RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FHAD1B1AJZ9 1412 aa19.77■□□□□ 0.76
CSNK1E-202ENST00000366216 KDM4FA0A1W2PPD8 638 aa19.77■□□□□ 0.76
CSNK1E-202ENST00000366216 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
CSNK1E-202ENST00000366216 BIVM-ERCC5R4GMW8 1640 aa19.76■□□□□ 0.75
CSNK1E-202ENST00000366216 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
CSNK1E-202ENST00000366216 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
CSNK1E-202ENST00000366216 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
CSNK1E-202ENST00000366216 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
CSNK1E-202ENST00000366216 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
CSNK1E-202ENST00000366216 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
CSNK1E-202ENST00000366216 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
CSNK1E-202ENST00000366216 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
CSNK1E-202ENST00000366216 SUPT5HO00267 1087 aaKnown RBP19.64■□□□□ 0.73
CSNK1E-202ENST00000366216 PPRC1Q5VV67 1664 aaKnown RBP19.57■□□□□ 0.72
CSNK1E-202ENST00000366216 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
CSNK1E-202ENST00000366216 HECW2Q9P2P5 1572 aa19.52■□□□□ 0.71
CSNK1E-202ENST00000366216 CUL7Q14999 1698 aa19.47■□□□□ 0.71
CSNK1E-202ENST00000366216 GLI2P10070 1586 aa19.44■□□□□ 0.7
CSNK1E-202ENST00000366216 KIAA0586Q9BVV6 1533 aa19.44■□□□□ 0.7
CSNK1E-202ENST00000366216 MAP3K4Q9Y6R4 1608 aa19.39■□□□□ 0.69
CSNK1E-202ENST00000366216 ABCC2Q92887 1545 aa19.38■□□□□ 0.69
CSNK1E-202ENST00000366216 ASXL2Q76L83 1435 aa19.36■□□□□ 0.69
CSNK1E-202ENST00000366216 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
CSNK1E-202ENST00000366216 COL17A1Q9UMD9 1497 aaPredicted RBP19.35■□□□□ 0.69
CSNK1E-202ENST00000366216 IGF1RP08069 1367 aa19.35■□□□□ 0.69
CSNK1E-202ENST00000366216 PTPRGP23470 1445 aa19.34■□□□□ 0.69
CSNK1E-202ENST00000366216 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
CSNK1E-202ENST00000366216 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
CSNK1E-202ENST00000366216 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
CSNK1E-202ENST00000366216 TTBK1Q5TCY1 1321 aaPredicted RBP19.27■□□□□ 0.68
CSNK1E-202ENST00000366216 TNIKQ9UKE5 1360 aa19.27■□□□□ 0.68
CSNK1E-202ENST00000366216 ZCCHC11Q5TAX3 1644 aaKnown RBP19.26■□□□□ 0.67
CSNK1E-202ENST00000366216 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
CSNK1E-202ENST00000366216 EPRSP07814 1512 aaKnown RBP19.25■□□□□ 0.67
CSNK1E-202ENST00000366216 IQGAP2Q13576 1575 aa19.24■□□□□ 0.67
CSNK1E-202ENST00000366216 KIF27Q86VH2 1401 aa19.2■□□□□ 0.66
CSNK1E-202ENST00000366216 UACAQ9BZF9 1416 aa19.2■□□□□ 0.66
CSNK1E-202ENST00000366216 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
CSNK1E-202ENST00000366216 FBXO41Q8TF61 875 aa19.18■□□□□ 0.66
CSNK1E-202ENST00000366216 KIF21BO75037 1637 aa19.18■□□□□ 0.66
CSNK1E-202ENST00000366216 DISP1Q96F81 1524 aa19.16■□□□□ 0.66
CSNK1E-202ENST00000366216 CFAP43Q8NDM7 1665 aa19.16■□□□□ 0.66
CSNK1E-202ENST00000366216 CARMIL1Q5VZK9 1371 aa19.16■□□□□ 0.66
CSNK1E-202ENST00000366216 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
CSNK1E-202ENST00000366216 KIAA0556O60303 1618 aa19.07■□□□□ 0.64
CSNK1E-202ENST00000366216 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
CSNK1E-202ENST00000366216 MAGI3Q5TCQ9 1506 aa19.05■□□□□ 0.64
CSNK1E-202ENST00000366216 ADAMTSL3P82987 1691 aa19.03■□□□□ 0.64
CSNK1E-202ENST00000366216 CD109Q6YHK3 1445 aa19■□□□□ 0.63
CSNK1E-202ENST00000366216 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
CSNK1E-202ENST00000366216 PTPRMP28827 1452 aa18.97■□□□□ 0.63
CSNK1E-202ENST00000366216 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
CSNK1E-202ENST00000366216 BCORL1Q5H9F3 1711 aa18.94■□□□□ 0.62
CSNK1E-202ENST00000366216 PCF11O94913 1555 aaKnown RBP18.93■□□□□ 0.62
CSNK1E-202ENST00000366216 ABCA8O94911 1581 aa18.92■□□□□ 0.62
CSNK1E-202ENST00000366216 MADDQ8WXG6 1647 aa18.91■□□□□ 0.62
CSNK1E-202ENST00000366216 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
CSNK1E-202ENST00000366216 KCNH8Q96L42 1107 aa18.9■□□□□ 0.62
CSNK1E-202ENST00000366216 LMTK3Q96Q04 1460 aa18.9■□□□□ 0.62
CSNK1E-202ENST00000366216 RIMS1Q86UR5 1692 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-202ENST00000366216 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
CSNK1E-202ENST00000366216 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
CSNK1E-202ENST00000366216 GOLGA3Q08378 1498 aa18.83■□□□□ 0.6
CSNK1E-202ENST00000366216 FRMPD1Q5SYB0 1578 aa18.81■□□□□ 0.6
CSNK1E-202ENST00000366216 PHLDB1Q86UU1 1377 aa18.78■□□□□ 0.6
CSNK1E-202ENST00000366216 RICTORQ6R327 1708 aa18.74■□□□□ 0.59
CSNK1E-202ENST00000366216 ARID3CA6NKF2 412 aa18.74■□□□□ 0.59
CSNK1E-202ENST00000366216 ATP10BO94823 1461 aa18.73■□□□□ 0.59
CSNK1E-202ENST00000366216 NEO1Q92859 1461 aa18.73■□□□□ 0.59
CSNK1E-202ENST00000366216 ARHGEF40Q8TER5 1519 aa18.73■□□□□ 0.59
CSNK1E-202ENST00000366216 RAPGEF3O95398 923 aa18.72■□□□□ 0.59
CSNK1E-202ENST00000366216 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
CSNK1E-202ENST00000366216 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
CSNK1E-202ENST00000366216 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
CSNK1E-202ENST00000366216 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
CSNK1E-202ENST00000366216 HSPA2P54652 639 aa18.67■□□□□ 0.58
CSNK1E-202ENST00000366216 SOCS7O14512 581 aa18.66■□□□□ 0.58
CSNK1E-202ENST00000366216 ILDR2Q71H61 639 aa18.65■□□□□ 0.58
CSNK1E-202ENST00000366216 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
CSNK1E-202ENST00000366216 PRXQ9BXM0 1461 aa18.65■□□□□ 0.58
CSNK1E-202ENST00000366216 RAPGEF6Q8TEU7 1601 aa18.64■□□□□ 0.57
CSNK1E-202ENST00000366216 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
CSNK1E-202ENST00000366216 P3H3Q8IVL6 736 aa18.64■□□□□ 0.57
CSNK1E-202ENST00000366216 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
CSNK1E-202ENST00000366216 FANCAO15360 1455 aa18.61■□□□□ 0.57
CSNK1E-202ENST00000366216 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
CSNK1E-202ENST00000366216 TTC37Q6PGP7 1564 aa18.6■□□□□ 0.57
CSNK1E-202ENST00000366216 FAM9AQ8IZU1 332 aaPredicted RBP18.6■□□□□ 0.57
CSNK1E-202ENST00000366216 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
CSNK1E-202ENST00000366216 POGZQ7Z3K3 1410 aa18.58■□□□□ 0.57
CSNK1E-202ENST00000366216 ZMYM4Q5VZL5 1548 aa18.58■□□□□ 0.56
CSNK1E-202ENST00000366216 SAMD9Q5K651 1589 aa18.57■□□□□ 0.56
CSNK1E-202ENST00000366216 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
CSNK1E-202ENST00000366216 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
CSNK1E-202ENST00000366216 SETD1BQ9UPS6 1966 aaKnown RBP18.55■□□□□ 0.56
CSNK1E-202ENST00000366216 ZFYVE16Q7Z3T8 1539 aa18.55■□□□□ 0.56
CSNK1E-202ENST00000366216 FHOD3Q2V2M9 1422 aa18.54■□□□□ 0.56
CSNK1E-202ENST00000366216 AKNAQ7Z591 1439 aa18.54■□□□□ 0.56
CSNK1E-202ENST00000366216 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.55
CSNK1E-202ENST00000366216 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms