RNA–Protein interactions for RNA: ENST00000357632.6

CCR9-202, Transcript of C-C motif chemokine receptor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR9, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-202ENST00000357632 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
CCR9-202ENST00000357632 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
CCR9-202ENST00000357632 APLP2Q06481 763 aa16.14■□□□□ 0.17
CCR9-202ENST00000357632 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
CCR9-202ENST00000357632 SAMD9Q5K651 1589 aa16.11■□□□□ 0.17
CCR9-202ENST00000357632 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
CCR9-202ENST00000357632 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
CCR9-202ENST00000357632 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
CCR9-202ENST00000357632 GRIN2AQ12879 1464 aa16.08■□□□□ 0.16
CCR9-202ENST00000357632 RANGAP1P46060 587 aaPredicted RBP16.06■□□□□ 0.16
CCR9-202ENST00000357632 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
CCR9-202ENST00000357632 KIAA0586Q9BVV6 1533 aa16.05■□□□□ 0.16
CCR9-202ENST00000357632 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
CCR9-202ENST00000357632 FYCO1Q9BQS8 1478 aa16.02■□□□□ 0.16
CCR9-202ENST00000357632 CASKIN1Q8WXD9 1431 aa16■□□□□ 0.15
CCR9-202ENST00000357632 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
CCR9-202ENST00000357632 TIAM1Q13009 1591 aa15.98■□□□□ 0.15
CCR9-202ENST00000357632 CHMP7Q8WUX9 453 aaPredicted RBP15.98■□□□□ 0.15
CCR9-202ENST00000357632 NUP160Q12769 1436 aa15.98■□□□□ 0.15
CCR9-202ENST00000357632 FHOD3Q2V2M9 1422 aa15.97■□□□□ 0.15
CCR9-202ENST00000357632 PCF11O94913 1555 aaKnown RBP15.97■□□□□ 0.15
CCR9-202ENST00000357632 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
CCR9-202ENST00000357632 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
CCR9-202ENST00000357632 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
CCR9-202ENST00000357632 HECW1Q76N89 1606 aa15.89■□□□□ 0.13
CCR9-202ENST00000357632 CCDC18Q5T9S5 1454 aa15.89■□□□□ 0.13
CCR9-202ENST00000357632 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
CCR9-202ENST00000357632 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
CCR9-202ENST00000357632 CARMIL2Q6F5E8 1435 aa15.87■□□□□ 0.13
CCR9-202ENST00000357632 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
CCR9-202ENST00000357632 CHD1O14646 1710 aa15.87■□□□□ 0.13
CCR9-202ENST00000357632 RRBP1Q9P2E9 1410 aaKnown RBP15.83■□□□□ 0.13
CCR9-202ENST00000357632 HRCP23327 699 aa15.83■□□□□ 0.12
CCR9-202ENST00000357632 KANK4Q5T7N3 995 aaPredicted RBP15.83■□□□□ 0.12
CCR9-202ENST00000357632 FBLN2P98095 1184 aa15.82■□□□□ 0.12
CCR9-202ENST00000357632 EHBP1L1Q8N3D4 1523 aa15.8■□□□□ 0.12
CCR9-202ENST00000357632 LRRIQ1Q96JM4 1722 aa15.8■□□□□ 0.12
CCR9-202ENST00000357632 ZEB1P37275 1124 aaPredicted RBP15.8■□□□□ 0.12
CCR9-202ENST00000357632 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
CCR9-202ENST00000357632 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
CCR9-202ENST00000357632 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
CCR9-202ENST00000357632 RAPGEF6Q8TEU7 1601 aa15.78■□□□□ 0.12
CCR9-202ENST00000357632 SUPT6HQ7KZ85 1726 aaKnown RBP15.76■□□□□ 0.11
CCR9-202ENST00000357632 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
CCR9-202ENST00000357632 ATP1B4Q9UN42 357 aaPredicted RBP15.75■□□□□ 0.11
CCR9-202ENST00000357632 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.74■□□□□ 0.11
CCR9-202ENST00000357632 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
CCR9-202ENST00000357632 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
CCR9-202ENST00000357632 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.1
CCR9-202ENST00000357632 PRG4Q92954 1404 aaPredicted RBP15.69■□□□□ 0.1
CCR9-202ENST00000357632 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
CCR9-202ENST00000357632 ABCA8O94911 1581 aa15.68■□□□□ 0.1
CCR9-202ENST00000357632 NUP153P49790 1475 aaKnown RBP15.68■□□□□ 0.1
CCR9-202ENST00000357632 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
CCR9-202ENST00000357632 PHLDB1Q86UU1 1377 aa15.67■□□□□ 0.1
CCR9-202ENST00000357632 NCOA2Q15596 1464 aa15.66■□□□□ 0.1
CCR9-202ENST00000357632 MYOM3Q5VTT5 1437 aa15.63■□□□□ 0.09
CCR9-202ENST00000357632 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
CCR9-202ENST00000357632 PTPRGP23470 1445 aa15.63■□□□□ 0.09
CCR9-202ENST00000357632 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
CCR9-202ENST00000357632 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
CCR9-202ENST00000357632 ADCY10Q96PN6 1610 aa15.62■□□□□ 0.09
CCR9-202ENST00000357632 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
CCR9-202ENST00000357632 PLB1Q6P1J6 1458 aa15.61■□□□□ 0.09
CCR9-202ENST00000357632 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
CCR9-202ENST00000357632 TROQ12816 1431 aaPredicted RBP15.59■□□□□ 0.09
CCR9-202ENST00000357632 TCOF1Q13428 1488 aaKnown RBP15.58■□□□□ 0.08
CCR9-202ENST00000357632 CCER1Q8TC90 406 aaPredicted RBP15.57■□□□□ 0.08
CCR9-202ENST00000357632 UACAQ9BZF9 1416 aa15.56■□□□□ 0.08
CCR9-202ENST00000357632 ITSN2Q9NZM3 1697 aa15.56■□□□□ 0.08
CCR9-202ENST00000357632 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
CCR9-202ENST00000357632 UHRF1BP1LA0JNW5 1464 aa15.55■□□□□ 0.08
CCR9-202ENST00000357632 CLSPNQ9HAW4 1339 aa15.54■□□□□ 0.08
CCR9-202ENST00000357632 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
CCR9-202ENST00000357632 ATP10BO94823 1461 aa15.53■□□□□ 0.08
CCR9-202ENST00000357632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
CCR9-202ENST00000357632 FAM50AQ14320 339 aaKnown RBP15.51■□□□□ 0.07
CCR9-202ENST00000357632 KIF14Q15058 1648 aa15.51■□□□□ 0.07
CCR9-202ENST00000357632 PLEKHD1A6NEE1 506 aa15.51■□□□□ 0.07
CCR9-202ENST00000357632 ACIN1Q9UKV3 1341 aaKnown RBP15.49■□□□□ 0.07
CCR9-202ENST00000357632 SETD5Q9C0A6 1442 aa15.48■□□□□ 0.07
CCR9-202ENST00000357632 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
CCR9-202ENST00000357632 OSCARQ8IYS5 282 aa15.48■□□□□ 0.07
CCR9-202ENST00000357632 AKNAQ7Z591 1439 aa15.46■□□□□ 0.07
CCR9-202ENST00000357632 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
CCR9-202ENST00000357632 ABCC10Q5T3U5 1492 aa15.43■□□□□ 0.06
CCR9-202ENST00000357632 HFM1A2PYH4 1435 aa15.42■□□□□ 0.06
CCR9-202ENST00000357632 GPATCH8Q9UKJ3 1502 aaKnown RBP15.42■□□□□ 0.06
CCR9-202ENST00000357632 DNMT1P26358 1616 aaKnown RBP15.42■□□□□ 0.06
CCR9-202ENST00000357632 CDC42BPAQ5VT25 1732 aa15.41■□□□□ 0.06
CCR9-202ENST00000357632 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
CCR9-202ENST00000357632 ITGAEP38570 1179 aa15.41■□□□□ 0.06
CCR9-202ENST00000357632 RAB3GAP2Q9H2M9 1393 aa15.41■□□□□ 0.06
CCR9-202ENST00000357632 GCC2Q8IWJ2 1684 aa15.4■□□□□ 0.06
CCR9-202ENST00000357632 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
CCR9-202ENST00000357632 DHX57Q6P158 1386 aaKnown RBP15.4■□□□□ 0.06
CCR9-202ENST00000357632 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
CCR9-202ENST00000357632 PREX2Q70Z35 1606 aa15.37■□□□□ 0.05
CCR9-202ENST00000357632 CAMSAP2Q08AD1 1489 aa15.37■□□□□ 0.05
CCR9-202ENST00000357632 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms