RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 TSHZ2Q9NRE2 1034 aa27■■□□□ 1.91
EDC4-201ENST00000358933 NAP1L5Q96NT1 182 aaPredicted RBP26.96■■□□□ 1.91
EDC4-201ENST00000358933 ABCC9O60706 1549 aa26.96■■□□□ 1.91
EDC4-201ENST00000358933 TNNT2P45379 298 aaPredicted RBP26.94■■□□□ 1.9
EDC4-201ENST00000358933 SLC24A1O60721 1099 aa26.93■■□□□ 1.9
EDC4-201ENST00000358933 CHIC2Q9UKJ5 165 aa26.93■■□□□ 1.9
EDC4-201ENST00000358933 B4GALNT3Q6L9W6 998 aa26.91■■□□□ 1.9
EDC4-201ENST00000358933 GOLGA6L22H0YM25 854 aa26.88■■□□□ 1.89
EDC4-201ENST00000358933 EEA1Q15075 1411 aa26.86■■□□□ 1.89
EDC4-201ENST00000358933 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
EDC4-201ENST00000358933 CCER2I3L3R5 266 aa26.8■■□□□ 1.88
EDC4-201ENST00000358933 TNIKQ9UKE5 1360 aa26.8■■□□□ 1.88
EDC4-201ENST00000358933 MTUS2Q5JR59 1369 aa26.74■■□□□ 1.87
EDC4-201ENST00000358933 KDM2AQ9Y2K7 1162 aa26.74■■□□□ 1.87
EDC4-201ENST00000358933 FBLN2P98095 1184 aa26.71■■□□□ 1.87
EDC4-201ENST00000358933 SENP3-EIF4A1A0A087X0R7 540 aa26.7■■□□□ 1.86
EDC4-201ENST00000358933 NCLP19338 710 aaKnown RBP26.68■■□□□ 1.86
EDC4-201ENST00000358933 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
EDC4-201ENST00000358933 PTMAP06454 111 aaKnown RBP26.67■■□□□ 1.86
EDC4-201ENST00000358933 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
EDC4-201ENST00000358933 MYH16Q9H6N6 1097 aa26.65■■□□□ 1.86
EDC4-201ENST00000358933 L1TD1Q5T7N2 865 aaKnown RBP26.65■■□□□ 1.86
EDC4-201ENST00000358933 DNTTIP2Q5QJE6 756 aaKnown RBP26.64■■□□□ 1.86
EDC4-201ENST00000358933 RGS3P49796 1198 aa26.63■■□□□ 1.85
EDC4-201ENST00000358933 RRP7BPQ9NSQ0 103 aa26.63■■□□□ 1.85
EDC4-201ENST00000358933 TIMELESSQ9UNS1 1208 aa26.6■■□□□ 1.85
EDC4-201ENST00000358933 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
EDC4-201ENST00000358933 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.56■■□□□ 1.84
EDC4-201ENST00000358933 CHGAP10645 457 aaKnown RBP26.52■■□□□ 1.84
EDC4-201ENST00000358933 TSPY4P0CV99 314 aa26.51■■□□□ 1.84
EDC4-201ENST00000358933 TSPY10P0CW01 314 aa26.51■■□□□ 1.84
EDC4-201ENST00000358933 IPO9Q96P70 1041 aaKnown RBP26.48■■□□□ 1.83
EDC4-201ENST00000358933 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.48■■□□□ 1.833e-6■■■■□ 20.5
EDC4-201ENST00000358933 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
EDC4-201ENST00000358933 PNNQ9H307 717 aaKnown RBP26.42■■□□□ 1.82
EDC4-201ENST00000358933 TCERG1O14776 1098 aaKnown RBP26.42■■□□□ 1.82
EDC4-201ENST00000358933 CCNB3Q8WWL7 1395 aa26.41■■□□□ 1.82
EDC4-201ENST00000358933 CDK11BP21127 795 aaKnown RBP26.41■■□□□ 1.82
EDC4-201ENST00000358933 CARD11Q9BXL7 1154 aa26.4■■□□□ 1.82
EDC4-201ENST00000358933 MSNP26038 577 aaKnown RBP26.39■■□□□ 1.81
EDC4-201ENST00000358933 KNSTRNQ9Y448 316 aa26.39■■□□□ 1.81
EDC4-201ENST00000358933 FTSJ3Q8IY81 847 aaKnown RBP26.39■■□□□ 1.81
EDC4-201ENST00000358933 HSP90AB1P08238 724 aaKnown RBP26.36■■□□□ 1.81
EDC4-201ENST00000358933 WRNQ14191 1432 aaPredicted RBP eCLIP26.33■■□□□ 1.81
EDC4-201ENST00000358933 CDCA8Q53HL2 280 aa26.32■■□□□ 1.8
EDC4-201ENST00000358933 CASC1Q6TDU7 716 aa26.32■■□□□ 1.8
EDC4-201ENST00000358933 HSCBQ8IWL3 235 aa26.31■■□□□ 1.8
EDC4-201ENST00000358933 USP35Q9P2H5 1018 aa26.31■■□□□ 1.8
EDC4-201ENST00000358933 FRAT1Q92837 279 aaPredicted RBP26.29■■□□□ 1.8
EDC4-201ENST00000358933 CFAP53Q96M91 514 aa26.28■■□□□ 1.8
EDC4-201ENST00000358933 FANCIQ9NVI1 1328 aa26.28■■□□□ 1.8
EDC4-201ENST00000358933 ARID4BQ4LE39 1312 aaPredicted RBP26.28■■□□□ 1.8
EDC4-201ENST00000358933 PLCB2Q00722 1185 aa26.25■■□□□ 1.79
EDC4-201ENST00000358933 RGL3Q3MIN7 710 aa26.24■■□□□ 1.79
EDC4-201ENST00000358933 HSPA5P11021 654 aaKnown RBP26.22■■□□□ 1.79
EDC4-201ENST00000358933 CHAF1AQ13111 956 aaPredicted RBP26.22■■□□□ 1.79
EDC4-201ENST00000358933 MS4A1P11836 297 aa26.22■■□□□ 1.79
EDC4-201ENST00000358933 RSPH6AQ9H0K4 717 aa26.21■■□□□ 1.79
EDC4-201ENST00000358933 NEUROD2Q15784 382 aa26.21■■□□□ 1.79
EDC4-201ENST00000358933 ZRSR1Q15695 479 aaKnown RBP26.2■■□□□ 1.78
EDC4-201ENST00000358933 RCAN3Q9UKA8 241 aa26.2■■□□□ 1.78
EDC4-201ENST00000358933 SETD5Q9C0A6 1442 aa26.19■■□□□ 1.78
EDC4-201ENST00000358933 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
EDC4-201ENST00000358933 TPRNQ4KMQ1 711 aa26.17■■□□□ 1.78
EDC4-201ENST00000358933 SPRYD3Q8NCJ5 442 aa26.17■■□□□ 1.78
EDC4-201ENST00000358933 SLKQ9H2G2 1235 aaPredicted RBP26.16■■□□□ 1.78
EDC4-201ENST00000358933 VPS8Q8N3P4 1428 aa26.16■■□□□ 1.78
EDC4-201ENST00000358933 GOLGA6L3A6NEY3 463 aa26.15■■□□□ 1.78
EDC4-201ENST00000358933 CHMP4BQ9H444 224 aaKnown RBP26.15■■□□□ 1.78
EDC4-201ENST00000358933 NUDCQ9Y266 331 aa26.15■■□□□ 1.78
EDC4-201ENST00000358933 CC2D1BQ5T0F9 858 aaKnown RBP26.15■■□□□ 1.78
EDC4-201ENST00000358933 GZF1Q9H116 711 aaPredicted RBP26.14■■□□□ 1.78
EDC4-201ENST00000358933 RB1CC1Q8TDY2 1594 aa26.14■■□□□ 1.77
EDC4-201ENST00000358933 GBP4Q96PP9 640 aa26.12■■□□□ 1.77
EDC4-201ENST00000358933 PTMSP20962 102 aa26.12■■□□□ 1.77
EDC4-201ENST00000358933 HSP90AA2PQ14568 343 aaPredicted RBP26.11■■□□□ 1.77
EDC4-201ENST00000358933 KIF27Q86VH2 1401 aa26.1■■□□□ 1.77
EDC4-201ENST00000358933 PPP1R15AO75807 674 aaPredicted RBP26.08■■□□□ 1.77
EDC4-201ENST00000358933 GSE1Q14687 1217 aa26.07■■□□□ 1.76
EDC4-201ENST00000358933 KCNH8Q96L42 1107 aa26.07■■□□□ 1.76
EDC4-201ENST00000358933 SOGA1O94964 1423 aa26.05■■□□□ 1.76
EDC4-201ENST00000358933 MAPK8IP3Q9UPT6 1336 aa26.05■■□□□ 1.76
EDC4-201ENST00000358933 NRDCO43847 1150 aa26.03■■□□□ 1.76
EDC4-201ENST00000358933 RAB3GAP2Q9H2M9 1393 aa26.03■■□□□ 1.76
EDC4-201ENST00000358933 GOLGA6L6A8MZA4 724 aa26.03■■□□□ 1.76
EDC4-201ENST00000358933 VSIG10Q8N0Z9 540 aa26.01■■□□□ 1.75
EDC4-201ENST00000358933 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
EDC4-201ENST00000358933 KIAA2012Q0VF49 1180 aa25.98■■□□□ 1.75
EDC4-201ENST00000358933 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
EDC4-201ENST00000358933 TMF1P82094 1093 aa25.97■■□□□ 1.75
EDC4-201ENST00000358933 KANK4Q5T7N3 995 aaPredicted RBP25.97■■□□□ 1.75
EDC4-201ENST00000358933 ARID3AQ99856 593 aa25.96■■□□□ 1.75
EDC4-201ENST00000358933 CFAP44Q96MT7 982 aa25.96■■□□□ 1.75
EDC4-201ENST00000358933 ESF1Q9H501 851 aaKnown RBP25.96■■□□□ 1.75
EDC4-201ENST00000358933 PDE4AP27815 886 aa25.95■■□□□ 1.74
EDC4-201ENST00000358933 RALBP1Q15311 655 aa25.94■■□□□ 1.74
EDC4-201ENST00000358933 KTN1Q86UP2 1357 aaKnown RBP25.94■■□□□ 1.74
EDC4-201ENST00000358933 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
EDC4-201ENST00000358933 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
EDC4-201ENST00000358933 GOLGA6L4A6NEF3 574 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms