RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 C7P10643 843 aa7.26□□□□□ -1.25
CNGA1-201ENST00000358519 SLC39A7Q92504 469 aa7.25□□□□□ -1.25
CNGA1-201ENST00000358519 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
CNGA1-201ENST00000358519 PAK3O75914 559 aaPredicted RBP7.23□□□□□ -1.25
CNGA1-201ENST00000358519 POTEJP0CG39 1038 aa7.23□□□□□ -1.25
CNGA1-201ENST00000358519 SCUBE2Q9NQ36 999 aa7.23□□□□□ -1.25
CNGA1-201ENST00000358519 CDAN1Q8IWY9 1227 aa7.21□□□□□ -1.26
CNGA1-201ENST00000358519 ASTLQ6HA08 431 aaPredicted RBP7.2□□□□□ -1.26
CNGA1-201ENST00000358519 PHF12Q96QT6 1004 aa7.19□□□□□ -1.26
CNGA1-201ENST00000358519 NACADO15069 1562 aa7.18□□□□□ -1.26
CNGA1-201ENST00000358519 CREBZFQ9NS37 354 aa7.18□□□□□ -1.26
CNGA1-201ENST00000358519 ATMINO43313 823 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-201ENST00000358519 STAG3Q9UJ98 1225 aa7.12□□□□□ -1.27
CNGA1-201ENST00000358519 ZBTB22O15209 634 aa7.12□□□□□ -1.27
CNGA1-201ENST00000358519 NPM1P06748 294 aaKnown RBP eCLIP7.09□□□□□ -1.27
CNGA1-201ENST00000358519 MMRN1Q13201 1228 aa7.09□□□□□ -1.27
CNGA1-201ENST00000358519 MS4A3Q96HJ5 214 aa7.08□□□□□ -1.28
CNGA1-201ENST00000358519 CECR2Q9BXF3 1484 aa7.07□□□□□ -1.28
CNGA1-201ENST00000358519 SHROOM4Q9ULL8 1493 aa7.07□□□□□ -1.28
CNGA1-201ENST00000358519 DCAF8L2P0C7V8 631 aa7.06□□□□□ -1.28
CNGA1-201ENST00000358519 SPNS2Q8IVW8 549 aa7.05□□□□□ -1.28
CNGA1-201ENST00000358519 ATN1P54259 1190 aaPredicted RBP7.03□□□□□ -1.28
CNGA1-201ENST00000358519 UNC13AQ9UPW8 1703 aa7.03□□□□□ -1.28
CNGA1-201ENST00000358519 BICRAQ9NZM4 1560 aa7.01□□□□□ -1.29
CNGA1-201ENST00000358519 POTEFA5A3E0 1075 aa7.01□□□□□ -1.29
CNGA1-201ENST00000358519 CC2D2AQ9P2K1 1620 aa7□□□□□ -1.29
CNGA1-201ENST00000358519 ST18O60284 1047 aa6.98□□□□□ -1.29
CNGA1-201ENST00000358519 MNX1P50219 401 aaPredicted RBP6.96□□□□□ -1.3
CNGA1-201ENST00000358519 BMP2KQ9NSY1 1161 aaPredicted RBP6.94□□□□□ -1.3
CNGA1-201ENST00000358519 SEC24BO95487 1268 aa6.93□□□□□ -1.3
CNGA1-201ENST00000358519 TIE1P35590 1138 aa6.92□□□□□ -1.3
CNGA1-201ENST00000358519 TMEM121BQ9BXQ6 578 aaPredicted RBP6.92□□□□□ -1.3
CNGA1-201ENST00000358519 CUX2O14529 1486 aa6.92□□□□□ -1.3
CNGA1-201ENST00000358519 SLAIN1Q8ND83 568 aa6.91□□□□□ -1.3
CNGA1-201ENST00000358519 EIF4G1Q04637 1599 aaKnown RBP6.91□□□□□ -1.3
CNGA1-201ENST00000358519 COLQQ9Y215 455 aaPredicted RBP6.9□□□□□ -1.31
CNGA1-201ENST00000358519 KIF12Q96FN5 646 aa6.89□□□□□ -1.31
CNGA1-201ENST00000358519 IER5LQ5T953 404 aa6.88□□□□□ -1.31
CNGA1-201ENST00000358519 CCDC61Q9Y6R9 512 aa6.87□□□□□ -1.31
CNGA1-201ENST00000358519 SNPHO15079 494 aa6.86□□□□□ -1.31
CNGA1-201ENST00000358519 TSPYL2Q9H2G4 693 aaPredicted RBP6.85□□□□□ -1.31
CNGA1-201ENST00000358519 TRIM41Q8WV44 630 aa6.84□□□□□ -1.31
CNGA1-201ENST00000358519 TRPC6Q9Y210 931 aa6.83□□□□□ -1.32
CNGA1-201ENST00000358519 TTLL13PA6NNM8 815 aa6.82□□□□□ -1.32
CNGA1-201ENST00000358519 ERCC6Q03468 1493 aa6.81□□□□□ -1.32
CNGA1-201ENST00000358519 MAP3K13O43283 966 aa6.79□□□□□ -1.32
CNGA1-201ENST00000358519 TRIM35Q9UPQ4 493 aa6.77□□□□□ -1.33
CNGA1-201ENST00000358519 SCRIBQ14160 1630 aa6.76□□□□□ -1.33
CNGA1-201ENST00000358519 MARVELD3Q96A59 401 aa6.76□□□□□ -1.33
CNGA1-201ENST00000358519 PEG3Q9GZU2 1588 aa6.75□□□□□ -1.33
CNGA1-201ENST00000358519 BAZ1AQ9NRL2 1556 aaPredicted RBP6.75□□□□□ -1.33
CNGA1-201ENST00000358519 PLCG2P16885 1265 aa6.74□□□□□ -1.33
CNGA1-201ENST00000358519 SGIP1Q9BQI5 828 aa6.74□□□□□ -1.33
CNGA1-201ENST00000358519 SPDYE4A6NLX3 237 aa6.74□□□□□ -1.33
CNGA1-201ENST00000358519 KRTAP3-3Q9BYR6 98 aa6.73□□□□□ -1.33
CNGA1-201ENST00000358519 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
CNGA1-201ENST00000358519 SMARCA2P51531 1590 aa6.71□□□□□ -1.33
CNGA1-201ENST00000358519 EMP3P54852 163 aa6.71□□□□□ -1.34
CNGA1-201ENST00000358519 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.71□□□□□ -1.34
CNGA1-201ENST00000358519 HRCP23327 699 aa6.68□□□□□ -1.34
CNGA1-201ENST00000358519 IRX5P78411 483 aaPredicted RBP6.67□□□□□ -1.34
CNGA1-201ENST00000358519 HS3ST6Q96QI5 342 aa6.67□□□□□ -1.34
CNGA1-201ENST00000358519 SMARCA4P51532 1647 aa6.66□□□□□ -1.34
CNGA1-201ENST00000358519 POTEB3A0JP26 581 aa6.65□□□□□ -1.34
CNGA1-201ENST00000358519 POTEBQ6S5H4 581 aa6.65□□□□□ -1.34
CNGA1-201ENST00000358519 OCEL1Q9H607 264 aa6.65□□□□□ -1.34
CNGA1-201ENST00000358519 PCDHB13Q9Y5F0 798 aa6.65□□□□□ -1.34
CNGA1-201ENST00000358519 FAM205CA6NFA0 338 aa6.63□□□□□ -1.35
CNGA1-201ENST00000358519 TMEM106CQ9BVX2 250 aa6.63□□□□□ -1.35
CNGA1-201ENST00000358519 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
CNGA1-201ENST00000358519 RNF166Q96A37 237 aaPredicted RBP6.62□□□□□ -1.35
CNGA1-201ENST00000358519 HMGXB3Q12766 1538 aa6.62□□□□□ -1.35
CNGA1-201ENST00000358519 TOP2AP11388 1531 aaKnown RBP6.61□□□□□ -1.35
CNGA1-201ENST00000358519 PLEKHG5O94827 1062 aa6.61□□□□□ -1.35
CNGA1-201ENST00000358519 NCAPD3P42695 1498 aa6.6□□□□□ -1.35
CNGA1-201ENST00000358519 MYT1Q01538 1121 aa6.59□□□□□ -1.36
CNGA1-201ENST00000358519 PRDM2Q13029 1718 aa6.58□□□□□ -1.36
CNGA1-201ENST00000358519 RSF1Q96T23 1441 aaPredicted RBP6.58□□□□□ -1.36
CNGA1-201ENST00000358519 IFNL1Q8IU54 200 aa6.57□□□□□ -1.36
CNGA1-201ENST00000358519 THOC2Q8NI27 1593 aaKnown RBP6.57□□□□□ -1.36
CNGA1-201ENST00000358519 NESP48681 1621 aa6.55□□□□□ -1.36
CNGA1-201ENST00000358519 C3orf67Q6ZVT6 689 aa6.54□□□□□ -1.36
CNGA1-201ENST00000358519 MYT1LQ9UL68 1186 aa6.54□□□□□ -1.36
CNGA1-201ENST00000358519 PPARGC1BQ86YN6 1023 aaKnown RBP6.54□□□□□ -1.36
CNGA1-201ENST00000358519 L3MBTL3Q96JM7 780 aaPredicted RBP6.54□□□□□ -1.36
CNGA1-201ENST00000358519 PDS5BQ9NTI5 1447 aa6.53□□□□□ -1.36
CNGA1-201ENST00000358519 MROH2BQ7Z745 1585 aa6.52□□□□□ -1.37
CNGA1-201ENST00000358519 LAMC3Q9Y6N6 1575 aa6.52□□□□□ -1.37
CNGA1-201ENST00000358519 MIER1Q8N108 512 aa6.51□□□□□ -1.37
CNGA1-201ENST00000358519 PTGER2P43116 358 aa6.5□□□□□ -1.37
CNGA1-201ENST00000358519 PROM2Q8N271 834 aa6.5□□□□□ -1.37
CNGA1-201ENST00000358519 ATAD2BQ9ULI0 1458 aa6.5□□□□□ -1.37
CNGA1-201ENST00000358519 WIZO95785 1651 aa6.48□□□□□ -1.37
CNGA1-201ENST00000358519 HOXB1P14653 301 aaPredicted RBP6.46□□□□□ -1.37
CNGA1-201ENST00000358519 ERBB3P21860 1342 aa6.46□□□□□ -1.37
CNGA1-201ENST00000358519 MRC2Q9UBG0 1479 aa6.46□□□□□ -1.38
CNGA1-201ENST00000358519 KIF21AQ7Z4S6 1674 aa6.46□□□□□ -1.38
CNGA1-201ENST00000358519 BAZ1BQ9UIG0 1483 aaKnown RBP6.45□□□□□ -1.38
CNGA1-201ENST00000358519 PDCD7Q8N8D1 485 aaKnown RBP6.45□□□□□ -1.38
CNGA1-201ENST00000358519 NUBP1P53384 320 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms