RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
RNU1-55P-201ENST00000365510 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
RNU1-55P-201ENST00000365510 SHROOM2Q13796 1616 aa11.26□□□□□ -0.61
RNU1-55P-201ENST00000365510 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNU1-55P-201ENST00000365510 IGF1RP08069 1367 aa11.22□□□□□ -0.61
RNU1-55P-201ENST00000365510 ERICH3Q5RHP9 1530 aa11.21□□□□□ -0.61
RNU1-55P-201ENST00000365510 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
RNU1-55P-201ENST00000365510 EEA1Q15075 1411 aa11.2□□□□□ -0.62
RNU1-55P-201ENST00000365510 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
RNU1-55P-201ENST00000365510 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
RNU1-55P-201ENST00000365510 ADCY10Q96PN6 1610 aa11.17□□□□□ -0.62
RNU1-55P-201ENST00000365510 RUSC2Q8N2Y8 1516 aa11.14□□□□□ -0.63
RNU1-55P-201ENST00000365510 PTPRGP23470 1445 aa11.13□□□□□ -0.63
RNU1-55P-201ENST00000365510 DIP2BQ9P265 1576 aa11.12□□□□□ -0.63
RNU1-55P-201ENST00000365510 FAM9AQ8IZU1 332 aaPredicted RBP11.12□□□□□ -0.63
RNU1-55P-201ENST00000365510 KIAA0586Q9BVV6 1533 aa11.12□□□□□ -0.63
RNU1-55P-201ENST00000365510 ILDR1Q86SU0 546 aaPredicted RBP11.11□□□□□ -0.63
RNU1-55P-201ENST00000365510 CARMIL1Q5VZK9 1371 aa11.11□□□□□ -0.63
RNU1-55P-201ENST00000365510 CSRNP3Q8WYN3 585 aa11.09□□□□□ -0.63
RNU1-55P-201ENST00000365510 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
RNU1-55P-201ENST00000365510 COL17A1Q9UMD9 1497 aaPredicted RBP11.08□□□□□ -0.64
RNU1-55P-201ENST00000365510 KDM6BO15054 1643 aa11.08□□□□□ -0.64
RNU1-55P-201ENST00000365510 CUL7Q14999 1698 aa11.07□□□□□ -0.64
RNU1-55P-201ENST00000365510 ASXL2Q76L83 1435 aa11.06□□□□□ -0.64
RNU1-55P-201ENST00000365510 KIF21BO75037 1637 aa11.06□□□□□ -0.64
RNU1-55P-201ENST00000365510 TNIKQ9UKE5 1360 aa11.05□□□□□ -0.64
RNU1-55P-201ENST00000365510 ARID3CA6NKF2 412 aa11.05□□□□□ -0.64
RNU1-55P-201ENST00000365510 KCNH8Q96L42 1107 aa11.05□□□□□ -0.64
RNU1-55P-201ENST00000365510 PRXQ9BXM0 1461 aa11.05□□□□□ -0.64
RNU1-55P-201ENST00000365510 GOLGA3Q08378 1498 aa11.03□□□□□ -0.64
RNU1-55P-201ENST00000365510 PPRC1Q5VV67 1664 aaKnown RBP11.01□□□□□ -0.65
RNU1-55P-201ENST00000365510 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
RNU1-55P-201ENST00000365510 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
RNU1-55P-201ENST00000365510 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
RNU1-55P-201ENST00000365510 ABCC2Q92887 1545 aa11□□□□□ -0.65
RNU1-55P-201ENST00000365510 DISP1Q96F81 1524 aa11□□□□□ -0.65
RNU1-55P-201ENST00000365510 CARMIL2Q6F5E8 1435 aa10.99□□□□□ -0.65
RNU1-55P-201ENST00000365510 ADGRL1O94910 1474 aa10.99□□□□□ -0.65
RNU1-55P-201ENST00000365510 EPRSP07814 1512 aaKnown RBP10.96□□□□□ -0.65
RNU1-55P-201ENST00000365510 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.65
RNU1-55P-201ENST00000365510 IQGAP2Q13576 1575 aa10.95□□□□□ -0.66
RNU1-55P-201ENST00000365510 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
RNU1-55P-201ENST00000365510 RANGAP1P46060 587 aaPredicted RBP10.94□□□□□ -0.66
RNU1-55P-201ENST00000365510 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
RNU1-55P-201ENST00000365510 LOC105371045A0A1W2PR82 267 aa10.93□□□□□ -0.66
RNU1-55P-201ENST00000365510 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
RNU1-55P-201ENST00000365510 GLI2P10070 1586 aa10.93□□□□□ -0.66
RNU1-55P-201ENST00000365510 KDM5BQ9UGL1 1544 aa10.92□□□□□ -0.66
RNU1-55P-201ENST00000365510 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
RNU1-55P-201ENST00000365510 UGGT2Q9NYU1 1516 aa10.89□□□□□ -0.67
RNU1-55P-201ENST00000365510 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
RNU1-55P-201ENST00000365510 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
RNU1-55P-201ENST00000365510 CD109Q6YHK3 1445 aa10.88□□□□□ -0.67
RNU1-55P-201ENST00000365510 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
RNU1-55P-201ENST00000365510 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
RNU1-55P-201ENST00000365510 RAPGEF3O95398 923 aa10.87□□□□□ -0.67
RNU1-55P-201ENST00000365510 PLPPR3Q6T4P5 718 aa10.87□□□□□ -0.67
RNU1-55P-201ENST00000365510 CEP162Q5TB80 1403 aa10.85□□□□□ -0.67
RNU1-55P-201ENST00000365510 WDR7Q9Y4E6 1490 aa10.85□□□□□ -0.67
RNU1-55P-201ENST00000365510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.83□□□□□ -0.68
RNU1-55P-201ENST00000365510 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
RNU1-55P-201ENST00000365510 CLIP1P30622 1438 aa10.83□□□□□ -0.68
RNU1-55P-201ENST00000365510 TEX14Q8IWB6 1497 aa10.82□□□□□ -0.68
RNU1-55P-201ENST00000365510 EFCAB5A4FU69 1503 aa10.81□□□□□ -0.68
RNU1-55P-201ENST00000365510 ABCA8O94911 1581 aa10.81□□□□□ -0.68
RNU1-55P-201ENST00000365510 ATP10BO94823 1461 aa10.81□□□□□ -0.68
RNU1-55P-201ENST00000365510 ARID4BQ4LE39 1312 aaPredicted RBP10.78□□□□□ -0.68
RNU1-55P-201ENST00000365510 MAGI3Q5TCQ9 1506 aa10.78□□□□□ -0.68
RNU1-55P-201ENST00000365510 ARHGAP35Q9NRY4 1499 aa10.77□□□□□ -0.69
RNU1-55P-201ENST00000365510 SAMD9Q5K651 1589 aa10.77□□□□□ -0.69
RNU1-55P-201ENST00000365510 HSPA2P54652 639 aa10.76□□□□□ -0.69
RNU1-55P-201ENST00000365510 MLECQ14165 292 aa10.74□□□□□ -0.69
RNU1-55P-201ENST00000365510 CFAP43Q8NDM7 1665 aa10.73□□□□□ -0.69
RNU1-55P-201ENST00000365510 FHOD3Q2V2M9 1422 aa10.73□□□□□ -0.69
RNU1-55P-201ENST00000365510 PTPRMP28827 1452 aa10.71□□□□□ -0.69
RNU1-55P-201ENST00000365510 FBXO41Q8TF61 875 aa10.71□□□□□ -0.69
RNU1-55P-201ENST00000365510 ARAP3Q8WWN8 1544 aa10.71□□□□□ -0.69
RNU1-55P-201ENST00000365510 FMN1Q68DA7 1419 aa10.7□□□□□ -0.7
RNU1-55P-201ENST00000365510 VPS8Q8N3P4 1428 aa10.7□□□□□ -0.7
RNU1-55P-201ENST00000365510 ATP1B4Q9UN42 357 aaPredicted RBP10.7□□□□□ -0.7
RNU1-55P-201ENST00000365510 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
RNU1-55P-201ENST00000365510 CEBPAP49715 358 aaPredicted RBP10.68□□□□□ -0.7
RNU1-55P-201ENST00000365510 ADAMTSL3P82987 1691 aa10.67□□□□□ -0.7
RNU1-55P-201ENST00000365510 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
RNU1-55P-201ENST00000365510 ABCA9Q8IUA7 1624 aa10.66□□□□□ -0.7
RNU1-55P-201ENST00000365510 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.7
RNU1-55P-201ENST00000365510 FYCO1Q9BQS8 1478 aa10.65□□□□□ -0.7
RNU1-55P-201ENST00000365510 RAPGEF6Q8TEU7 1601 aa10.65□□□□□ -0.7
RNU1-55P-201ENST00000365510 MADDQ8WXG6 1647 aa10.65□□□□□ -0.7
RNU1-55P-201ENST00000365510 PCF11O94913 1555 aaKnown RBP10.65□□□□□ -0.71
RNU1-55P-201ENST00000365510 AKNAQ7Z591 1439 aa10.64□□□□□ -0.71
RNU1-55P-201ENST00000365510 YEATS2Q9ULM3 1422 aa10.64□□□□□ -0.71
RNU1-55P-201ENST00000365510 SIGLEC1Q9BZZ2 1709 aa10.64□□□□□ -0.71
RNU1-55P-201ENST00000365510 CASKIN1Q8WXD9 1431 aa10.63□□□□□ -0.71
RNU1-55P-201ENST00000365510 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
RNU1-55P-201ENST00000365510 BCORL1Q5H9F3 1711 aa10.62□□□□□ -0.71
RNU1-55P-201ENST00000365510 RIMS1Q86UR5 1692 aaKnown RBP10.62□□□□□ -0.71
RNU1-55P-201ENST00000365510 LMTK3Q96Q04 1460 aa10.61□□□□□ -0.71
RNU1-55P-201ENST00000365510 DENND4BO75064 1496 aaPredicted RBP10.61□□□□□ -0.71
RNU1-55P-201ENST00000365510 NEO1Q92859 1461 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms