RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
LMX1A-203ENST00000367893 RUSC2Q8N2Y8 1516 aa21.22■□□□□ 0.99
LMX1A-203ENST00000367893 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
LMX1A-203ENST00000367893 EEA1Q15075 1411 aa21.15■□□□□ 0.98
LMX1A-203ENST00000367893 CUL7Q14999 1698 aa21.13■□□□□ 0.97
LMX1A-203ENST00000367893 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
LMX1A-203ENST00000367893 CSRNP3Q8WYN3 585 aa21■□□□□ 0.95
LMX1A-203ENST00000367893 ADCY10Q96PN6 1610 aa20.97■□□□□ 0.95
LMX1A-203ENST00000367893 FAM9AQ8IZU1 332 aaPredicted RBP20.97■□□□□ 0.95
LMX1A-203ENST00000367893 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
LMX1A-203ENST00000367893 PRXQ9BXM0 1461 aa20.94■□□□□ 0.94
LMX1A-203ENST00000367893 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
LMX1A-203ENST00000367893 PTPRGP23470 1445 aa20.92■□□□□ 0.94
LMX1A-203ENST00000367893 IQGAP2Q13576 1575 aa20.92■□□□□ 0.94
LMX1A-203ENST00000367893 RAPGEF2Q9Y4G8 1499 aa20.91■□□□□ 0.94
LMX1A-203ENST00000367893 NPM1P06748 294 aaKnown RBP eCLIP20.9■□□□□ 0.94
LMX1A-203ENST00000367893 KIF21BO75037 1637 aa20.9■□□□□ 0.94
LMX1A-203ENST00000367893 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
LMX1A-203ENST00000367893 KIF13AQ9H1H9 1805 aa20.89■□□□□ 0.94
LMX1A-203ENST00000367893 CARMIL2Q6F5E8 1435 aa20.89■□□□□ 0.93
LMX1A-203ENST00000367893 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
LMX1A-203ENST00000367893 FAM69CQ0P6D2 419 aa20.87■□□□□ 0.93
LMX1A-203ENST00000367893 DIP2BQ9P265 1576 aa20.85■□□□□ 0.93
LMX1A-203ENST00000367893 UGGT2Q9NYU1 1516 aa20.84■□□□□ 0.93
LMX1A-203ENST00000367893 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
LMX1A-203ENST00000367893 UHRF1BP1LA0JNW5 1464 aa20.8■□□□□ 0.92
LMX1A-203ENST00000367893 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
LMX1A-203ENST00000367893 GOLGA3Q08378 1498 aa20.78■□□□□ 0.92
LMX1A-203ENST00000367893 UACAQ9BZF9 1416 aa20.78■□□□□ 0.92
LMX1A-203ENST00000367893 KIAA0556O60303 1618 aa20.73■□□□□ 0.91
LMX1A-203ENST00000367893 ASXL2Q76L83 1435 aa20.73■□□□□ 0.91
LMX1A-203ENST00000367893 KDM5BQ9UGL1 1544 aa20.71■□□□□ 0.91
LMX1A-203ENST00000367893 PLB1Q6P1J6 1458 aa20.7■□□□□ 0.9
LMX1A-203ENST00000367893 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
LMX1A-203ENST00000367893 CTTNBP2Q8WZ74 1663 aa20.66■□□□□ 0.9
LMX1A-203ENST00000367893 GLI2P10070 1586 aa20.65■□□□□ 0.9
LMX1A-203ENST00000367893 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
LMX1A-203ENST00000367893 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
LMX1A-203ENST00000367893 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
LMX1A-203ENST00000367893 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
LMX1A-203ENST00000367893 KDM6BO15054 1643 aa20.59■□□□□ 0.89
LMX1A-203ENST00000367893 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
LMX1A-203ENST00000367893 ABCA8O94911 1581 aa20.57■□□□□ 0.88
LMX1A-203ENST00000367893 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
LMX1A-203ENST00000367893 TSPOAP1O95153 1857 aa20.54■□□□□ 0.88
LMX1A-203ENST00000367893 WDR7Q9Y4E6 1490 aa20.54■□□□□ 0.88
LMX1A-203ENST00000367893 MAP3K4Q9Y6R4 1608 aa20.51■□□□□ 0.87
LMX1A-203ENST00000367893 COL17A1Q9UMD9 1497 aaPredicted RBP20.5■□□□□ 0.87
LMX1A-203ENST00000367893 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
LMX1A-203ENST00000367893 KDM4FA0A1W2PPD8 638 aa20.45■□□□□ 0.86
LMX1A-203ENST00000367893 SAMD9Q5K651 1589 aa20.45■□□□□ 0.86
LMX1A-203ENST00000367893 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
LMX1A-203ENST00000367893 TEX14Q8IWB6 1497 aa20.44■□□□□ 0.86
LMX1A-203ENST00000367893 ATP10BO94823 1461 aa20.42■□□□□ 0.86
LMX1A-203ENST00000367893 EFCAB5A4FU69 1503 aa20.41■□□□□ 0.86
LMX1A-203ENST00000367893 CLIP1P30622 1438 aa20.41■□□□□ 0.86
LMX1A-203ENST00000367893 MAGI3Q5TCQ9 1506 aa20.39■□□□□ 0.86
LMX1A-203ENST00000367893 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
LMX1A-203ENST00000367893 CD109Q6YHK3 1445 aa20.39■□□□□ 0.85
LMX1A-203ENST00000367893 ARHGAP35Q9NRY4 1499 aa20.39■□□□□ 0.85
LMX1A-203ENST00000367893 ARID3CA6NKF2 412 aa20.36■□□□□ 0.85
LMX1A-203ENST00000367893 FHOD3Q2V2M9 1422 aa20.33■□□□□ 0.84
LMX1A-203ENST00000367893 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.84
LMX1A-203ENST00000367893 RANGAP1P46060 587 aaPredicted RBP20.31■□□□□ 0.84
LMX1A-203ENST00000367893 NUP153P49790 1475 aaKnown RBP20.31■□□□□ 0.84
LMX1A-203ENST00000367893 RAPGEF6Q8TEU7 1601 aa20.3■□□□□ 0.84
LMX1A-203ENST00000367893 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
LMX1A-203ENST00000367893 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
LMX1A-203ENST00000367893 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
LMX1A-203ENST00000367893 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
LMX1A-203ENST00000367893 PHLDB1Q86UU1 1377 aa20.18■□□□□ 0.82
LMX1A-203ENST00000367893 VPS8Q8N3P4 1428 aa20.18■□□□□ 0.82
LMX1A-203ENST00000367893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
LMX1A-203ENST00000367893 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
LMX1A-203ENST00000367893 NEO1Q92859 1461 aa20.15■□□□□ 0.82
LMX1A-203ENST00000367893 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
LMX1A-203ENST00000367893 RAPGEF3O95398 923 aa20.11■□□□□ 0.81
LMX1A-203ENST00000367893 CASKIN1Q8WXD9 1431 aa20.1■□□□□ 0.81
LMX1A-203ENST00000367893 PCF11O94913 1555 aaKnown RBP20.1■□□□□ 0.81
LMX1A-203ENST00000367893 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
LMX1A-203ENST00000367893 FYCO1Q9BQS8 1478 aa20.09■□□□□ 0.81
LMX1A-203ENST00000367893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.08■□□□□ 0.81
LMX1A-203ENST00000367893 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
LMX1A-203ENST00000367893 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
LMX1A-203ENST00000367893 TTC37Q6PGP7 1564 aa20.04■□□□□ 0.8
LMX1A-203ENST00000367893 LRRIQ1Q96JM4 1722 aa20.03■□□□□ 0.8
LMX1A-203ENST00000367893 AKNAQ7Z591 1439 aa20.03■□□□□ 0.8
LMX1A-203ENST00000367893 FANCAO15360 1455 aa20.02■□□□□ 0.8
LMX1A-203ENST00000367893 DENND4BO75064 1496 aaPredicted RBP20■□□□□ 0.79
LMX1A-203ENST00000367893 MAP3K1Q13233 1512 aa19.98■□□□□ 0.79
LMX1A-203ENST00000367893 PLCH2O75038 1416 aa19.97■□□□□ 0.79
LMX1A-203ENST00000367893 CCDC18Q5T9S5 1454 aa19.96■□□□□ 0.79
LMX1A-203ENST00000367893 ATP1B4Q9UN42 357 aaPredicted RBP19.95■□□□□ 0.78
LMX1A-203ENST00000367893 ARHGEF40Q8TER5 1519 aa19.94■□□□□ 0.78
LMX1A-203ENST00000367893 TIAM1Q13009 1591 aa19.94■□□□□ 0.78
LMX1A-203ENST00000367893 CFAP74Q9C0B2 1584 aa19.94■□□□□ 0.78
LMX1A-203ENST00000367893 RICTORQ6R327 1708 aa19.94■□□□□ 0.78
LMX1A-203ENST00000367893 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
LMX1A-203ENST00000367893 TROQ12816 1431 aaPredicted RBP19.93■□□□□ 0.78
LMX1A-203ENST00000367893 ZMYM4Q5VZL5 1548 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms