RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 NPM2Q86SE8 214 aaKnown RBP15.17■□□□□ 0.02
TMC3-201ENST00000359440 SETD5Q9C0A6 1442 aa15.15■□□□□ 0.02
TMC3-201ENST00000359440 WIZO95785 1651 aa15.14■□□□□ 0.01
TMC3-201ENST00000359440 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
TMC3-201ENST00000359440 ZNF777Q9ULD5 760 aaPredicted RBP15.13■□□□□ 0.01
TMC3-201ENST00000359440 UPF2Q9HAU5 1272 aaKnown RBP15.11■□□□□ 0.01
TMC3-201ENST00000359440 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
TMC3-201ENST00000359440 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
TMC3-201ENST00000359440 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
TMC3-201ENST00000359440 ARID3CA6NKF2 412 aa15.07■□□□□ 0
TMC3-201ENST00000359440 IRX6P78412 446 aaPredicted RBP15.07■□□□□ 0
TMC3-201ENST00000359440 TSPY4P0CV99 314 aa15.06■□□□□ 0
TMC3-201ENST00000359440 TSPY10P0CW01 314 aa15.06■□□□□ 0
TMC3-201ENST00000359440 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
TMC3-201ENST00000359440 NBR1Q14596 966 aa15.06■□□□□ 0
TMC3-201ENST00000359440 NEFMP07197 916 aa15.05■□□□□ 0
TMC3-201ENST00000359440 FBLN2P98095 1184 aa15.05■□□□□ -0
TMC3-201ENST00000359440 RRP7BPQ9NSQ0 103 aa15.05■□□□□ -0
TMC3-201ENST00000359440 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
TMC3-201ENST00000359440 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
TMC3-201ENST00000359440 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
TMC3-201ENST00000359440 RAB3GAP2Q9H2M9 1393 aa15.02■□□□□ -0
TMC3-201ENST00000359440 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
TMC3-201ENST00000359440 WDR43Q15061 677 aaKnown RBP eCLIP15.01□□□□□ -0.01
TMC3-201ENST00000359440 DHX57Q6P158 1386 aaKnown RBP15□□□□□ -0.01
TMC3-201ENST00000359440 TSHZ2Q9NRE2 1034 aa15□□□□□ -0.01
TMC3-201ENST00000359440 KANK4Q5T7N3 995 aaPredicted RBP14.99□□□□□ -0.01
TMC3-201ENST00000359440 CUX2O14529 1486 aa14.99□□□□□ -0.01
TMC3-201ENST00000359440 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
TMC3-201ENST00000359440 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
TMC3-201ENST00000359440 ANP32BQ92688 251 aaKnown RBP14.98□□□□□ -0.01
TMC3-201ENST00000359440 GLIPR1L2Q4G1C9 344 aa14.96□□□□□ -0.01
TMC3-201ENST00000359440 PPP1R15AO75807 674 aaPredicted RBP14.96□□□□□ -0.02
TMC3-201ENST00000359440 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
TMC3-201ENST00000359440 FMN1Q68DA7 1419 aa14.93□□□□□ -0.02
TMC3-201ENST00000359440 BECN1Q14457 450 aa14.92□□□□□ -0.02
TMC3-201ENST00000359440 SALL2Q9Y467 1007 aaPredicted RBP14.92□□□□□ -0.02
TMC3-201ENST00000359440 EIF5BO60841 1220 aaKnown RBP14.91□□□□□ -0.02
TMC3-201ENST00000359440 CDCA8Q53HL2 280 aa14.91□□□□□ -0.02
TMC3-201ENST00000359440 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
TMC3-201ENST00000359440 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
TMC3-201ENST00000359440 HSP90AA1P07900 732 aaKnown RBP14.87□□□□□ -0.03
TMC3-201ENST00000359440 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
TMC3-201ENST00000359440 CFDP1Q9UEE9 299 aaPredicted RBP14.87□□□□□ -0.03
TMC3-201ENST00000359440 HSPA5P11021 654 aaKnown RBP14.86□□□□□ -0.03
TMC3-201ENST00000359440 PLEKHD1A6NEE1 506 aa14.86□□□□□ -0.03
TMC3-201ENST00000359440 RUSC2Q8N2Y8 1516 aa14.85□□□□□ -0.03
TMC3-201ENST00000359440 KIF21BO75037 1637 aa14.84□□□□□ -0.03
TMC3-201ENST00000359440 B4GALNT3Q6L9W6 998 aa14.84□□□□□ -0.03
TMC3-201ENST00000359440 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
TMC3-201ENST00000359440 ATAD2BQ9ULI0 1458 aa14.82□□□□□ -0.04
TMC3-201ENST00000359440 CHMP7Q8WUX9 453 aaPredicted RBP14.8□□□□□ -0.04
TMC3-201ENST00000359440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMC3-201ENST00000359440 KNSTRNQ9Y448 316 aa14.79□□□□□ -0.04
TMC3-201ENST00000359440 DEKP35659 375 aaKnown RBP14.78□□□□□ -0.04
TMC3-201ENST00000359440 TCERG1O14776 1098 aaKnown RBP14.77□□□□□ -0.05
TMC3-201ENST00000359440 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
TMC3-201ENST00000359440 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
TMC3-201ENST00000359440 RALBP1Q15311 655 aa14.75□□□□□ -0.05
TMC3-201ENST00000359440 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
TMC3-201ENST00000359440 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
TMC3-201ENST00000359440 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
TMC3-201ENST00000359440 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
TMC3-201ENST00000359440 CFAP53Q96M91 514 aa14.72□□□□□ -0.05
TMC3-201ENST00000359440 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
TMC3-201ENST00000359440 RRBP1Q9P2E9 1410 aaKnown RBP14.71□□□□□ -0.05
TMC3-201ENST00000359440 TMF1P82094 1093 aa14.7□□□□□ -0.06
TMC3-201ENST00000359440 CHGAP10645 457 aaKnown RBP14.7□□□□□ -0.06
TMC3-201ENST00000359440 MS4A1P11836 297 aa14.7□□□□□ -0.06
TMC3-201ENST00000359440 KTN1Q86UP2 1357 aaKnown RBP14.69□□□□□ -0.06
TMC3-201ENST00000359440 GOLGA6L22H0YM25 854 aa14.69□□□□□ -0.06
TMC3-201ENST00000359440 IPO9Q96P70 1041 aaKnown RBP14.69□□□□□ -0.06
TMC3-201ENST00000359440 CADPSQ9ULU8 1353 aa14.69□□□□□ -0.06
TMC3-201ENST00000359440 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
TMC3-201ENST00000359440 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
TMC3-201ENST00000359440 RGL3Q3MIN7 710 aa14.67□□□□□ -0.06
TMC3-201ENST00000359440 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
TMC3-201ENST00000359440 TRIM44Q96DX7 344 aaPredicted RBP14.66□□□□□ -0.06
TMC3-201ENST00000359440 RCAN3Q9UKA8 241 aa14.66□□□□□ -0.06
TMC3-201ENST00000359440 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
TMC3-201ENST00000359440 CCDC18Q5T9S5 1454 aa14.66□□□□□ -0.06
TMC3-201ENST00000359440 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
TMC3-201ENST00000359440 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
TMC3-201ENST00000359440 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
TMC3-201ENST00000359440 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
TMC3-201ENST00000359440 PHLDB1Q86UU1 1377 aa14.64□□□□□ -0.07
TMC3-201ENST00000359440 ANKRD30AQ9BXX3 1397 aa14.63□□□□□ -0.07
TMC3-201ENST00000359440 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
TMC3-201ENST00000359440 L1TD1Q5T7N2 865 aaKnown RBP14.62□□□□□ -0.07
TMC3-201ENST00000359440 PRKRIP1Q9H875 184 aaPredicted RBP14.62□□□□□ -0.07
TMC3-201ENST00000359440 PKD2Q13563 968 aa14.62□□□□□ -0.07
TMC3-201ENST00000359440 KCNH8Q96L42 1107 aa14.62□□□□□ -0.07
TMC3-201ENST00000359440 UACAQ9BZF9 1416 aa14.61□□□□□ -0.07
TMC3-201ENST00000359440 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
TMC3-201ENST00000359440 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMC3-201ENST00000359440 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
TMC3-201ENST00000359440 PDS5BQ9NTI5 1447 aa14.6□□□□□ -0.07
TMC3-201ENST00000359440 CUX1P39880 1505 aa14.6□□□□□ -0.07
TMC3-201ENST00000359440 RGS3P49796 1198 aa14.59□□□□□ -0.07
TMC3-201ENST00000359440 KIF15Q9NS87 1388 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms