RNA–Protein interactions for RNA: ENST00000366525.8

HNRNPU-202, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,851 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-202ENST00000366525 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
HNRNPU-202ENST00000366525 SIN3AQ96ST3 1273 aa13.69□□□□□ -0.22
HNRNPU-202ENST00000366525 NBR1Q14596 966 aa13.67□□□□□ -0.22
HNRNPU-202ENST00000366525 HNRNPUQ00839 825 aaKnown RBP eCLIP13.64□□□□□ -0.23
HNRNPU-202ENST00000366525 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
HNRNPU-202ENST00000366525 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-202ENST00000366525 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
HNRNPU-202ENST00000366525 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
HNRNPU-202ENST00000366525 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
HNRNPU-202ENST00000366525 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
HNRNPU-202ENST00000366525 ERICH6BQ5W0A0 696 aa13.56□□□□□ -0.24
HNRNPU-202ENST00000366525 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
HNRNPU-202ENST00000366525 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
HNRNPU-202ENST00000366525 ERICH3Q5RHP9 1530 aa13.53□□□□□ -0.24
HNRNPU-202ENST00000366525 TIMELESSQ9UNS1 1208 aa13.52□□□□□ -0.25
HNRNPU-202ENST00000366525 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
HNRNPU-202ENST00000366525 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
HNRNPU-202ENST00000366525 RTL5Q5HYW3 569 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-202ENST00000366525 FAM50AQ14320 339 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-202ENST00000366525 ARHGAP35Q9NRY4 1499 aa13.46□□□□□ -0.25
HNRNPU-202ENST00000366525 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.46□□□□□ -0.26
HNRNPU-202ENST00000366525 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
HNRNPU-202ENST00000366525 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
HNRNPU-202ENST00000366525 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-202ENST00000366525 PHLDB1Q86UU1 1377 aa13.43□□□□□ -0.26
HNRNPU-202ENST00000366525 TONSLQ96HA7 1378 aa13.43□□□□□ -0.26
HNRNPU-202ENST00000366525 ANP32AP39687 249 aaKnown RBP13.42□□□□□ -0.26
HNRNPU-202ENST00000366525 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
HNRNPU-202ENST00000366525 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
HNRNPU-202ENST00000366525 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
HNRNPU-202ENST00000366525 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
HNRNPU-202ENST00000366525 LRRC9Q6ZRR7 1453 aa13.37□□□□□ -0.27
HNRNPU-202ENST00000366525 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
HNRNPU-202ENST00000366525 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
HNRNPU-202ENST00000366525 PEG3Q9GZU2 1588 aa13.36□□□□□ -0.27
HNRNPU-202ENST00000366525 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
HNRNPU-202ENST00000366525 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
HNRNPU-202ENST00000366525 FHAD1B1AJZ9 1412 aa13.34□□□□□ -0.27
HNRNPU-202ENST00000366525 MAP3K1Q13233 1512 aa13.33□□□□□ -0.28
HNRNPU-202ENST00000366525 HSPA5P11021 654 aaKnown RBP13.32□□□□□ -0.28
HNRNPU-202ENST00000366525 MRS2Q9HD23 443 aa13.32□□□□□ -0.28
HNRNPU-202ENST00000366525 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
HNRNPU-202ENST00000366525 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
HNRNPU-202ENST00000366525 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
HNRNPU-202ENST00000366525 NEFMP07197 916 aa13.29□□□□□ -0.28
HNRNPU-202ENST00000366525 PRKRIP1Q9H875 184 aaPredicted RBP13.29□□□□□ -0.28
HNRNPU-202ENST00000366525 CNTLNQ9NXG0 1405 aa13.29□□□□□ -0.28
HNRNPU-202ENST00000366525 KDM5BQ9UGL1 1544 aa13.28□□□□□ -0.28
HNRNPU-202ENST00000366525 NPM2Q86SE8 214 aaKnown RBP13.28□□□□□ -0.28
HNRNPU-202ENST00000366525 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
HNRNPU-202ENST00000366525 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
HNRNPU-202ENST00000366525 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
HNRNPU-202ENST00000366525 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
HNRNPU-202ENST00000366525 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
HNRNPU-202ENST00000366525 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
HNRNPU-202ENST00000366525 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
HNRNPU-202ENST00000366525 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
HNRNPU-202ENST00000366525 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
HNRNPU-202ENST00000366525 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 UACAQ9BZF9 1416 aa13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 CUX1P39880 1505 aa13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 CFAP43Q8NDM7 1665 aa13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 USP35Q9P2H5 1018 aa13.23□□□□□ -0.29
HNRNPU-202ENST00000366525 EIF4G2P78344 907 aaKnown RBP eCLIP13.22□□□□□ -0.29
HNRNPU-202ENST00000366525 EIF5BO60841 1220 aaKnown RBP13.22□□□□□ -0.29
HNRNPU-202ENST00000366525 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
HNRNPU-202ENST00000366525 NUDCQ9Y266 331 aa13.21□□□□□ -0.3
HNRNPU-202ENST00000366525 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.31e-7■■■■□ 25.3
HNRNPU-202ENST00000366525 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
HNRNPU-202ENST00000366525 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
HNRNPU-202ENST00000366525 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
HNRNPU-202ENST00000366525 CCDC7Q96M83 1385 aa13.19□□□□□ -0.3
HNRNPU-202ENST00000366525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
HNRNPU-202ENST00000366525 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
HNRNPU-202ENST00000366525 PTPN23Q9H3S7 1636 aa13.18□□□□□ -0.3
HNRNPU-202ENST00000366525 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
HNRNPU-202ENST00000366525 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
HNRNPU-202ENST00000366525 BICRAQ9NZM4 1560 aa13.16□□□□□ -0.3
HNRNPU-202ENST00000366525 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
HNRNPU-202ENST00000366525 PDE4AP27815 886 aa13.15□□□□□ -0.3
HNRNPU-202ENST00000366525 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
HNRNPU-202ENST00000366525 FGD6Q6ZV73 1430 aa13.15□□□□□ -0.3
HNRNPU-202ENST00000366525 NAIPQ13075 1403 aa13.14□□□□□ -0.31
HNRNPU-202ENST00000366525 GSE1Q14687 1217 aa13.14□□□□□ -0.31
HNRNPU-202ENST00000366525 IGF1RP08069 1367 aa13.13□□□□□ -0.31
HNRNPU-202ENST00000366525 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
HNRNPU-202ENST00000366525 BACH2Q9BYV9 841 aa13.12□□□□□ -0.31
HNRNPU-202ENST00000366525 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
HNRNPU-202ENST00000366525 FHOD3Q2V2M9 1422 aa13.1□□□□□ -0.31
HNRNPU-202ENST00000366525 L3MBTL2Q969R5 705 aa13.1□□□□□ -0.31
HNRNPU-202ENST00000366525 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
HNRNPU-202ENST00000366525 CARMIL1Q5VZK9 1371 aa13.09□□□□□ -0.31
HNRNPU-202ENST00000366525 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
HNRNPU-202ENST00000366525 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
HNRNPU-202ENST00000366525 NFKBIBQ15653 356 aa13.08□□□□□ -0.32
HNRNPU-202ENST00000366525 DENND4BO75064 1496 aaPredicted RBP13.07□□□□□ -0.32
HNRNPU-202ENST00000366525 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
HNRNPU-202ENST00000366525 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
HNRNPU-202ENST00000366525 NBPF8Q3BBV2 869 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms