RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.29■□□□□ 0.36
SRGAP3-201ENST00000360413 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
SRGAP3-201ENST00000360413 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.36
SRGAP3-201ENST00000360413 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
SRGAP3-201ENST00000360413 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
SRGAP3-201ENST00000360413 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
SRGAP3-201ENST00000360413 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
SRGAP3-201ENST00000360413 MSNP26038 577 aaKnown RBP17.23■□□□□ 0.35
SRGAP3-201ENST00000360413 PLCB2Q00722 1185 aa17.21■□□□□ 0.34
SRGAP3-201ENST00000360413 TNNT3P45378 269 aaPredicted RBP17.16■□□□□ 0.34
SRGAP3-201ENST00000360413 CHMP4BQ9H444 224 aaKnown RBP17.16■□□□□ 0.34
SRGAP3-201ENST00000360413 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
SRGAP3-201ENST00000360413 CHGAP10645 457 aaKnown RBP17.13■□□□□ 0.33
SRGAP3-201ENST00000360413 ZNF777Q9ULD5 760 aaPredicted RBP17.13■□□□□ 0.33
SRGAP3-201ENST00000360413 ARID3AQ99856 593 aa17.12■□□□□ 0.33
SRGAP3-201ENST00000360413 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
SRGAP3-201ENST00000360413 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
SRGAP3-201ENST00000360413 A0A0G2JS52 829 aa17.05■□□□□ 0.32
SRGAP3-201ENST00000360413 CDCA8Q53HL2 280 aa17.04■□□□□ 0.32
SRGAP3-201ENST00000360413 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
SRGAP3-201ENST00000360413 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
SRGAP3-201ENST00000360413 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
SRGAP3-201ENST00000360413 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
SRGAP3-201ENST00000360413 CFAP53Q96M91 514 aa17.01■□□□□ 0.31
SRGAP3-201ENST00000360413 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
SRGAP3-201ENST00000360413 USP35Q9P2H5 1018 aa17■□□□□ 0.31
SRGAP3-201ENST00000360413 DRC7Q8IY82 874 aa16.99■□□□□ 0.31
SRGAP3-201ENST00000360413 KIAA2012Q0VF49 1180 aa16.99■□□□□ 0.31
SRGAP3-201ENST00000360413 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
SRGAP3-201ENST00000360413 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
SRGAP3-201ENST00000360413 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
SRGAP3-201ENST00000360413 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
SRGAP3-201ENST00000360413 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
SRGAP3-201ENST00000360413 RBM19Q9Y4C8 960 aaKnown RBP16.97■□□□□ 0.31
SRGAP3-201ENST00000360413 NPHP1O15259 732 aa16.97■□□□□ 0.31
SRGAP3-201ENST00000360413 RGS3P49796 1198 aa16.97■□□□□ 0.31
SRGAP3-201ENST00000360413 MS4A1P11836 297 aa16.96■□□□□ 0.31
SRGAP3-201ENST00000360413 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
SRGAP3-201ENST00000360413 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
SRGAP3-201ENST00000360413 P3H3Q8IVL6 736 aa16.96■□□□□ 0.3
SRGAP3-201ENST00000360413 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
SRGAP3-201ENST00000360413 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
SRGAP3-201ENST00000360413 FTSJ3Q8IY81 847 aaKnown RBP16.95■□□□□ 0.3
SRGAP3-201ENST00000360413 ARID3CA6NKF2 412 aa16.94■□□□□ 0.3
SRGAP3-201ENST00000360413 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
SRGAP3-201ENST00000360413 HSCBQ8IWL3 235 aa16.93■□□□□ 0.3
SRGAP3-201ENST00000360413 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
SRGAP3-201ENST00000360413 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
SRGAP3-201ENST00000360413 FGD1P98174 961 aa16.9■□□□□ 0.3
SRGAP3-201ENST00000360413 GOLGA6L4A6NEF3 574 aa16.88■□□□□ 0.29
SRGAP3-201ENST00000360413 SPRYD3Q8NCJ5 442 aa16.88■□□□□ 0.29
SRGAP3-201ENST00000360413 SENP3-EIF4A1A0A087X0R7 540 aa16.87■□□□□ 0.29
SRGAP3-201ENST00000360413 RSPH6AQ9H0K4 717 aa16.87■□□□□ 0.29
SRGAP3-201ENST00000360413 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
SRGAP3-201ENST00000360413 PTMSP20962 102 aa16.85■□□□□ 0.29
SRGAP3-201ENST00000360413 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
SRGAP3-201ENST00000360413 GZF1Q9H116 711 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-201ENST00000360413 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
SRGAP3-201ENST00000360413 CCDC34Q96HJ3 373 aa16.84■□□□□ 0.29
SRGAP3-201ENST00000360413 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.29
SRGAP3-201ENST00000360413 MCCP23508 829 aa16.83■□□□□ 0.28
SRGAP3-201ENST00000360413 CALRP27797 417 aaKnown RBP16.83■□□□□ 0.28
SRGAP3-201ENST00000360413 GOLGA6L1Q8N7Z2 621 aa16.82■□□□□ 0.28
SRGAP3-201ENST00000360413 ABCC9O60706 1549 aa16.82■□□□□ 0.28
SRGAP3-201ENST00000360413 KCNJ4P48050 445 aa16.8■□□□□ 0.28
SRGAP3-201ENST00000360413 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-201ENST00000360413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.8■□□□□ 0.28
SRGAP3-201ENST00000360413 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
SRGAP3-201ENST00000360413 CLSTN1O94985 981 aa16.8■□□□□ 0.28
SRGAP3-201ENST00000360413 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
SRGAP3-201ENST00000360413 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
SRGAP3-201ENST00000360413 SETQ01105 290 aaPredicted RBP16.78■□□□□ 0.28
SRGAP3-201ENST00000360413 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
SRGAP3-201ENST00000360413 MAPK8IP3Q9UPT6 1336 aa16.78■□□□□ 0.28
SRGAP3-201ENST00000360413 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
SRGAP3-201ENST00000360413 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
SRGAP3-201ENST00000360413 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.28
SRGAP3-201ENST00000360413 OS9Q13438 667 aaPredicted RBP16.76■□□□□ 0.27
SRGAP3-201ENST00000360413 HTATSF1O43719 755 aaKnown RBP16.75■□□□□ 0.27
SRGAP3-201ENST00000360413 NAP1L2Q9ULW6 460 aaPredicted RBP16.75■□□□□ 0.27
SRGAP3-201ENST00000360413 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
SRGAP3-201ENST00000360413 FRAT1Q92837 279 aaPredicted RBP16.73■□□□□ 0.27
SRGAP3-201ENST00000360413 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
SRGAP3-201ENST00000360413 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
SRGAP3-201ENST00000360413 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
SRGAP3-201ENST00000360413 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
SRGAP3-201ENST00000360413 SYAP1Q96A49 352 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-201ENST00000360413 TPM4P67936 248 aa16.68■□□□□ 0.26
SRGAP3-201ENST00000360413 SLKQ9H2G2 1235 aaPredicted RBP16.68■□□□□ 0.26
SRGAP3-201ENST00000360413 A0A0U1RQG5 324 aaPredicted RBP16.67■□□□□ 0.26
SRGAP3-201ENST00000360413 ZNF771Q7L3S4 317 aaPredicted RBP16.67■□□□□ 0.26
SRGAP3-201ENST00000360413 PRM3Q9NNZ6 103 aa16.66■□□□□ 0.26
SRGAP3-201ENST00000360413 TIMELESSQ9UNS1 1208 aa16.65■□□□□ 0.26
SRGAP3-201ENST00000360413 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
SRGAP3-201ENST00000360413 TSHZ2Q9NRE2 1034 aa16.65■□□□□ 0.26
SRGAP3-201ENST00000360413 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
SRGAP3-201ENST00000360413 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
SRGAP3-201ENST00000360413 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
SRGAP3-201ENST00000360413 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
SRGAP3-201ENST00000360413 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms