916 NEFLP07196 543 aa10.6□□□□□ -0.71
GABPB2-201ENST00000368916 C7P10643 843 aa10.6□□□□□ -0.71
GABPB2-201ENST00000368916 SLC39A7Q92504 469 aa10.59□□□□□ -0.71
GABPB2-201ENST00000368916 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
GABPB2-201ENST00000368916 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
GABPB2-201ENST00000368916 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
GABPB2-201ENST00000368916 CUX2O14529 1486 aa10.55□□□□□ -0.72
GABPB2-201ENST00000368916 FANCIQ9NVI1 1328 aa10.55□□□□□ -0.72
GABPB2-201ENST00000368916 CLIP1P30622 1438 aa10.54□□□□□ -0.72
GABPB2-201ENST00000368916 DHX57Q6P158 1386 aaKnown RBP10.53□□□□□ -0.72
GABPB2-201ENST00000368916 SOGA1O94964 1423 aa10.52□□□□□ -0.72
GABPB2-201ENST00000368916 CCER2I3L3R5 266 aa10.52□□□□□ -0.73
GABPB2-201ENST00000368916 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
GABPB2-201ENST00000368916 ABCC8Q09428 1581 aa10.51□□□□□ -0.73
GABPB2-201ENST00000368916 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
GABPB2-201ENST00000368916 ZRANB1Q9UGI0 708 aa10.5□□□□□ -0.73
GABPB2-201ENST00000368916 ST18O60284 1047 aa10.49□□□□□ -0.73
GABPB2-201ENST00000368916 RRBP1Q9P2E9 1410 aaKnown RBP10.47□□□□□ -0.73
GABPB2-201ENST00000368916 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
GABPB2-201ENST00000368916 SMARCA4P51532 1647 aa10.46□□□□□ -0.73
GABPB2-201ENST00000368916 PAK3O75914 559 aaPredicted RBP10.44□□□□□ -0.74
GABPB2-201ENST00000368916 CDK11AQ9UQ88 783 aaPredicted RBP10.44□□□□□ -0.74
GABPB2-201ENST00000368916 ERICH3Q5RHP9 1530 aa10.43□□□□□ -0.74
GABPB2-201ENST00000368916 PROM2Q8N271 834 aa10.42□□□□□ -0.74
GABPB2-201ENST00000368916 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
GABPB2-201ENST00000368916 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
GABPB2-201ENST00000368916 PEG3Q9GZU2 1588 aa10.38□□□□□ -0.75
GABPB2-201ENST00000368916 ANP32CO43423 234 aa10.38□□□□□ -0.75
GABPB2-201ENST00000368916 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
GABPB2-201ENST00000368916 RUSC2Q8N2Y8 1516 aa10.37□□□□□ -0.75
GABPB2-201ENST00000368916 CCNB3Q8WWL7 1395 aa10.35□□□□□ -0.75
GABPB2-201ENST00000368916 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
GABPB2-201ENST00000368916 SYNJ1O43426 1573 aa10.33□□□□□ -0.76
GABPB2-201ENST00000368916 NPM1P06748 294 aaKnown RBP eCLIP10.32□□□□□ -0.76
GABPB2-201ENST00000368916 PPP1R15AO75807 674 aaPredicted RBP10.31□□□□□ -0.76
GABPB2-201ENST00000368916 RAPGEF2Q9Y4G8 1499 aa10.3□□□□□ -0.76
GABPB2-201ENST00000368916 PRXQ9BXM0 1461 aa10.28□□□□□ -0.76
GABPB2-201ENST00000368916 SETD5Q9C0A6 1442 aa10.28□□□□□ -0.76
GABPB2-201ENST00000368916 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
GABPB2-201ENST00000368916 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
GABPB2-201ENST00000368916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.28□□□□□ -0.76
GABPB2-201ENST00000368916 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
GABPB2-201ENST00000368916 BCANQ96GW7 911 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms