RNA–Protein interactions for RNA: ENST00000366553.2

CHML-201, Transcript of CHM like, Rab escort protein 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CHML, Length 7,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-201ENST00000366553 KIF27Q86VH2 1401 aa15.36■□□□□ 0.05
CHML-201ENST00000366553 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
CHML-201ENST00000366553 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
CHML-201ENST00000366553 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
CHML-201ENST00000366553 NEFMP07197 916 aa15.33■□□□□ 0.04
CHML-201ENST00000366553 CCDC136Q96JN2 1154 aa15.32■□□□□ 0.04
CHML-201ENST00000366553 SIN3AQ96ST3 1273 aa15.32■□□□□ 0.04
CHML-201ENST00000366553 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
CHML-201ENST00000366553 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
CHML-201ENST00000366553 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
CHML-201ENST00000366553 NBR1Q14596 966 aa15.29■□□□□ 0.04
CHML-201ENST00000366553 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
CHML-201ENST00000366553 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
CHML-201ENST00000366553 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
CHML-201ENST00000366553 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
CHML-201ENST00000366553 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.035e-6■□□□□ 10.2
CHML-201ENST00000366553 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
CHML-201ENST00000366553 KCNH8Q96L42 1107 aa15.21■□□□□ 0.03
CHML-201ENST00000366553 CCNB3Q8WWL7 1395 aa15.2■□□□□ 0.02
CHML-201ENST00000366553 CUX2O14529 1486 aa15.17■□□□□ 0.02
CHML-201ENST00000366553 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHML-201ENST00000366553 KANK4Q5T7N3 995 aaPredicted RBP15.16■□□□□ 0.02
CHML-201ENST00000366553 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
CHML-201ENST00000366553 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
CHML-201ENST00000366553 CFDP1Q9UEE9 299 aaPredicted RBP15.14■□□□□ 0.01
CHML-201ENST00000366553 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
CHML-201ENST00000366553 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
CHML-201ENST00000366553 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
CHML-201ENST00000366553 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
CHML-201ENST00000366553 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
CHML-201ENST00000366553 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.11■□□□□ 0.01
CHML-201ENST00000366553 UPF2Q9HAU5 1272 aaKnown RBP15.1■□□□□ 0.01
CHML-201ENST00000366553 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
CHML-201ENST00000366553 ARXQ96QS3 562 aa15.08■□□□□ 0
CHML-201ENST00000366553 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
CHML-201ENST00000366553 SMARCA2P51531 1590 aa15.07■□□□□ 0
CHML-201ENST00000366553 SMARCA4P51532 1647 aa15.06■□□□□ 0
CHML-201ENST00000366553 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
CHML-201ENST00000366553 SETD5Q9C0A6 1442 aa15.05■□□□□ -0
CHML-201ENST00000366553 FOXD1Q16676 465 aa15.03■□□□□ -0
CHML-201ENST00000366553 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
CHML-201ENST00000366553 EIF5BO60841 1220 aaKnown RBP15.02□□□□□ -0.01
CHML-201ENST00000366553 ERCC6Q03468 1493 aa15□□□□□ -0.01
CHML-201ENST00000366553 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
CHML-201ENST00000366553 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
CHML-201ENST00000366553 CC2D1BQ5T0F9 858 aaKnown RBP14.99□□□□□ -0.01
CHML-201ENST00000366553 B4GALNT3Q6L9W6 998 aa14.98□□□□□ -0.01
CHML-201ENST00000366553 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
CHML-201ENST00000366553 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
CHML-201ENST00000366553 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
CHML-201ENST00000366553 HSPA5P11021 654 aaKnown RBP14.93□□□□□ -0.02
CHML-201ENST00000366553 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
CHML-201ENST00000366553 ANP32EQ9BTT0 268 aa14.93□□□□□ -0.02
CHML-201ENST00000366553 ANP32BQ92688 251 aaKnown RBP14.93□□□□□ -0.02
CHML-201ENST00000366553 PPP4R2Q9NY27 417 aa14.92□□□□□ -0.02
CHML-201ENST00000366553 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
CHML-201ENST00000366553 PPM1GO15355 546 aaPredicted RBP14.9□□□□□ -0.02
CHML-201ENST00000366553 TDRD9Q8NDG6 1382 aaKnown RBP14.88□□□□□ -0.03
CHML-201ENST00000366553 FHOD3Q2V2M9 1422 aa14.86□□□□□ -0.03
CHML-201ENST00000366553 CDCA8Q53HL2 280 aa14.86□□□□□ -0.03
CHML-201ENST00000366553 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
CHML-201ENST00000366553 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
CHML-201ENST00000366553 CCER2I3L3R5 266 aa14.85□□□□□ -0.03
CHML-201ENST00000366553 PPP1R15AO75807 674 aaPredicted RBP14.85□□□□□ -0.03
CHML-201ENST00000366553 MPHOSPH9Q99550 1183 aa14.84□□□□□ -0.03
CHML-201ENST00000366553 MYH16Q9H6N6 1097 aa14.84□□□□□ -0.03
CHML-201ENST00000366553 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
CHML-201ENST00000366553 LAS1LQ9Y4W2 734 aaKnown RBP14.84□□□□□ -0.03
CHML-201ENST00000366553 PKD2Q13563 968 aa14.83□□□□□ -0.04
CHML-201ENST00000366553 ATAD2BQ9ULI0 1458 aa14.83□□□□□ -0.04
CHML-201ENST00000366553 RGS3P49796 1198 aa14.83□□□□□ -0.04
CHML-201ENST00000366553 C14orf37Q86TY3 774 aa14.82□□□□□ -0.04
CHML-201ENST00000366553 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
CHML-201ENST00000366553 CFAP53Q96M91 514 aa14.82□□□□□ -0.04
CHML-201ENST00000366553 FMN1Q68DA7 1419 aa14.81□□□□□ -0.04
CHML-201ENST00000366553 FTSJ3Q8IY81 847 aaKnown RBP14.81□□□□□ -0.04
CHML-201ENST00000366553 BECN1Q14457 450 aa14.8□□□□□ -0.04
CHML-201ENST00000366553 RBM19Q9Y4C8 960 aaKnown RBP14.8□□□□□ -0.04
CHML-201ENST00000366553 TMF1P82094 1093 aa14.79□□□□□ -0.04
CHML-201ENST00000366553 NOP58Q9Y2X3 529 aaKnown RBP14.78□□□□□ -0.04
CHML-201ENST00000366553 DHX57Q6P158 1386 aaKnown RBP14.77□□□□□ -0.04
CHML-201ENST00000366553 U2SURPO15042 1029 aaKnown RBP14.74□□□□□ -0.05
CHML-201ENST00000366553 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
CHML-201ENST00000366553 POGKQ9P215 609 aa14.74□□□□□ -0.05
CHML-201ENST00000366553 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
CHML-201ENST00000366553 ROCK2O75116 1388 aaKnown RBP14.74□□□□□ -0.05
CHML-201ENST00000366553 PRDM2Q13029 1718 aa14.73□□□□□ -0.05
CHML-201ENST00000366553 L3MBTL2Q969R5 705 aa14.73□□□□□ -0.05
CHML-201ENST00000366553 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHML-201ENST00000366553 NUP155O75694 1391 aa14.72□□□□□ -0.05
CHML-201ENST00000366553 CADPSQ9ULU8 1353 aa14.72□□□□□ -0.05
CHML-201ENST00000366553 MAPK8IP3Q9UPT6 1336 aa14.72□□□□□ -0.05
CHML-201ENST00000366553 HNRNPMP52272 730 aaKnown RBP eCLIP14.7□□□□□ -0.06
CHML-201ENST00000366553 RTN4Q9NQC3 1192 aaKnown RBP14.7□□□□□ -0.06
CHML-201ENST00000366553 TPRNQ4KMQ1 711 aa14.69□□□□□ -0.06
CHML-201ENST00000366553 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
CHML-201ENST00000366553 KANK1Q14678 1352 aa14.68□□□□□ -0.06
CHML-201ENST00000366553 CARMIL2Q6F5E8 1435 aa14.68□□□□□ -0.06
CHML-201ENST00000366553 KTN1Q86UP2 1357 aaKnown RBP14.68□□□□□ -0.06
CHML-201ENST00000366553 NUDCQ9Y266 331 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms