RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 PPP1R15AO75807 674 aaPredicted RBP11.96□□□□□ -0.49
CD46-206ENST00000360212 VPS8Q8N3P4 1428 aa11.95□□□□□ -0.5
CD46-206ENST00000360212 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
CD46-206ENST00000360212 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
CD46-206ENST00000360212 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
CD46-206ENST00000360212 FAM9BQ8IZU0 186 aa11.9□□□□□ -0.51
CD46-206ENST00000360212 CCER2I3L3R5 266 aa11.88□□□□□ -0.51
CD46-206ENST00000360212 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
CD46-206ENST00000360212 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
CD46-206ENST00000360212 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
CD46-206ENST00000360212 RAB3GAP2Q9H2M9 1393 aa11.87□□□□□ -0.51
CD46-206ENST00000360212 FAM50AQ14320 339 aaKnown RBP11.86□□□□□ -0.51
CD46-206ENST00000360212 NACADO15069 1562 aa11.86□□□□□ -0.51
CD46-206ENST00000360212 CCDC184Q52MB2 194 aa11.86□□□□□ -0.51
CD46-206ENST00000360212 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
CD46-206ENST00000360212 ANP32AP39687 249 aaKnown RBP11.85□□□□□ -0.51
CD46-206ENST00000360212 RAPGEF2Q9Y4G8 1499 aa11.85□□□□□ -0.51
CD46-206ENST00000360212 EIF4G1Q04637 1599 aaKnown RBP11.84□□□□□ -0.51
CD46-206ENST00000360212 EEA1Q15075 1411 aa11.84□□□□□ -0.51
CD46-206ENST00000360212 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
CD46-206ENST00000360212 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
CD46-206ENST00000360212 ATP1B4Q9UN42 357 aaPredicted RBP11.82□□□□□ -0.52
CD46-206ENST00000360212 NEFMP07197 916 aa11.82□□□□□ -0.52
CD46-206ENST00000360212 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
CD46-206ENST00000360212 CCNB3Q8WWL7 1395 aa11.8□□□□□ -0.52
CD46-206ENST00000360212 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
CD46-206ENST00000360212 KIF21BO75037 1637 aa11.79□□□□□ -0.52
CD46-206ENST00000360212 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
CD46-206ENST00000360212 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
CD46-206ENST00000360212 MRS2Q9HD23 443 aa11.74□□□□□ -0.53
CD46-206ENST00000360212 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
CD46-206ENST00000360212 POLR3GLQ9BT43 218 aa11.7□□□□□ -0.54
CD46-206ENST00000360212 SMARCA2P51531 1590 aa11.69□□□□□ -0.54
CD46-206ENST00000360212 SLC4A3P48751 1232 aa11.68□□□□□ -0.54
CD46-206ENST00000360212 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
CD46-206ENST00000360212 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
CD46-206ENST00000360212 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
CD46-206ENST00000360212 SETD5Q9C0A6 1442 aa11.68□□□□□ -0.54
CD46-206ENST00000360212 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
CD46-206ENST00000360212 ARAP1Q96P48 1450 aa11.66□□□□□ -0.54
CD46-206ENST00000360212 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
CD46-206ENST00000360212 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
CD46-206ENST00000360212 TOP2AP11388 1531 aaKnown RBP11.64□□□□□ -0.55
CD46-206ENST00000360212 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
CD46-206ENST00000360212 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
CD46-206ENST00000360212 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
CD46-206ENST00000360212 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
CD46-206ENST00000360212 ARXQ96QS3 562 aa11.61□□□□□ -0.55
CD46-206ENST00000360212 FRAT1Q92837 279 aaPredicted RBP11.6□□□□□ -0.55
CD46-206ENST00000360212 C11orf95C9JLR9 678 aaPredicted RBP11.6□□□□□ -0.55
CD46-206ENST00000360212 GSE1Q14687 1217 aa11.58□□□□□ -0.55
CD46-206ENST00000360212 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.55
CD46-206ENST00000360212 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.55
CD46-206ENST00000360212 CUX2O14529 1486 aa11.58□□□□□ -0.56
CD46-206ENST00000360212 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
CD46-206ENST00000360212 ZBED9Q6R2W3 1325 aa11.58□□□□□ -0.56
CD46-206ENST00000360212 PDE4AP27815 886 aa11.57□□□□□ -0.56
CD46-206ENST00000360212 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
CD46-206ENST00000360212 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
CD46-206ENST00000360212 NFKBIBQ15653 356 aa11.54□□□□□ -0.56
CD46-206ENST00000360212 WASHC2CQ9Y4E1 1318 aa11.54□□□□□ -0.56
CD46-206ENST00000360212 FOXD1Q16676 465 aa11.53□□□□□ -0.56
CD46-206ENST00000360212 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
CD46-206ENST00000360212 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
CD46-206ENST00000360212 RSPH6AQ9H0K4 717 aa11.53□□□□□ -0.56
CD46-206ENST00000360212 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
CD46-206ENST00000360212 NUDCQ9Y266 331 aa11.51□□□□□ -0.57
CD46-206ENST00000360212 DCAF11Q8TEB1 546 aa11.51□□□□□ -0.57
CD46-206ENST00000360212 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
CD46-206ENST00000360212 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
CD46-206ENST00000360212 FRAT2O75474 233 aaPredicted RBP11.49□□□□□ -0.57
CD46-206ENST00000360212 PLIN1O60240 522 aa11.48□□□□□ -0.57
CD46-206ENST00000360212 BACH2Q9BYV9 841 aa11.48□□□□□ -0.57
CD46-206ENST00000360212 RRP7BPQ9NSQ0 103 aa11.48□□□□□ -0.57
CD46-206ENST00000360212 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
CD46-206ENST00000360212 ZNF326Q5BKZ1 582 aaKnown RBP11.47□□□□□ -0.57
CD46-206ENST00000360212 ARHGAP35Q9NRY4 1499 aa11.47□□□□□ -0.57
CD46-206ENST00000360212 CNTLNQ9NXG0 1405 aa11.45□□□□□ -0.58
CD46-206ENST00000360212 TCERG1O14776 1098 aaKnown RBP11.44□□□□□ -0.58
CD46-206ENST00000360212 L3MBTL2Q969R5 705 aa11.43□□□□□ -0.58
CD46-206ENST00000360212 NAP1L5Q96NT1 182 aaPredicted RBP11.43□□□□□ -0.58
CD46-206ENST00000360212 TMC1Q8TDI8 760 aa11.42□□□□□ -0.58
CD46-206ENST00000360212 SMG6Q86US8 1419 aaKnown RBP11.42□□□□□ -0.58
CD46-206ENST00000360212 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
CD46-206ENST00000360212 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
CD46-206ENST00000360212 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
CD46-206ENST00000360212 RRAGDQ9NQL2 400 aaPredicted RBP11.41□□□□□ -0.58
CD46-206ENST00000360212 RRP1P56182 461 aaKnown RBP11.4□□□□□ -0.58
CD46-206ENST00000360212 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
CD46-206ENST00000360212 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
CD46-206ENST00000360212 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.585e-23■■■■■ 36
CD46-206ENST00000360212 PDE4CQ08493 712 aa11.39□□□□□ -0.59
CD46-206ENST00000360212 LRRC9Q6ZRR7 1453 aa11.39□□□□□ -0.59
CD46-206ENST00000360212 POGKQ9P215 609 aa11.39□□□□□ -0.59
CD46-206ENST00000360212 CCDC18Q5T9S5 1454 aa11.38□□□□□ -0.59
CD46-206ENST00000360212 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
CD46-206ENST00000360212 NBPF8Q3BBV2 869 aa11.38□□□□□ -0.59
CD46-206ENST00000360212 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
CD46-206ENST00000360212 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
CD46-206ENST00000360212 RGS3P49796 1198 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms