RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 NBR1Q14596 966 aa15.43■□□□□ 0.06
RD3-201ENST00000367002 KIF27Q86VH2 1401 aa15.43■□□□□ 0.06
RD3-201ENST00000367002 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
RD3-201ENST00000367002 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
RD3-201ENST00000367002 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
RD3-201ENST00000367002 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
RD3-201ENST00000367002 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
RD3-201ENST00000367002 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
RD3-201ENST00000367002 WDR43Q15061 677 aaKnown RBP eCLIP15.34■□□□□ 0.05
RD3-201ENST00000367002 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
RD3-201ENST00000367002 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
RD3-201ENST00000367002 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
RD3-201ENST00000367002 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
RD3-201ENST00000367002 RGL3Q3MIN7 710 aa15.3■□□□□ 0.04
RD3-201ENST00000367002 KANK4Q5T7N3 995 aaPredicted RBP15.3■□□□□ 0.04
RD3-201ENST00000367002 ANP32EQ9BTT0 268 aa15.3■□□□□ 0.04
RD3-201ENST00000367002 CCDC88BA6NC98 1476 aa15.29■□□□□ 0.04
RD3-201ENST00000367002 EIF5BO60841 1220 aaKnown RBP15.29■□□□□ 0.04
RD3-201ENST00000367002 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
RD3-201ENST00000367002 HSP90AA1P07900 732 aaKnown RBP15.27■□□□□ 0.04
RD3-201ENST00000367002 PLEKHD1A6NEE1 506 aa15.27■□□□□ 0.03
RD3-201ENST00000367002 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.03
RD3-201ENST00000367002 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
RD3-201ENST00000367002 ABCC8Q09428 1581 aa15.24■□□□□ 0.03
RD3-201ENST00000367002 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
RD3-201ENST00000367002 CARD11Q9BXL7 1154 aa15.23■□□□□ 0.03
RD3-201ENST00000367002 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
RD3-201ENST00000367002 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
RD3-201ENST00000367002 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
RD3-201ENST00000367002 KCNH8Q96L42 1107 aa15.2■□□□□ 0.02
RD3-201ENST00000367002 FHAD1B1AJZ9 1412 aa15.19■□□□□ 0.02
RD3-201ENST00000367002 B4GALNT3Q6L9W6 998 aa15.18■□□□□ 0.02
RD3-201ENST00000367002 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
RD3-201ENST00000367002 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
RD3-201ENST00000367002 ARXQ96QS3 562 aa15.16■□□□□ 0.02
RD3-201ENST00000367002 SETD5Q9C0A6 1442 aa15.16■□□□□ 0.02
RD3-201ENST00000367002 CUX2O14529 1486 aa15.16■□□□□ 0.02
RD3-201ENST00000367002 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
RD3-201ENST00000367002 KNSTRNQ9Y448 316 aa15.13■□□□□ 0.01
RD3-201ENST00000367002 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
RD3-201ENST00000367002 HSPA5P11021 654 aaKnown RBP15.1■□□□□ 0.01
RD3-201ENST00000367002 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
RD3-201ENST00000367002 SENP3Q9H4L4 574 aaPredicted RBP15.09■□□□□ 0.01
RD3-201ENST00000367002 PPP1R15AO75807 674 aaPredicted RBP15.09■□□□□ 0.01
RD3-201ENST00000367002 DDRGK1Q96HY6 314 aa15.09■□□□□ 0.01
RD3-201ENST00000367002 CDCA8Q53HL2 280 aa15.07■□□□□ 0
RD3-201ENST00000367002 FOXD1Q16676 465 aa15.06■□□□□ 0
RD3-201ENST00000367002 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
RD3-201ENST00000367002 NEUROD2Q15784 382 aa15.04■□□□□ -0
RD3-201ENST00000367002 CC2D1BQ5T0F9 858 aaKnown RBP15.04■□□□□ -0
RD3-201ENST00000367002 NOP58Q9Y2X3 529 aaKnown RBP15.03■□□□□ -0
RD3-201ENST00000367002 WIZO95785 1651 aa15.03■□□□□ -0
RD3-201ENST00000367002 BECN1Q14457 450 aa15.03■□□□□ -0
RD3-201ENST00000367002 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
RD3-201ENST00000367002 RGS3P49796 1198 aa15.02□□□□□ -0.01
RD3-201ENST00000367002 LAS1LQ9Y4W2 734 aaKnown RBP15.02□□□□□ -0.01
RD3-201ENST00000367002 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
RD3-201ENST00000367002 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
RD3-201ENST00000367002 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
RD3-201ENST00000367002 RUSC2Q8N2Y8 1516 aa15□□□□□ -0.01
RD3-201ENST00000367002 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
RD3-201ENST00000367002 RAPGEF2Q9Y4G8 1499 aa14.99□□□□□ -0.01
RD3-201ENST00000367002 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
RD3-201ENST00000367002 MYH16Q9H6N6 1097 aa14.98□□□□□ -0.01
RD3-201ENST00000367002 PKD2Q13563 968 aa14.98□□□□□ -0.01
RD3-201ENST00000367002 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
RD3-201ENST00000367002 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.01
RD3-201ENST00000367002 FRAT1Q92837 279 aaPredicted RBP14.95□□□□□ -0.02
RD3-201ENST00000367002 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
RD3-201ENST00000367002 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
RD3-201ENST00000367002 TMF1P82094 1093 aa14.94□□□□□ -0.02
RD3-201ENST00000367002 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
RD3-201ENST00000367002 ERICH6BQ5W0A0 696 aa14.94□□□□□ -0.02
RD3-201ENST00000367002 FTSJ3Q8IY81 847 aaKnown RBP14.93□□□□□ -0.02
RD3-201ENST00000367002 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
RD3-201ENST00000367002 FMN1Q68DA7 1419 aa14.9□□□□□ -0.02
RD3-201ENST00000367002 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
RD3-201ENST00000367002 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
RD3-201ENST00000367002 GLIPR1L2Q4G1C9 344 aa14.87□□□□□ -0.03
RD3-201ENST00000367002 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
RD3-201ENST00000367002 FHOD3Q2V2M9 1422 aa14.87□□□□□ -0.03
RD3-201ENST00000367002 MAPK8IP3Q9UPT6 1336 aa14.86□□□□□ -0.03
RD3-201ENST00000367002 DEKP35659 375 aaKnown RBP14.86□□□□□ -0.03
RD3-201ENST00000367002 RCAN3Q9UKA8 241 aa14.86□□□□□ -0.03
RD3-201ENST00000367002 TRIM44Q96DX7 344 aaPredicted RBP14.85□□□□□ -0.03
RD3-201ENST00000367002 GOLGA6L22H0YM25 854 aa14.84□□□□□ -0.03
RD3-201ENST00000367002 NUP155O75694 1391 aa14.84□□□□□ -0.03
RD3-201ENST00000367002 U2SURPO15042 1029 aaKnown RBP14.84□□□□□ -0.03
RD3-201ENST00000367002 KTN1Q86UP2 1357 aaKnown RBP14.82□□□□□ -0.04
RD3-201ENST00000367002 POGKQ9P215 609 aa14.81□□□□□ -0.04
RD3-201ENST00000367002 RALBP1Q15311 655 aa14.81□□□□□ -0.04
RD3-201ENST00000367002 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
RD3-201ENST00000367002 NCLP19338 710 aaKnown RBP14.8□□□□□ -0.04
RD3-201ENST00000367002 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
RD3-201ENST00000367002 CADPSQ9ULU8 1353 aa14.8□□□□□ -0.04
RD3-201ENST00000367002 C14orf37Q86TY3 774 aa14.78□□□□□ -0.04
RD3-201ENST00000367002 MORC1Q86VD1 984 aa14.77□□□□□ -0.04
RD3-201ENST00000367002 ROCK2O75116 1388 aaKnown RBP14.77□□□□□ -0.04
RD3-201ENST00000367002 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.05
RD3-201ENST00000367002 MS4A1P11836 297 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms