RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 ATMINO43313 823 aaPredicted RBP3.1□□□□□ -1.91
RNU6-838P-201ENST00000363399 PPP4R3CPQ6ZMV5 832 aa3.1□□□□□ -1.91
RNU6-838P-201ENST00000363399 FAM205CA6NFA0 338 aa3.09□□□□□ -1.91
RNU6-838P-201ENST00000363399 EMP3P54852 163 aa3.08□□□□□ -1.92
RNU6-838P-201ENST00000363399 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
RNU6-838P-201ENST00000363399 ZNF775Q96BV0 537 aaPredicted RBP3.07□□□□□ -1.92
RNU6-838P-201ENST00000363399 LCE2BO14633 110 aa3.05□□□□□ -1.92
RNU6-838P-201ENST00000363399 SPDYE1Q8NFV5 336 aaPredicted RBP3.05□□□□□ -1.92
RNU6-838P-201ENST00000363399 FARP1Q9Y4F1 1045 aaPredicted RBP3.05□□□□□ -1.92
RNU6-838P-201ENST00000363399 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
RNU6-838P-201ENST00000363399 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
RNU6-838P-201ENST00000363399 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
RNU6-838P-201ENST00000363399 KRTAP9-8Q9BYQ0 159 aa3.02□□□□□ -1.93
RNU6-838P-201ENST00000363399 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
RNU6-838P-201ENST00000363399 PHF12Q96QT6 1004 aa3□□□□□ -1.93
RNU6-838P-201ENST00000363399 XP32Q5T750 250 aa2.99□□□□□ -1.93
RNU6-838P-201ENST00000363399 PSMG3-AS1Q96PY0 264 aa2.99□□□□□ -1.93
RNU6-838P-201ENST00000363399 KRTAP4-7Q9BYR0 210 aa2.99□□□□□ -1.93
RNU6-838P-201ENST00000363399 ATN1P54259 1190 aaPredicted RBP2.98□□□□□ -1.93
RNU6-838P-201ENST00000363399 COLQQ9Y215 455 aaPredicted RBP2.97□□□□□ -1.93
RNU6-838P-201ENST00000363399 ATF5Q9Y2D1 282 aaPredicted RBP2.96□□□□□ -1.94
RNU6-838P-201ENST00000363399 SNPHO15079 494 aa2.95□□□□□ -1.94
RNU6-838P-201ENST00000363399 RGS20O76081 388 aa2.95□□□□□ -1.94
RNU6-838P-201ENST00000363399 ZNF787Q6DD87 383 aa2.93□□□□□ -1.94
RNU6-838P-201ENST00000363399 TRAF7Q6Q0C0 670 aa2.93□□□□□ -1.94
RNU6-838P-201ENST00000363399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.92□□□□□ -1.94
RNU6-838P-201ENST00000363399 HNRNPUL2Q1KMD3 747 aaKnown RBP2.92□□□□□ -1.94
RNU6-838P-201ENST00000363399 ZBTB12Q9Y330 459 aaPredicted RBP2.92□□□□□ -1.94
RNU6-838P-201ENST00000363399 PRR29P0C7W0 189 aa2.91□□□□□ -1.94
RNU6-838P-201ENST00000363399 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
RNU6-838P-201ENST00000363399 MS4A3Q96HJ5 214 aa2.9□□□□□ -1.95
RNU6-838P-201ENST00000363399 BTBD11A6QL63 1104 aa2.89□□□□□ -1.95
RNU6-838P-201ENST00000363399 STK17AQ9UEE5 414 aa2.89□□□□□ -1.95
RNU6-838P-201ENST00000363399 SEC24BO95487 1268 aa2.88□□□□□ -1.95
RNU6-838P-201ENST00000363399 SAMD1Q6SPF0 538 aaPredicted RBP2.87□□□□□ -1.95
RNU6-838P-201ENST00000363399 PTGER2P43116 358 aa2.86□□□□□ -1.95
RNU6-838P-201ENST00000363399 HCSTQ9UBK5 93 aa2.84□□□□□ -1.95
RNU6-838P-201ENST00000363399 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
RNU6-838P-201ENST00000363399 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
RNU6-838P-201ENST00000363399 SLC4A2P04920 1241 aa2.81□□□□□ -1.96
RNU6-838P-201ENST00000363399 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
RNU6-838P-201ENST00000363399 KRTAP4-9Q9BYQ8 210 aa2.79□□□□□ -1.96
RNU6-838P-201ENST00000363399 SPDYE2BA6NHP3 402 aa2.78□□□□□ -1.96
RNU6-838P-201ENST00000363399 SPDYE6P0CI01 402 aa2.78□□□□□ -1.96
RNU6-838P-201ENST00000363399 SPDYE2Q495Y8 402 aa2.78□□□□□ -1.96
RNU6-838P-201ENST00000363399 TREML4Q6UXN2 200 aa2.78□□□□□ -1.96
RNU6-838P-201ENST00000363399 BMP2KQ9NSY1 1161 aaPredicted RBP2.78□□□□□ -1.96
RNU6-838P-201ENST00000363399 ANKRD13DQ6ZTN6 518 aa2.77□□□□□ -1.97
RNU6-838P-201ENST00000363399 ANO8Q9HCE9 1232 aaPredicted RBP2.77□□□□□ -1.97
RNU6-838P-201ENST00000363399 ERBB3P21860 1342 aa2.75□□□□□ -1.97
RNU6-838P-201ENST00000363399 A0A0G2JS52 829 aa2.74□□□□□ -1.97
RNU6-838P-201ENST00000363399 PAK3O75914 559 aaPredicted RBP2.74□□□□□ -1.97
RNU6-838P-201ENST00000363399 TRPC6Q9Y210 931 aa2.73□□□□□ -1.97
RNU6-838P-201ENST00000363399 LAPTM4AQ15012 233 aa2.72□□□□□ -1.97
RNU6-838P-201ENST00000363399 GFRA3O60609 400 aa2.71□□□□□ -1.98
RNU6-838P-201ENST00000363399 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.71□□□□□ -1.98
RNU6-838P-201ENST00000363399 VARS2Q5ST30 1063 aaKnown RBP2.7□□□□□ -1.98
RNU6-838P-201ENST00000363399 LORP23490 312 aaPredicted RBP2.68□□□□□ -1.98
RNU6-838P-201ENST00000363399 INSM1Q01101 510 aaPredicted RBP2.68□□□□□ -1.98
RNU6-838P-201ENST00000363399 ZNF687Q8N1G0 1237 aa2.67□□□□□ -1.98
RNU6-838P-201ENST00000363399 IFFO2Q5TF58 517 aa2.66□□□□□ -1.98
RNU6-838P-201ENST00000363399 KRTAP4-5Q9BYR2 181 aa2.66□□□□□ -1.98
RNU6-838P-201ENST00000363399 IER5LQ5T953 404 aa2.65□□□□□ -1.99
RNU6-838P-201ENST00000363399 KCTD17Q8N5Z5 321 aa2.65□□□□□ -1.99
RNU6-838P-201ENST00000363399 POTECB2RU33 542 aa2.64□□□□□ -1.99
RNU6-838P-201ENST00000363399 HOXB1P14653 301 aaPredicted RBP2.63□□□□□ -1.99
RNU6-838P-201ENST00000363399 SSUH2Q9Y2M2 353 aa2.63□□□□□ -1.99
RNU6-838P-201ENST00000363399 TTLL13PA6NNM8 815 aa2.62□□□□□ -1.99
RNU6-838P-201ENST00000363399 WIPF1O43516 503 aa2.62□□□□□ -1.99
RNU6-838P-201ENST00000363399 TIE1P35590 1138 aa2.62□□□□□ -1.99
RNU6-838P-201ENST00000363399 KRTAP19-1Q8IUB9 90 aa2.62□□□□□ -1.99
RNU6-838P-201ENST00000363399 TRIM35Q9UPQ4 493 aa2.61□□□□□ -1.99
RNU6-838P-201ENST00000363399 PLCG2P16885 1265 aa2.6□□□□□ -1.99
RNU6-838P-201ENST00000363399 LSM11P83369 360 aaKnown RBP eCLIP2.6□□□□□ -1.99
RNU6-838P-201ENST00000363399 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
RNU6-838P-201ENST00000363399 WFS1O76024 890 aa2.59□□□□□ -1.99
RNU6-838P-201ENST00000363399 ZNF692Q9BU19 519 aaPredicted RBP2.59□□□□□ -1.99
RNU6-838P-201ENST00000363399 NPM3O75607 178 aaKnown RBP2.57□□□□□ -2
RNU6-838P-201ENST00000363399 HOXB3P14651 431 aaPredicted RBP2.57□□□□□ -2
RNU6-838P-201ENST00000363399 CREBZFQ9NS37 354 aa2.57□□□□□ -2
RNU6-838P-201ENST00000363399 NRG2O14511 850 aaPredicted RBP2.56□□□□□ -2
RNU6-838P-201ENST00000363399 LAMC2Q13753 1193 aa2.54□□□□□ -2
RNU6-838P-201ENST00000363399 FAM181BA6NEQ2 426 aa2.53□□□□□ -2
RNU6-838P-201ENST00000363399 IRX5P78411 483 aaPredicted RBP2.53□□□□□ -2
RNU6-838P-201ENST00000363399 PABPN1Q86U42 306 aaKnown RBP eCLIP2.53□□□□□ -2
RNU6-838P-201ENST00000363399 ZNF710Q8N1W2 664 aa2.53□□□□□ -2
RNU6-838P-201ENST00000363399 NCBP3Q53F19 620 aaKnown RBP2.51□□□□□ -2.01
RNU6-838P-201ENST00000363399 KCTD12Q96CX2 325 aaKnown RBP2.51□□□□□ -2.01
RNU6-838P-201ENST00000363399 KIF12Q96FN5 646 aa2.51□□□□□ -2.01
RNU6-838P-201ENST00000363399 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
RNU6-838P-201ENST00000363399 NFX1Q12986 1120 aaKnown RBP2.49□□□□□ -2.01
RNU6-838P-201ENST00000363399 PTPN5P54829 565 aa2.48□□□□□ -2.01
RNU6-838P-201ENST00000363399 C3orf67Q6ZVT6 689 aa2.48□□□□□ -2.01
RNU6-838P-201ENST00000363399 Q8N3U1 123 aa2.47□□□□□ -2.01
RNU6-838P-201ENST00000363399 GSK3AP49840 483 aa2.46□□□□□ -2.02
RNU6-838P-201ENST00000363399 POTEEQ6S8J3 1075 aa2.46□□□□□ -2.02
RNU6-838P-201ENST00000363399 OCEL1Q9H607 264 aa2.46□□□□□ -2.02
RNU6-838P-201ENST00000363399 MAP3K13O43283 966 aa2.45□□□□□ -2.02
RNU6-838P-201ENST00000363399 GOLGA2P5Q9HBQ8 144 aa2.44□□□□□ -2.02
RNU6-838P-201ENST00000363399 CCDC61Q9Y6R9 512 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms