RNA–Protein interactions for RNA: ENST00000367482.8

PRG4-201, Transcript of proteoglycan 4, humanhuman

TSL 5

Gene PRG4, Length 2,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRG4-201ENST00000367482 EEA1Q15075 1411 aa15.05■□□□□ -0
PRG4-201ENST00000367482 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
PRG4-201ENST00000367482 NACADO15069 1562 aa15.02■□□□□ -0
PRG4-201ENST00000367482 CEP162Q5TB80 1403 aa15.02□□□□□ -0.01
PRG4-201ENST00000367482 TAF7LQ5H9L4 462 aa15.01□□□□□ -0.01
PRG4-201ENST00000367482 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
PRG4-201ENST00000367482 HSP90AA1P07900 732 aaKnown RBP14.98□□□□□ -0.01
PRG4-201ENST00000367482 LAS1LQ9Y4W2 734 aaKnown RBP14.96□□□□□ -0.01
PRG4-201ENST00000367482 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
PRG4-201ENST00000367482 B4GALNT3Q6L9W6 998 aa14.95□□□□□ -0.02
PRG4-201ENST00000367482 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
PRG4-201ENST00000367482 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
PRG4-201ENST00000367482 CENPJQ9HC77 1338 aaPredicted RBP14.9□□□□□ -0.02
PRG4-201ENST00000367482 PRDM4Q9UKN5 801 aa14.9□□□□□ -0.02
PRG4-201ENST00000367482 ANP32CO43423 234 aa14.9□□□□□ -0.02
PRG4-201ENST00000367482 DDX10Q13206 875 aaKnown RBP14.9□□□□□ -0.02
PRG4-201ENST00000367482 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
PRG4-201ENST00000367482 ABCC9O60706 1549 aa14.89□□□□□ -0.03
PRG4-201ENST00000367482 KLHL34Q8N239 644 aa14.88□□□□□ -0.03
PRG4-201ENST00000367482 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
PRG4-201ENST00000367482 NAP1L5Q96NT1 182 aaPredicted RBP14.86□□□□□ -0.03
PRG4-201ENST00000367482 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
PRG4-201ENST00000367482 RRAGDQ9NQL2 400 aaPredicted RBP14.85□□□□□ -0.03
PRG4-201ENST00000367482 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
PRG4-201ENST00000367482 DCAF11Q8TEB1 546 aa14.83□□□□□ -0.03
PRG4-201ENST00000367482 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
PRG4-201ENST00000367482 NCAPD3P42695 1498 aa14.83□□□□□ -0.04
PRG4-201ENST00000367482 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
PRG4-201ENST00000367482 NFKBIBQ15653 356 aa14.81□□□□□ -0.04
PRG4-201ENST00000367482 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
PRG4-201ENST00000367482 ARXQ96QS3 562 aa14.8□□□□□ -0.04
PRG4-201ENST00000367482 NAP1L2Q9ULW6 460 aaPredicted RBP14.79□□□□□ -0.04
PRG4-201ENST00000367482 ZNF326Q5BKZ1 582 aaKnown RBP14.78□□□□□ -0.04
PRG4-201ENST00000367482 PDCL3Q9H2J4 239 aa14.78□□□□□ -0.04
PRG4-201ENST00000367482 RGS3P49796 1198 aa14.76□□□□□ -0.05
PRG4-201ENST00000367482 CLCN1P35523 988 aa14.75□□□□□ -0.05
PRG4-201ENST00000367482 RSPH4AQ5TD94 716 aa14.75□□□□□ -0.05
PRG4-201ENST00000367482 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
PRG4-201ENST00000367482 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
PRG4-201ENST00000367482 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
PRG4-201ENST00000367482 DDRGK1Q96HY6 314 aa14.74□□□□□ -0.05
PRG4-201ENST00000367482 GTF2E1P29083 439 aaPredicted RBP14.71□□□□□ -0.06
PRG4-201ENST00000367482 IPO4Q8TEX9 1081 aaKnown RBP14.7□□□□□ -0.06
PRG4-201ENST00000367482 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
PRG4-201ENST00000367482 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
PRG4-201ENST00000367482 TPM2P07951 284 aa14.67□□□□□ -0.06
PRG4-201ENST00000367482 L1TD1Q5T7N2 865 aaKnown RBP14.67□□□□□ -0.06
PRG4-201ENST00000367482 PAXIP1Q6ZW49 1069 aaPredicted RBP14.67□□□□□ -0.06
PRG4-201ENST00000367482 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
PRG4-201ENST00000367482 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
PRG4-201ENST00000367482 CUX2O14529 1486 aa14.65□□□□□ -0.06
PRG4-201ENST00000367482 STAC3Q96MF2 364 aa14.65□□□□□ -0.06
PRG4-201ENST00000367482 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
PRG4-201ENST00000367482 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
PRG4-201ENST00000367482 PDE4AP27815 886 aa14.62□□□□□ -0.07
PRG4-201ENST00000367482 CNGB1Q14028 1251 aaPredicted RBP14.62□□□□□ -0.07
PRG4-201ENST00000367482 BACH2Q9BYV9 841 aa14.62□□□□□ -0.07
PRG4-201ENST00000367482 MS4A1P11836 297 aa14.61□□□□□ -0.07
PRG4-201ENST00000367482 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
PRG4-201ENST00000367482 SMAP1Q8IYB5 467 aaPredicted RBP14.6□□□□□ -0.07
PRG4-201ENST00000367482 SMARCA2P51531 1590 aa14.59□□□□□ -0.07
PRG4-201ENST00000367482 SIN3AQ96ST3 1273 aa14.59□□□□□ -0.07
PRG4-201ENST00000367482 RNF123Q5XPI4 1314 aa14.58□□□□□ -0.08
PRG4-201ENST00000367482 MAPKBP1O60336 1514 aa14.56□□□□□ -0.08
PRG4-201ENST00000367482 VPS8Q8N3P4 1428 aa14.56□□□□□ -0.08
PRG4-201ENST00000367482 FRAT2O75474 233 aaPredicted RBP14.56□□□□□ -0.08
PRG4-201ENST00000367482 MAP7D2Q96T17 732 aa14.55□□□□□ -0.08
PRG4-201ENST00000367482 BRD2P25440 801 aaKnown RBP14.55□□□□□ -0.08
PRG4-201ENST00000367482 GOLGA3Q08378 1498 aa14.54□□□□□ -0.08
PRG4-201ENST00000367482 CEP164Q9UPV0 1460 aa14.53□□□□□ -0.08
PRG4-201ENST00000367482 SMG6Q86US8 1419 aaKnown RBP14.52□□□□□ -0.08
PRG4-201ENST00000367482 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
PRG4-201ENST00000367482 CLIP1P30622 1438 aa14.52□□□□□ -0.09
PRG4-201ENST00000367482 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
PRG4-201ENST00000367482 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
PRG4-201ENST00000367482 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
PRG4-201ENST00000367482 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
PRG4-201ENST00000367482 AKNAQ7Z591 1439 aa14.47□□□□□ -0.09
PRG4-201ENST00000367482 FTSJ3Q8IY81 847 aaKnown RBP14.47□□□□□ -0.09
PRG4-201ENST00000367482 BAZ1BQ9UIG0 1483 aaKnown RBP14.46□□□□□ -0.09
PRG4-201ENST00000367482 POGKQ9P215 609 aa14.46□□□□□ -0.09
PRG4-201ENST00000367482 ZHX1Q9UKY1 873 aaPredicted RBP14.45□□□□□ -0.1
PRG4-201ENST00000367482 RRBP1Q9P2E9 1410 aaKnown RBP14.44□□□□□ -0.1
PRG4-201ENST00000367482 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
PRG4-201ENST00000367482 ESPNB1AK53 854 aa14.43□□□□□ -0.1
PRG4-201ENST00000367482 XRCC6P12956 609 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRG4-201ENST00000367482 TMEM51Q9NW97 253 aa14.43□□□□□ -0.1
PRG4-201ENST00000367482 DMTNQ08495 405 aa14.43□□□□□ -0.1
PRG4-201ENST00000367482 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
PRG4-201ENST00000367482 SLC4A3P48751 1232 aa14.42□□□□□ -0.1
PRG4-201ENST00000367482 NUDCQ9Y266 331 aa14.42□□□□□ -0.1
PRG4-201ENST00000367482 TERF1P54274 439 aa14.41□□□□□ -0.1
PRG4-201ENST00000367482 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
PRG4-201ENST00000367482 HIRIP3Q9BW71 556 aaPredicted RBP14.41□□□□□ -0.1
PRG4-201ENST00000367482 FSD2A1L4K1 749 aa14.41□□□□□ -0.1
PRG4-201ENST00000367482 GOLGA6L3A6NEY3 463 aa14.4□□□□□ -0.1
PRG4-201ENST00000367482 MTERF4Q7Z6M4 381 aaKnown RBP14.4□□□□□ -0.1
PRG4-201ENST00000367482 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
PRG4-201ENST00000367482 CHRM1P11229 460 aaPredicted RBP14.4□□□□□ -0.1
PRG4-201ENST00000367482 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms