RNA–Protein interactions for RNA: ENST00000361204.8

SREBF2-201, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SREBF2, Length 5,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-201ENST00000361204 NOP58Q9Y2X3 529 aaKnown RBP23.77■■□□□ 1.39
SREBF2-201ENST00000361204 PPM1GO15355 546 aaPredicted RBP23.76■■□□□ 1.39
SREBF2-201ENST00000361204 RBM19Q9Y4C8 960 aaKnown RBP23.74■■□□□ 1.39
SREBF2-201ENST00000361204 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
SREBF2-201ENST00000361204 BECN1Q14457 450 aa23.7■■□□□ 1.38
SREBF2-201ENST00000361204 KDM2AQ9Y2K7 1162 aa23.69■■□□□ 1.38
SREBF2-201ENST00000361204 RTN4Q9NQC3 1192 aaKnown RBP23.65■■□□□ 1.38
SREBF2-201ENST00000361204 RRP7BPQ9NSQ0 103 aa23.65■■□□□ 1.38
SREBF2-201ENST00000361204 SIN3AQ96ST3 1273 aa23.63■■□□□ 1.37
SREBF2-201ENST00000361204 LAS1LQ9Y4W2 734 aaKnown RBP23.63■■□□□ 1.37
SREBF2-201ENST00000361204 ERICH6BQ5W0A0 696 aa23.63■■□□□ 1.37
SREBF2-201ENST00000361204 B4GALNT3Q6L9W6 998 aa23.62■■□□□ 1.37
SREBF2-201ENST00000361204 DEKP35659 375 aaKnown RBP23.62■■□□□ 1.37
SREBF2-201ENST00000361204 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
SREBF2-201ENST00000361204 TRIM44Q96DX7 344 aaPredicted RBP23.6■■□□□ 1.37
SREBF2-201ENST00000361204 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
SREBF2-201ENST00000361204 SENP3-EIF4A1A0A087X0R7 540 aa23.59■■□□□ 1.37
SREBF2-201ENST00000361204 CCER2I3L3R5 266 aa23.57■■□□□ 1.36
SREBF2-201ENST00000361204 WRNQ14191 1432 aaPredicted RBP eCLIP23.56■■□□□ 1.36
SREBF2-201ENST00000361204 TSPY4P0CV99 314 aa23.53■■□□□ 1.36
SREBF2-201ENST00000361204 TSPY10P0CW01 314 aa23.53■■□□□ 1.36
SREBF2-201ENST00000361204 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
SREBF2-201ENST00000361204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.361e-14■■■□□ 18.1
SREBF2-201ENST00000361204 TIMELESSQ9UNS1 1208 aa23.48■■□□□ 1.35
SREBF2-201ENST00000361204 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
SREBF2-201ENST00000361204 CCNB3Q8WWL7 1395 aa23.45■■□□□ 1.35
SREBF2-201ENST00000361204 GOLGA6L22H0YM25 854 aa23.44■■□□□ 1.34
SREBF2-201ENST00000361204 NAP1L5Q96NT1 182 aaPredicted RBP23.4■■□□□ 1.34
SREBF2-201ENST00000361204 MYH16Q9H6N6 1097 aa23.38■■□□□ 1.33
SREBF2-201ENST00000361204 RGS3P49796 1198 aa23.38■■□□□ 1.33
SREBF2-201ENST00000361204 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
SREBF2-201ENST00000361204 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
SREBF2-201ENST00000361204 SOGA1O94964 1423 aa23.31■■□□□ 1.32
SREBF2-201ENST00000361204 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
SREBF2-201ENST00000361204 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
SREBF2-201ENST00000361204 NCLP19338 710 aaKnown RBP23.28■■□□□ 1.32
SREBF2-201ENST00000361204 RGL3Q3MIN7 710 aa23.28■■□□□ 1.32
SREBF2-201ENST00000361204 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
SREBF2-201ENST00000361204 SETD5Q9C0A6 1442 aa23.24■■□□□ 1.31
SREBF2-201ENST00000361204 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
SREBF2-201ENST00000361204 STAG3Q9UJ98 1225 aa23.23■■□□□ 1.31
SREBF2-201ENST00000361204 PTMAP06454 111 aaKnown RBP23.23■■□□□ 1.31
SREBF2-201ENST00000361204 HSPA5P11021 654 aaKnown RBP23.2■■□□□ 1.3
SREBF2-201ENST00000361204 FTSJ3Q8IY81 847 aaKnown RBP23.19■■□□□ 1.3
SREBF2-201ENST00000361204 L1TD1Q5T7N2 865 aaKnown RBP23.18■■□□□ 1.3
SREBF2-201ENST00000361204 DNTTIP2Q5QJE6 756 aaKnown RBP23.17■■□□□ 1.3
SREBF2-201ENST00000361204 CFAP53Q96M91 514 aa23.17■■□□□ 1.3
SREBF2-201ENST00000361204 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
SREBF2-201ENST00000361204 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.3
SREBF2-201ENST00000361204 IPO9Q96P70 1041 aaKnown RBP23.14■■□□□ 1.29
SREBF2-201ENST00000361204 CFDP1Q9UEE9 299 aaPredicted RBP23.14■■□□□ 1.29
SREBF2-201ENST00000361204 TCERG1O14776 1098 aaKnown RBP23.13■■□□□ 1.29
SREBF2-201ENST00000361204 NEUROD2Q15784 382 aa23.13■■□□□ 1.29
SREBF2-201ENST00000361204 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
SREBF2-201ENST00000361204 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
SREBF2-201ENST00000361204 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
SREBF2-201ENST00000361204 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SREBF2-201ENST00000361204 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.29
SREBF2-201ENST00000361204 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
SREBF2-201ENST00000361204 HSP90AB1P08238 724 aaKnown RBP23.07■■□□□ 1.28
SREBF2-201ENST00000361204 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
SREBF2-201ENST00000361204 CASC1Q6TDU7 716 aa23.05■■□□□ 1.28
SREBF2-201ENST00000361204 ESF1Q9H501 851 aaKnown RBP23.05■■□□□ 1.28
SREBF2-201ENST00000361204 RCAN3Q9UKA8 241 aa23.05■■□□□ 1.28
SREBF2-201ENST00000361204 BAZ1BQ9UIG0 1483 aaKnown RBP23.04■■□□□ 1.28
SREBF2-201ENST00000361204 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.04■■□□□ 1.28
SREBF2-201ENST00000361204 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
SREBF2-201ENST00000361204 HSCBQ8IWL3 235 aa23.02■■□□□ 1.28
SREBF2-201ENST00000361204 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
SREBF2-201ENST00000361204 MS4A1P11836 297 aa23.01■■□□□ 1.27
SREBF2-201ENST00000361204 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
SREBF2-201ENST00000361204 NUDCQ9Y266 331 aa23■■□□□ 1.27
SREBF2-201ENST00000361204 NACADO15069 1562 aa22.97■■□□□ 1.27
SREBF2-201ENST00000361204 DCAF11Q8TEB1 546 aa22.96■■□□□ 1.27
SREBF2-201ENST00000361204 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
SREBF2-201ENST00000361204 MAPK8IP3Q9UPT6 1336 aa22.96■■□□□ 1.27
SREBF2-201ENST00000361204 TMF1P82094 1093 aa22.96■■□□□ 1.27
SREBF2-201ENST00000361204 MSNP26038 577 aaKnown RBP22.95■■□□□ 1.27
SREBF2-201ENST00000361204 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
SREBF2-201ENST00000361204 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
SREBF2-201ENST00000361204 SPRYD3Q8NCJ5 442 aa22.94■■□□□ 1.26
SREBF2-201ENST00000361204 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
SREBF2-201ENST00000361204 CHMP4BQ9H444 224 aaKnown RBP22.94■■□□□ 1.26
SREBF2-201ENST00000361204 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
SREBF2-201ENST00000361204 TPRNQ4KMQ1 711 aa22.93■■□□□ 1.26
SREBF2-201ENST00000361204 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
SREBF2-201ENST00000361204 PLCB2Q00722 1185 aa22.92■■□□□ 1.26
SREBF2-201ENST00000361204 CARMIL1Q5VZK9 1371 aa22.92■■□□□ 1.26
SREBF2-201ENST00000361204 USP35Q9P2H5 1018 aa22.91■■□□□ 1.26
SREBF2-201ENST00000361204 SLKQ9H2G2 1235 aaPredicted RBP22.91■■□□□ 1.26
SREBF2-201ENST00000361204 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
SREBF2-201ENST00000361204 RALBP1Q15311 655 aa22.88■■□□□ 1.25
SREBF2-201ENST00000361204 ZRSR1Q15695 479 aaKnown RBP22.87■■□□□ 1.25
SREBF2-201ENST00000361204 FOXD1Q16676 465 aa22.86■■□□□ 1.25
SREBF2-201ENST00000361204 GZF1Q9H116 711 aaPredicted RBP22.85■■□□□ 1.25
SREBF2-201ENST00000361204 ARID4BQ4LE39 1312 aaPredicted RBP22.85■■□□□ 1.25
SREBF2-201ENST00000361204 MROH2BQ7Z745 1585 aa22.85■■□□□ 1.25
SREBF2-201ENST00000361204 SENP3Q9H4L4 574 aaPredicted RBP22.83■■□□□ 1.24
SREBF2-201ENST00000361204 MPHOSPH9Q99550 1183 aa22.82■■□□□ 1.24
SREBF2-201ENST00000361204 CUX2O14529 1486 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms