RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 TSPY4P0CV99 314 aa19.06■□□□□ 0.64
NUP98-203ENST00000359171 TSPY10P0CW01 314 aa19.06■□□□□ 0.64
NUP98-203ENST00000359171 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
NUP98-203ENST00000359171 DNTTIP2Q5QJE6 756 aaKnown RBP19.03■□□□□ 0.64
NUP98-203ENST00000359171 NAP1L5Q96NT1 182 aaPredicted RBP19.02■□□□□ 0.64
NUP98-203ENST00000359171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.635e-7■■■■□ 19.3
NUP98-203ENST00000359171 ZRSR1Q15695 479 aaKnown RBP19.02■□□□□ 0.63
NUP98-203ENST00000359171 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.63
NUP98-203ENST00000359171 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
NUP98-203ENST00000359171 NOP58Q9Y2X3 529 aaKnown RBP19■□□□□ 0.63
NUP98-203ENST00000359171 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
NUP98-203ENST00000359171 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
NUP98-203ENST00000359171 CASC1Q6TDU7 716 aa18.97■□□□□ 0.63
NUP98-203ENST00000359171 CFAP53Q96M91 514 aa18.94■□□□□ 0.62
NUP98-203ENST00000359171 LAS1LQ9Y4W2 734 aaKnown RBP18.93■□□□□ 0.62
NUP98-203ENST00000359171 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
NUP98-203ENST00000359171 CLIP1P30622 1438 aa18.92■□□□□ 0.62
NUP98-203ENST00000359171 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
NUP98-203ENST00000359171 RTN4Q9NQC3 1192 aaKnown RBP18.89■□□□□ 0.61
NUP98-203ENST00000359171 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
NUP98-203ENST00000359171 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
NUP98-203ENST00000359171 CHMP4BQ9H444 224 aaKnown RBP18.84■□□□□ 0.61
NUP98-203ENST00000359171 GOLGA6L6A8MZA4 724 aa18.84■□□□□ 0.61
NUP98-203ENST00000359171 NRDCO43847 1150 aa18.83■□□□□ 0.6
NUP98-203ENST00000359171 L1TD1Q5T7N2 865 aaKnown RBP18.83■□□□□ 0.6
NUP98-203ENST00000359171 RRP7BPQ9NSQ0 103 aa18.82■□□□□ 0.6
NUP98-203ENST00000359171 RGS3P49796 1198 aa18.82■□□□□ 0.6
NUP98-203ENST00000359171 MS4A1P11836 297 aa18.8■□□□□ 0.6
NUP98-203ENST00000359171 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
NUP98-203ENST00000359171 HSP90AB1P08238 724 aaKnown RBP18.78■□□□□ 0.6
NUP98-203ENST00000359171 PLCB2Q00722 1185 aa18.78■□□□□ 0.6
NUP98-203ENST00000359171 CHAF1AQ13111 956 aaPredicted RBP18.77■□□□□ 0.6
NUP98-203ENST00000359171 EEA1Q15075 1411 aa18.77■□□□□ 0.59
NUP98-203ENST00000359171 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.59
NUP98-203ENST00000359171 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
NUP98-203ENST00000359171 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
NUP98-203ENST00000359171 NUDCQ9Y266 331 aa18.73■□□□□ 0.59
NUP98-203ENST00000359171 MSNP26038 577 aaKnown RBP18.73■□□□□ 0.59
NUP98-203ENST00000359171 HSCBQ8IWL3 235 aa18.72■□□□□ 0.59
NUP98-203ENST00000359171 CEP162Q5TB80 1403 aa18.71■□□□□ 0.59
NUP98-203ENST00000359171 TPRNQ4KMQ1 711 aa18.71■□□□□ 0.59
NUP98-203ENST00000359171 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
NUP98-203ENST00000359171 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
NUP98-203ENST00000359171 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
NUP98-203ENST00000359171 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
NUP98-203ENST00000359171 RGL3Q3MIN7 710 aa18.68■□□□□ 0.58
NUP98-203ENST00000359171 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
NUP98-203ENST00000359171 SENP3-EIF4A1A0A087X0R7 540 aa18.68■□□□□ 0.58
NUP98-203ENST00000359171 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
NUP98-203ENST00000359171 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
NUP98-203ENST00000359171 RBM19Q9Y4C8 960 aaKnown RBP18.67■□□□□ 0.58
NUP98-203ENST00000359171 CCER2I3L3R5 266 aa18.66■□□□□ 0.58
NUP98-203ENST00000359171 GOLGA6L4A6NEF3 574 aa18.66■□□□□ 0.58
NUP98-203ENST00000359171 CFAP44Q96MT7 982 aa18.65■□□□□ 0.58
NUP98-203ENST00000359171 C14orf37Q86TY3 774 aa18.64■□□□□ 0.57
NUP98-203ENST00000359171 ZBTB7CA1YPR0 619 aa18.63■□□□□ 0.57
NUP98-203ENST00000359171 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
NUP98-203ENST00000359171 CCDC180Q9P1Z9 1646 aa18.63■□□□□ 0.57
NUP98-203ENST00000359171 FGD1P98174 961 aa18.63■□□□□ 0.57
NUP98-203ENST00000359171 PLEKHD1A6NEE1 506 aa18.62■□□□□ 0.57
NUP98-203ENST00000359171 A0A0G2JS52 829 aa18.62■□□□□ 0.57
NUP98-203ENST00000359171 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
NUP98-203ENST00000359171 PTMSP20962 102 aa18.61■□□□□ 0.57
NUP98-203ENST00000359171 KCNJ4P48050 445 aa18.59■□□□□ 0.57
NUP98-203ENST00000359171 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
NUP98-203ENST00000359171 MCCP23508 829 aa18.58■□□□□ 0.56
NUP98-203ENST00000359171 TNIKQ9UKE5 1360 aa18.57■□□□□ 0.56
NUP98-203ENST00000359171 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
NUP98-203ENST00000359171 OS9Q13438 667 aaPredicted RBP18.56■□□□□ 0.56
NUP98-203ENST00000359171 SIN3AQ96ST3 1273 aa18.56■□□□□ 0.56
NUP98-203ENST00000359171 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
NUP98-203ENST00000359171 GBP4Q96PP9 640 aa18.55■□□□□ 0.56
NUP98-203ENST00000359171 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
NUP98-203ENST00000359171 DRC7Q8IY82 874 aa18.52■□□□□ 0.55
NUP98-203ENST00000359171 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
NUP98-203ENST00000359171 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
NUP98-203ENST00000359171 HAP1P54257 671 aaPredicted RBP18.51■□□□□ 0.55
NUP98-203ENST00000359171 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
NUP98-203ENST00000359171 TMF1P82094 1093 aa18.49■□□□□ 0.55
NUP98-203ENST00000359171 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
NUP98-203ENST00000359171 NAP1L2Q9ULW6 460 aaPredicted RBP18.47■□□□□ 0.55
NUP98-203ENST00000359171 CEP164Q9UPV0 1460 aa18.45■□□□□ 0.54
NUP98-203ENST00000359171 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
NUP98-203ENST00000359171 KCNH8Q96L42 1107 aa18.45■□□□□ 0.54
NUP98-203ENST00000359171 POGKQ9P215 609 aa18.45■□□□□ 0.54
NUP98-203ENST00000359171 SPRYD3Q8NCJ5 442 aa18.44■□□□□ 0.54
NUP98-203ENST00000359171 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
NUP98-203ENST00000359171 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
NUP98-203ENST00000359171 SYAP1Q96A49 352 aaPredicted RBP18.43■□□□□ 0.54
NUP98-203ENST00000359171 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
NUP98-203ENST00000359171 TAOK2Q9UL54 1235 aa18.42■□□□□ 0.54
NUP98-203ENST00000359171 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
NUP98-203ENST00000359171 GOLGA6L3A6NEY3 463 aa18.41■□□□□ 0.54
NUP98-203ENST00000359171 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
NUP98-203ENST00000359171 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
NUP98-203ENST00000359171 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
NUP98-203ENST00000359171 IPO9Q96P70 1041 aaKnown RBP18.39■□□□□ 0.54
NUP98-203ENST00000359171 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
NUP98-203ENST00000359171 TSHZ2Q9NRE2 1034 aa18.39■□□□□ 0.53
NUP98-203ENST00000359171 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms