RNA–Protein interactions for RNA: ENST00000362076.8

C1orf43-202, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-202ENST00000362076 EIF4G3O43432 1585 aaKnown RBP24.9■■□□□ 1.58
C1orf43-202ENST00000362076 EFCAB5A4FU69 1503 aa24.84■■□□□ 1.57
C1orf43-202ENST00000362076 APLP2Q06481 763 aa24.84■■□□□ 1.57
C1orf43-202ENST00000362076 MAGI1Q96QZ7 1491 aaPredicted RBP24.83■■□□□ 1.57
C1orf43-202ENST00000362076 SNAPC4Q5SXM2 1469 aa24.79■■□□□ 1.56
C1orf43-202ENST00000362076 PPARGC1BQ86YN6 1023 aaKnown RBP24.74■■□□□ 1.55
C1orf43-202ENST00000362076 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
C1orf43-202ENST00000362076 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
C1orf43-202ENST00000362076 IQGAP2Q13576 1575 aa24.68■■□□□ 1.54
C1orf43-202ENST00000362076 SAMD9Q5K651 1589 aa24.67■■□□□ 1.54
C1orf43-202ENST00000362076 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
C1orf43-202ENST00000362076 KIAA0586Q9BVV6 1533 aa24.64■■□□□ 1.54
C1orf43-202ENST00000362076 FMN1Q68DA7 1419 aa24.63■■□□□ 1.53
C1orf43-202ENST00000362076 MAP3K1Q13233 1512 aa24.63■■□□□ 1.53
C1orf43-202ENST00000362076 FHOD3Q2V2M9 1422 aa24.6■■□□□ 1.53
C1orf43-202ENST00000362076 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
C1orf43-202ENST00000362076 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
C1orf43-202ENST00000362076 FYCO1Q9BQS8 1478 aa24.56■■□□□ 1.52
C1orf43-202ENST00000362076 CASKIN1Q8WXD9 1431 aa24.55■■□□□ 1.52
C1orf43-202ENST00000362076 NUP160Q12769 1436 aa24.53■■□□□ 1.52
C1orf43-202ENST00000362076 TTBK1Q5TCY1 1321 aaPredicted RBP24.52■■□□□ 1.52
C1orf43-202ENST00000362076 FBLN2P98095 1184 aa24.51■■□□□ 1.51
C1orf43-202ENST00000362076 PCF11O94913 1555 aaKnown RBP24.51■■□□□ 1.51
C1orf43-202ENST00000362076 TIAM1Q13009 1591 aa24.5■■□□□ 1.51
C1orf43-202ENST00000362076 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
C1orf43-202ENST00000362076 KANK4Q5T7N3 995 aaPredicted RBP24.45■■□□□ 1.5
C1orf43-202ENST00000362076 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
C1orf43-202ENST00000362076 KIAA0556O60303 1618 aa24.41■■□□□ 1.5
C1orf43-202ENST00000362076 LRRC9Q6ZRR7 1453 aa24.39■■□□□ 1.5
C1orf43-202ENST00000362076 DISP1Q96F81 1524 aa24.39■■□□□ 1.5
C1orf43-202ENST00000362076 ATP1B4Q9UN42 357 aaPredicted RBP24.38■■□□□ 1.49
C1orf43-202ENST00000362076 CARMIL2Q6F5E8 1435 aa24.37■■□□□ 1.49
C1orf43-202ENST00000362076 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
C1orf43-202ENST00000362076 CHD1O14646 1710 aa24.35■■□□□ 1.49
C1orf43-202ENST00000362076 HRCP23327 699 aa24.33■■□□□ 1.49
C1orf43-202ENST00000362076 HECW1Q76N89 1606 aa24.33■■□□□ 1.48
C1orf43-202ENST00000362076 CCDC18Q5T9S5 1454 aa24.32■■□□□ 1.48
C1orf43-202ENST00000362076 RRBP1Q9P2E9 1410 aaKnown RBP24.29■■□□□ 1.48
C1orf43-202ENST00000362076 LRRIQ1Q96JM4 1722 aa24.23■■□□□ 1.47
C1orf43-202ENST00000362076 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
C1orf43-202ENST00000362076 EPRSP07814 1512 aaKnown RBP24.21■■□□□ 1.47
C1orf43-202ENST00000362076 RAPGEF6Q8TEU7 1601 aa24.19■■□□□ 1.46
C1orf43-202ENST00000362076 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
C1orf43-202ENST00000362076 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
C1orf43-202ENST00000362076 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
C1orf43-202ENST00000362076 ZEB1P37275 1124 aaPredicted RBP24.17■■□□□ 1.46
C1orf43-202ENST00000362076 PRG4Q92954 1404 aaPredicted RBP24.16■■□□□ 1.46
C1orf43-202ENST00000362076 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
C1orf43-202ENST00000362076 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
C1orf43-202ENST00000362076 NUP153P49790 1475 aaKnown RBP24.11■■□□□ 1.45
C1orf43-202ENST00000362076 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
C1orf43-202ENST00000362076 CDK11AQ9UQ88 783 aaPredicted RBP24.11■■□□□ 1.45
C1orf43-202ENST00000362076 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
C1orf43-202ENST00000362076 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.45
C1orf43-202ENST00000362076 NCOA2Q15596 1464 aa24.06■■□□□ 1.44
C1orf43-202ENST00000362076 PTPRGP23470 1445 aa24.06■■□□□ 1.44
C1orf43-202ENST00000362076 CDK13Q14004 1512 aaKnown RBP24.06■■□□□ 1.44
C1orf43-202ENST00000362076 PLB1Q6P1J6 1458 aa24.06■■□□□ 1.44
C1orf43-202ENST00000362076 ABCA8O94911 1581 aa24.06■■□□□ 1.44
C1orf43-202ENST00000362076 ARHGEF11O15085 1522 aa24.03■■□□□ 1.44
C1orf43-202ENST00000362076 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
C1orf43-202ENST00000362076 MYOM3Q5VTT5 1437 aa24.01■■□□□ 1.43
C1orf43-202ENST00000362076 FGD6Q6ZV73 1430 aa24■■□□□ 1.43
C1orf43-202ENST00000362076 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
C1orf43-202ENST00000362076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.98■■□□□ 1.43
C1orf43-202ENST00000362076 FAM50AQ14320 339 aaKnown RBP23.95■■□□□ 1.43
C1orf43-202ENST00000362076 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
C1orf43-202ENST00000362076 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
C1orf43-202ENST00000362076 ARID3CA6NKF2 412 aa23.93■■□□□ 1.42
C1orf43-202ENST00000362076 MIA2Q96PC5 1412 aa23.92■■□□□ 1.42
C1orf43-202ENST00000362076 ATP10BO94823 1461 aa23.9■■□□□ 1.42
C1orf43-202ENST00000362076 PLEKHD1A6NEE1 506 aa23.88■■□□□ 1.41
C1orf43-202ENST00000362076 OSCARQ8IYS5 282 aa23.88■■□□□ 1.41
C1orf43-202ENST00000362076 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
C1orf43-202ENST00000362076 ADCY10Q96PN6 1610 aa23.87■■□□□ 1.41
C1orf43-202ENST00000362076 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
C1orf43-202ENST00000362076 ITGAEP38570 1179 aa23.86■■□□□ 1.41
C1orf43-202ENST00000362076 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
C1orf43-202ENST00000362076 ABCC2Q92887 1545 aa23.84■■□□□ 1.41
C1orf43-202ENST00000362076 UHRF1BP1LA0JNW5 1464 aa23.82■■□□□ 1.4
C1orf43-202ENST00000362076 SETD5Q9C0A6 1442 aa23.79■■□□□ 1.4
C1orf43-202ENST00000362076 ITSN2Q9NZM3 1697 aa23.77■■□□□ 1.4
C1orf43-202ENST00000362076 KIF14Q15058 1648 aa23.77■■□□□ 1.4
C1orf43-202ENST00000362076 CLSPNQ9HAW4 1339 aa23.77■■□□□ 1.4
C1orf43-202ENST00000362076 RAB3GAP2Q9H2M9 1393 aa23.71■■□□□ 1.39
C1orf43-202ENST00000362076 GPATCH8Q9UKJ3 1502 aaKnown RBP23.71■■□□□ 1.39
C1orf43-202ENST00000362076 KDM5BQ9UGL1 1544 aa23.7■■□□□ 1.38
C1orf43-202ENST00000362076 ABCC10Q5T3U5 1492 aa23.69■■□□□ 1.38
C1orf43-202ENST00000362076 CFDP1Q9UEE9 299 aaPredicted RBP23.69■■□□□ 1.38
C1orf43-202ENST00000362076 DHX57Q6P158 1386 aaKnown RBP23.68■■□□□ 1.38
C1orf43-202ENST00000362076 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
C1orf43-202ENST00000362076 PTPRKQ15262 1439 aa23.66■■□□□ 1.38
C1orf43-202ENST00000362076 AKNAQ7Z591 1439 aa23.65■■□□□ 1.38
C1orf43-202ENST00000362076 ZCCHC11Q5TAX3 1644 aaKnown RBP23.63■■□□□ 1.37
C1orf43-202ENST00000362076 CDC42BPAQ5VT25 1732 aa23.62■■□□□ 1.37
C1orf43-202ENST00000362076 DNMT1P26358 1616 aaKnown RBP23.62■■□□□ 1.37
C1orf43-202ENST00000362076 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
C1orf43-202ENST00000362076 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
C1orf43-202ENST00000362076 DAPK1P53355 1430 aa23.59■■□□□ 1.37
C1orf43-202ENST00000362076 ROCK1Q13464 1354 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms