RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 RANGAP1P46060 587 aaPredicted RBP24.89■■□□□ 1.58
CHTOP-201ENST00000368686 NOP58Q9Y2X3 529 aaKnown RBP24.89■■□□□ 1.58
CHTOP-201ENST00000368686 PPP4R2Q9NY27 417 aa24.89■■□□□ 1.57
CHTOP-201ENST00000368686 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
CHTOP-201ENST00000368686 IRX6P78412 446 aaPredicted RBP24.82■■□□□ 1.56
CHTOP-201ENST00000368686 SETD5Q9C0A6 1442 aa24.8■■□□□ 1.56
CHTOP-201ENST00000368686 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
CHTOP-201ENST00000368686 NBR1Q14596 966 aa24.78■■□□□ 1.56
CHTOP-201ENST00000368686 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
CHTOP-201ENST00000368686 SALL2Q9Y467 1007 aaPredicted RBP24.77■■□□□ 1.56
CHTOP-201ENST00000368686 SIN3AQ96ST3 1273 aa24.73■■□□□ 1.55
CHTOP-201ENST00000368686 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
CHTOP-201ENST00000368686 RTL5Q5HYW3 569 aaPredicted RBP24.7■■□□□ 1.55
CHTOP-201ENST00000368686 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
CHTOP-201ENST00000368686 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
CHTOP-201ENST00000368686 HIRIP3Q9BW71 556 aaPredicted RBP24.68■■□□□ 1.54
CHTOP-201ENST00000368686 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
CHTOP-201ENST00000368686 B4GALNT3Q6L9W6 998 aa24.6■■□□□ 1.53
CHTOP-201ENST00000368686 MAP3K1Q13233 1512 aa24.59■■□□□ 1.53
CHTOP-201ENST00000368686 IPO9Q96P70 1041 aaKnown RBP24.59■■□□□ 1.53
CHTOP-201ENST00000368686 ANP32AP39687 249 aaKnown RBP24.58■■□□□ 1.53
CHTOP-201ENST00000368686 UBE2Q2Q8WVN8 375 aa24.58■■□□□ 1.53
CHTOP-201ENST00000368686 IL27Q8NEV9 243 aa24.55■■□□□ 1.52
CHTOP-201ENST00000368686 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
CHTOP-201ENST00000368686 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
CHTOP-201ENST00000368686 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
CHTOP-201ENST00000368686 ZBTB47Q9UFB7 747 aaPredicted RBP24.51■■□□□ 1.51
CHTOP-201ENST00000368686 CCDC136Q96JN2 1154 aa24.51■■□□□ 1.51
CHTOP-201ENST00000368686 TONSLQ96HA7 1378 aa24.49■■□□□ 1.51
CHTOP-201ENST00000368686 WASHC2AQ641Q2 1341 aa24.48■■□□□ 1.51
CHTOP-201ENST00000368686 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
CHTOP-201ENST00000368686 ZBED9Q6R2W3 1325 aa24.44■■□□□ 1.5
CHTOP-201ENST00000368686 LRRC9Q6ZRR7 1453 aa24.42■■□□□ 1.5
CHTOP-201ENST00000368686 ATAD2BQ9ULI0 1458 aa24.4■■□□□ 1.5
CHTOP-201ENST00000368686 RTN4Q9NQC3 1192 aaKnown RBP24.4■■□□□ 1.5
CHTOP-201ENST00000368686 PHLDB1Q86UU1 1377 aa24.4■■□□□ 1.5
CHTOP-201ENST00000368686 USP35Q9P2H5 1018 aa24.4■■□□□ 1.5
CHTOP-201ENST00000368686 C11orf95C9JLR9 678 aaPredicted RBP24.39■■□□□ 1.5
CHTOP-201ENST00000368686 BICRAQ9NZM4 1560 aa24.37■■□□□ 1.49
CHTOP-201ENST00000368686 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
CHTOP-201ENST00000368686 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
CHTOP-201ENST00000368686 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.36■■□□□ 1.49
CHTOP-201ENST00000368686 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
CHTOP-201ENST00000368686 WASHC2CQ9Y4E1 1318 aa24.32■■□□□ 1.48
CHTOP-201ENST00000368686 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
CHTOP-201ENST00000368686 CNTLNQ9NXG0 1405 aa24.31■■□□□ 1.48
CHTOP-201ENST00000368686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.31■■□□□ 1.48
CHTOP-201ENST00000368686 CFAP43Q8NDM7 1665 aa24.3■■□□□ 1.48
CHTOP-201ENST00000368686 CCDC184Q52MB2 194 aa24.26■■□□□ 1.47
CHTOP-201ENST00000368686 SMG6Q86US8 1419 aaKnown RBP24.25■■□□□ 1.47
CHTOP-201ENST00000368686 KDM5BQ9UGL1 1544 aa24.25■■□□□ 1.47
CHTOP-201ENST00000368686 FAM9BQ8IZU0 186 aa24.24■■□□□ 1.47
CHTOP-201ENST00000368686 NEFMP07197 916 aa24.23■■□□□ 1.47
CHTOP-201ENST00000368686 UACAQ9BZF9 1416 aa24.23■■□□□ 1.47
CHTOP-201ENST00000368686 RNF123Q5XPI4 1314 aa24.22■■□□□ 1.47
CHTOP-201ENST00000368686 MRS2Q9HD23 443 aa24.22■■□□□ 1.47
CHTOP-201ENST00000368686 PRKRIP1Q9H875 184 aaPredicted RBP24.21■■□□□ 1.47
CHTOP-201ENST00000368686 CCDC18Q5T9S5 1454 aa24.21■■□□□ 1.47
CHTOP-201ENST00000368686 PPM1GO15355 546 aaPredicted RBP24.19■■□□□ 1.46
CHTOP-201ENST00000368686 HSPA5P11021 654 aaKnown RBP24.19■■□□□ 1.46
CHTOP-201ENST00000368686 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
CHTOP-201ENST00000368686 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
CHTOP-201ENST00000368686 CUX1P39880 1505 aa24.14■■□□□ 1.45
CHTOP-201ENST00000368686 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
CHTOP-201ENST00000368686 EIF4G2P78344 907 aaKnown RBP eCLIP24.12■■□□□ 1.45
CHTOP-201ENST00000368686 HFM1A2PYH4 1435 aa24.12■■□□□ 1.45
CHTOP-201ENST00000368686 LAS1LQ9Y4W2 734 aaKnown RBP24.11■■□□□ 1.45
CHTOP-201ENST00000368686 PTPN23Q9H3S7 1636 aa24.1■■□□□ 1.45
CHTOP-201ENST00000368686 PCF11O94913 1555 aaKnown RBP24.09■■□□□ 1.45
CHTOP-201ENST00000368686 NCOA1Q15788 1441 aa24.08■■□□□ 1.45
CHTOP-201ENST00000368686 CCDC7Q96M83 1385 aa24.07■■□□□ 1.44
CHTOP-201ENST00000368686 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
CHTOP-201ENST00000368686 BRPF3Q9ULD4 1205 aa24.05■■□□□ 1.44
CHTOP-201ENST00000368686 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
CHTOP-201ENST00000368686 EIF5BO60841 1220 aaKnown RBP24.04■■□□□ 1.44
CHTOP-201ENST00000368686 GSE1Q14687 1217 aa24.04■■□□□ 1.44
CHTOP-201ENST00000368686 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
CHTOP-201ENST00000368686 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
CHTOP-201ENST00000368686 POLR1AO95602 1720 aaPredicted RBP24■■□□□ 1.43
CHTOP-201ENST00000368686 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
CHTOP-201ENST00000368686 MS4A1P11836 297 aa23.98■■□□□ 1.43
CHTOP-201ENST00000368686 PDE4AP27815 886 aa23.98■■□□□ 1.43
CHTOP-201ENST00000368686 FYCO1Q9BQS8 1478 aa23.98■■□□□ 1.43
CHTOP-201ENST00000368686 NAIPQ13075 1403 aa23.96■■□□□ 1.43
CHTOP-201ENST00000368686 BACH2Q9BYV9 841 aa23.96■■□□□ 1.43
CHTOP-201ENST00000368686 FMN1Q68DA7 1419 aa23.95■■□□□ 1.43
CHTOP-201ENST00000368686 DDRGK1Q96HY6 314 aa23.95■■□□□ 1.43
CHTOP-201ENST00000368686 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.425e-9■■■■■ 42.9
CHTOP-201ENST00000368686 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
CHTOP-201ENST00000368686 IGF1RP08069 1367 aa23.9■■□□□ 1.42
CHTOP-201ENST00000368686 HECW1Q76N89 1606 aa23.9■■□□□ 1.42
CHTOP-201ENST00000368686 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
CHTOP-201ENST00000368686 CASKIN1Q8WXD9 1431 aa23.88■■□□□ 1.41
CHTOP-201ENST00000368686 FAM43AQ8N2R8 423 aa23.87■■□□□ 1.41
CHTOP-201ENST00000368686 NFKBIBQ15653 356 aa23.85■■□□□ 1.41
CHTOP-201ENST00000368686 PKNOX2Q96KN3 472 aa23.85■■□□□ 1.41
CHTOP-201ENST00000368686 CFTRP13569 1480 aa23.85■■□□□ 1.41
CHTOP-201ENST00000368686 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
CHTOP-201ENST00000368686 CARMIL1Q5VZK9 1371 aa23.84■■□□□ 1.41
CHTOP-201ENST00000368686 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms