RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 CHGAP10645 457 aaKnown RBP19.32■□□□□ 0.68
PCMTD1-201ENST00000360540 SENP3Q9H4L4 574 aaPredicted RBP19.31■□□□□ 0.68
PCMTD1-201ENST00000360540 NPM2Q86SE8 214 aaKnown RBP19.3■□□□□ 0.68
PCMTD1-201ENST00000360540 CUX2O14529 1486 aa19.27■□□□□ 0.68
PCMTD1-201ENST00000360540 TSPY4P0CV99 314 aa19.26■□□□□ 0.67
PCMTD1-201ENST00000360540 TSPY10P0CW01 314 aa19.26■□□□□ 0.67
PCMTD1-201ENST00000360540 CCNB3Q8WWL7 1395 aa19.26■□□□□ 0.67
PCMTD1-201ENST00000360540 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
PCMTD1-201ENST00000360540 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
PCMTD1-201ENST00000360540 RGL3Q3MIN7 710 aa19.25■□□□□ 0.67
PCMTD1-201ENST00000360540 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
PCMTD1-201ENST00000360540 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
PCMTD1-201ENST00000360540 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
PCMTD1-201ENST00000360540 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
PCMTD1-201ENST00000360540 FOXD1Q16676 465 aa19.16■□□□□ 0.66
PCMTD1-201ENST00000360540 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
PCMTD1-201ENST00000360540 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
PCMTD1-201ENST00000360540 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
PCMTD1-201ENST00000360540 CCDC136Q96JN2 1154 aa19.11■□□□□ 0.65
PCMTD1-201ENST00000360540 TDRD9Q8NDG6 1382 aaKnown RBP19.11■□□□□ 0.65
PCMTD1-201ENST00000360540 TOP2AP11388 1531 aaKnown RBP19.11■□□□□ 0.65
PCMTD1-201ENST00000360540 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
PCMTD1-201ENST00000360540 PLPPR3Q6T4P5 718 aa19.1■□□□□ 0.65
PCMTD1-201ENST00000360540 ANP32AP39687 249 aaKnown RBP19.06■□□□□ 0.64
PCMTD1-201ENST00000360540 SLC24A1O60721 1099 aa19.06■□□□□ 0.64
PCMTD1-201ENST00000360540 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
PCMTD1-201ENST00000360540 NBR1Q14596 966 aa19.01■□□□□ 0.63
PCMTD1-201ENST00000360540 ATAD2BQ9ULI0 1458 aa19■□□□□ 0.63
PCMTD1-201ENST00000360540 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
PCMTD1-201ENST00000360540 CARD11Q9BXL7 1154 aa18.98■□□□□ 0.63
PCMTD1-201ENST00000360540 FHAD1B1AJZ9 1412 aa18.98■□□□□ 0.63
PCMTD1-201ENST00000360540 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
PCMTD1-201ENST00000360540 SMARCA4P51532 1647 aa18.97■□□□□ 0.63
PCMTD1-201ENST00000360540 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
PCMTD1-201ENST00000360540 STAG3Q9UJ98 1225 aa18.95■□□□□ 0.62
PCMTD1-201ENST00000360540 FHOD3Q2V2M9 1422 aa18.94■□□□□ 0.62
PCMTD1-201ENST00000360540 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
PCMTD1-201ENST00000360540 WDR43Q15061 677 aaKnown RBP eCLIP18.91■□□□□ 0.62
PCMTD1-201ENST00000360540 HSPA5P11021 654 aaKnown RBP18.91■□□□□ 0.62
PCMTD1-201ENST00000360540 B4GALNT3Q6L9W6 998 aa18.89■□□□□ 0.62
PCMTD1-201ENST00000360540 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
PCMTD1-201ENST00000360540 NEFMP07197 916 aa18.87■□□□□ 0.61
PCMTD1-201ENST00000360540 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
PCMTD1-201ENST00000360540 PPP1R15AO75807 674 aaPredicted RBP18.86■□□□□ 0.61
PCMTD1-201ENST00000360540 ARHGAP35Q9NRY4 1499 aa18.85■□□□□ 0.61
PCMTD1-201ENST00000360540 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
PCMTD1-201ENST00000360540 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
PCMTD1-201ENST00000360540 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.61
PCMTD1-201ENST00000360540 PKD2Q13563 968 aa18.82■□□□□ 0.6
PCMTD1-201ENST00000360540 MPHOSPH9Q99550 1183 aa18.81■□□□□ 0.6
PCMTD1-201ENST00000360540 NEUROD2Q15784 382 aa18.8■□□□□ 0.6
PCMTD1-201ENST00000360540 ESF1Q9H501 851 aaKnown RBP18.8■□□□□ 0.6
PCMTD1-201ENST00000360540 ERCC6Q03468 1493 aa18.8■□□□□ 0.6
PCMTD1-201ENST00000360540 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
PCMTD1-201ENST00000360540 TNNT2P45379 298 aaPredicted RBP18.79■□□□□ 0.6
PCMTD1-201ENST00000360540 PLEKHG5O94827 1062 aa18.75■□□□□ 0.59
PCMTD1-201ENST00000360540 ARXQ96QS3 562 aa18.74■□□□□ 0.59
PCMTD1-201ENST00000360540 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
PCMTD1-201ENST00000360540 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
PCMTD1-201ENST00000360540 IGF1RP08069 1367 aa18.71■□□□□ 0.59
PCMTD1-201ENST00000360540 CCER2I3L3R5 266 aa18.69■□□□□ 0.58
PCMTD1-201ENST00000360540 FMN1Q68DA7 1419 aa18.69■□□□□ 0.58
PCMTD1-201ENST00000360540 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
PCMTD1-201ENST00000360540 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
PCMTD1-201ENST00000360540 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.67■□□□□ 0.58
PCMTD1-201ENST00000360540 HNRNPMP52272 730 aaKnown RBP eCLIP18.66■□□□□ 0.583e-6■■■■■ 43.2
PCMTD1-201ENST00000360540 ANP32EQ9BTT0 268 aa18.65■□□□□ 0.58
PCMTD1-201ENST00000360540 RAD54L2Q9Y4B4 1467 aa18.64■□□□□ 0.57
PCMTD1-201ENST00000360540 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
PCMTD1-201ENST00000360540 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
PCMTD1-201ENST00000360540 NUP155O75694 1391 aa18.64■□□□□ 0.57
PCMTD1-201ENST00000360540 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCMTD1-201ENST00000360540 RGS3P49796 1198 aa18.61■□□□□ 0.57
PCMTD1-201ENST00000360540 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
PCMTD1-201ENST00000360540 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
PCMTD1-201ENST00000360540 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
PCMTD1-201ENST00000360540 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
PCMTD1-201ENST00000360540 KIF21BO75037 1637 aa18.59■□□□□ 0.57
PCMTD1-201ENST00000360540 ZNF644Q9H582 1327 aaPredicted RBP18.58■□□□□ 0.57
PCMTD1-201ENST00000360540 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.57
PCMTD1-201ENST00000360540 FRAT1Q92837 279 aaPredicted RBP18.57■□□□□ 0.56
PCMTD1-201ENST00000360540 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
PCMTD1-201ENST00000360540 SYNJ1O43426 1573 aa18.57■□□□□ 0.56
PCMTD1-201ENST00000360540 ARAP1Q96P48 1450 aa18.56■□□□□ 0.56
PCMTD1-201ENST00000360540 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
PCMTD1-201ENST00000360540 JPH4Q96JJ6 628 aa18.56■□□□□ 0.56
PCMTD1-201ENST00000360540 GGT6Q6P531 493 aa18.55■□□□□ 0.56
PCMTD1-201ENST00000360540 TMF1P82094 1093 aa18.53■□□□□ 0.56
PCMTD1-201ENST00000360540 EIF5BO60841 1220 aaKnown RBP18.5■□□□□ 0.55
PCMTD1-201ENST00000360540 CDCA8Q53HL2 280 aa18.5■□□□□ 0.55
PCMTD1-201ENST00000360540 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
PCMTD1-201ENST00000360540 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
PCMTD1-201ENST00000360540 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
PCMTD1-201ENST00000360540 MLECQ14165 292 aa18.48■□□□□ 0.55
PCMTD1-201ENST00000360540 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
PCMTD1-201ENST00000360540 C14orf37Q86TY3 774 aa18.46■□□□□ 0.54
PCMTD1-201ENST00000360540 STK26Q9P289 416 aa18.46■□□□□ 0.54
PCMTD1-201ENST00000360540 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
PCMTD1-201ENST00000360540 ANKRD30AQ9BXX3 1397 aa18.45■□□□□ 0.54
PCMTD1-201ENST00000360540 CARMIL2Q6F5E8 1435 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms