RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
TUBE1-201ENST00000368657 DIP2BQ9P265 1576 aa19.77■□□□□ 0.76
TUBE1-201ENST00000368657 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
TUBE1-201ENST00000368657 LMTK3Q96Q04 1460 aa19.76■□□□□ 0.75
TUBE1-201ENST00000368657 SHROOM2Q13796 1616 aa19.76■□□□□ 0.75
TUBE1-201ENST00000368657 NUP160Q12769 1436 aa19.76■□□□□ 0.75
TUBE1-201ENST00000368657 ADRA2BP18089 450 aa19.74■□□□□ 0.75
TUBE1-201ENST00000368657 SOCS7O14512 581 aa19.69■□□□□ 0.74
TUBE1-201ENST00000368657 PRG4Q92954 1404 aaPredicted RBP19.68■□□□□ 0.74
TUBE1-201ENST00000368657 TSPOAP1O95153 1857 aa19.67■□□□□ 0.74
TUBE1-201ENST00000368657 JPH4Q96JJ6 628 aa19.67■□□□□ 0.74
TUBE1-201ENST00000368657 CUX1P39880 1505 aa19.66■□□□□ 0.74
TUBE1-201ENST00000368657 ABCA10Q8WWZ4 1543 aa19.62■□□□□ 0.73
TUBE1-201ENST00000368657 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
TUBE1-201ENST00000368657 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
TUBE1-201ENST00000368657 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
TUBE1-201ENST00000368657 ADAMTS12P58397 1594 aa19.54■□□□□ 0.72
TUBE1-201ENST00000368657 ADCY10Q96PN6 1610 aa19.52■□□□□ 0.72
TUBE1-201ENST00000368657 ILDR2Q71H61 639 aa19.52■□□□□ 0.72
TUBE1-201ENST00000368657 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
TUBE1-201ENST00000368657 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
TUBE1-201ENST00000368657 COL17A1Q9UMD9 1497 aaPredicted RBP19.42■□□□□ 0.7
TUBE1-201ENST00000368657 GLI2P10070 1586 aa19.4■□□□□ 0.7
TUBE1-201ENST00000368657 PPRC1Q5VV67 1664 aaKnown RBP19.39■□□□□ 0.69
TUBE1-201ENST00000368657 MSH5O43196 834 aa19.38■□□□□ 0.69
TUBE1-201ENST00000368657 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
TUBE1-201ENST00000368657 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
TUBE1-201ENST00000368657 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
TUBE1-201ENST00000368657 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
TUBE1-201ENST00000368657 TEX14Q8IWB6 1497 aa19.31■□□□□ 0.68
TUBE1-201ENST00000368657 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
TUBE1-201ENST00000368657 PTPRGP23470 1445 aa19.27■□□□□ 0.68
TUBE1-201ENST00000368657 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
TUBE1-201ENST00000368657 CERKQ8TCT0 537 aa19.26■□□□□ 0.67
TUBE1-201ENST00000368657 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
TUBE1-201ENST00000368657 MAP3K4Q9Y6R4 1608 aa19.19■□□□□ 0.66
TUBE1-201ENST00000368657 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
TUBE1-201ENST00000368657 PTPRMP28827 1452 aa19.16■□□□□ 0.66
TUBE1-201ENST00000368657 TTBK1Q5TCY1 1321 aaPredicted RBP19.15■□□□□ 0.66
TUBE1-201ENST00000368657 TNIKQ9UKE5 1360 aa19.13■□□□□ 0.65
TUBE1-201ENST00000368657 UHRF1BP1LA0JNW5 1464 aa19.13■□□□□ 0.65
TUBE1-201ENST00000368657 PCF11O94913 1555 aaKnown RBP19.11■□□□□ 0.65
TUBE1-201ENST00000368657 CARMIL2Q6F5E8 1435 aa19.08■□□□□ 0.65
TUBE1-201ENST00000368657 CUL7Q14999 1698 aa19.08■□□□□ 0.65
TUBE1-201ENST00000368657 UACAQ9BZF9 1416 aa19.06■□□□□ 0.64
TUBE1-201ENST00000368657 SPATA31D1Q6ZQQ2 1576 aa19.06■□□□□ 0.64
TUBE1-201ENST00000368657 KIF21BO75037 1637 aa19.05■□□□□ 0.64
TUBE1-201ENST00000368657 BIVM-ERCC5R4GMW8 1640 aa19.03■□□□□ 0.64
TUBE1-201ENST00000368657 ADAMTSL3P82987 1691 aa19.03■□□□□ 0.64
TUBE1-201ENST00000368657 KDM5BQ9UGL1 1544 aa19.03■□□□□ 0.64
TUBE1-201ENST00000368657 MAGI3Q5TCQ9 1506 aa19.01■□□□□ 0.63
TUBE1-201ENST00000368657 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
TUBE1-201ENST00000368657 HSPA2P54652 639 aa18.98■□□□□ 0.63
TUBE1-201ENST00000368657 WDR7Q9Y4E6 1490 aa18.92■□□□□ 0.62
TUBE1-201ENST00000368657 ARAP3Q8WWN8 1544 aa18.9■□□□□ 0.62
TUBE1-201ENST00000368657 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
TUBE1-201ENST00000368657 IGF1RP08069 1367 aa18.9■□□□□ 0.62
TUBE1-201ENST00000368657 ARID4BQ4LE39 1312 aaPredicted RBP18.89■□□□□ 0.61
TUBE1-201ENST00000368657 CFAP43Q8NDM7 1665 aa18.89■□□□□ 0.61
TUBE1-201ENST00000368657 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
TUBE1-201ENST00000368657 DMRT2Q9Y5R5 561 aa18.87■□□□□ 0.61
TUBE1-201ENST00000368657 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
TUBE1-201ENST00000368657 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
TUBE1-201ENST00000368657 MADDQ8WXG6 1647 aa18.84■□□□□ 0.61
TUBE1-201ENST00000368657 DISP1Q96F81 1524 aa18.79■□□□□ 0.6
TUBE1-201ENST00000368657 IQGAP2Q13576 1575 aa18.77■□□□□ 0.6
TUBE1-201ENST00000368657 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
TUBE1-201ENST00000368657 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
TUBE1-201ENST00000368657 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
TUBE1-201ENST00000368657 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
TUBE1-201ENST00000368657 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
TUBE1-201ENST00000368657 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
TUBE1-201ENST00000368657 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
TUBE1-201ENST00000368657 UGGT2Q9NYU1 1516 aa18.64■□□□□ 0.58
TUBE1-201ENST00000368657 NEO1Q92859 1461 aa18.62■□□□□ 0.57
TUBE1-201ENST00000368657 KIAA0556O60303 1618 aa18.6■□□□□ 0.57
TUBE1-201ENST00000368657 PTPRTO14522 1441 aa18.59■□□□□ 0.57
TUBE1-201ENST00000368657 STRCQ7RTU9 1775 aa18.58■□□□□ 0.57
TUBE1-201ENST00000368657 FANCAO15360 1455 aa18.58■□□□□ 0.56
TUBE1-201ENST00000368657 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
TUBE1-201ENST00000368657 ABCA8O94911 1581 aa18.53■□□□□ 0.56
TUBE1-201ENST00000368657 FRMPD1Q5SYB0 1578 aa18.53■□□□□ 0.56
TUBE1-201ENST00000368657 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
TUBE1-201ENST00000368657 LTBP4Q8N2S1 1624 aa18.52■□□□□ 0.56
TUBE1-201ENST00000368657 AKNAQ7Z591 1439 aa18.52■□□□□ 0.56
TUBE1-201ENST00000368657 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
TUBE1-201ENST00000368657 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
TUBE1-201ENST00000368657 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
TUBE1-201ENST00000368657 MLECQ14165 292 aa18.51■□□□□ 0.55
TUBE1-201ENST00000368657 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
TUBE1-201ENST00000368657 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
TUBE1-201ENST00000368657 UHRF1BP1Q6BDS2 1440 aa18.47■□□□□ 0.55
TUBE1-201ENST00000368657 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.55
TUBE1-201ENST00000368657 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
TUBE1-201ENST00000368657 FHOD3Q2V2M9 1422 aa18.46■□□□□ 0.55
TUBE1-201ENST00000368657 GOLGA3Q08378 1498 aa18.46■□□□□ 0.54
TUBE1-201ENST00000368657 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
TUBE1-201ENST00000368657 ATP10BO94823 1461 aa18.42■□□□□ 0.54
TUBE1-201ENST00000368657 POTEDQ86YR6 584 aa18.42■□□□□ 0.54
TUBE1-201ENST00000368657 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms