RNA–Protein interactions for RNA: ENST00000355997.7

SEMA6D-203, Transcript of semaphorin 6D, humanhuman

TSL 5 BASIC

Gene SEMA6D, Length 5,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-203ENST00000355997 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
SEMA6D-203ENST00000355997 RTN4Q9NQC3 1192 aaKnown RBP13.47□□□□□ -0.25
SEMA6D-203ENST00000355997 RRP7BPQ9NSQ0 103 aa13.45□□□□□ -0.26
SEMA6D-203ENST00000355997 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
SEMA6D-203ENST00000355997 EEA1Q15075 1411 aa13.42□□□□□ -0.26
SEMA6D-203ENST00000355997 EIF4G2P78344 907 aaKnown RBP eCLIP13.42□□□□□ -0.26
SEMA6D-203ENST00000355997 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.41□□□□□ -0.26
SEMA6D-203ENST00000355997 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
SEMA6D-203ENST00000355997 TNIKQ9UKE5 1360 aa13.4□□□□□ -0.26
SEMA6D-203ENST00000355997 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
SEMA6D-203ENST00000355997 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
SEMA6D-203ENST00000355997 DNTTIP2Q5QJE6 756 aaKnown RBP13.39□□□□□ -0.27
SEMA6D-203ENST00000355997 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SEMA6D-203ENST00000355997 SUPT16HQ9Y5B9 1047 aaKnown RBP13.37□□□□□ -0.27
SEMA6D-203ENST00000355997 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
SEMA6D-203ENST00000355997 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
SEMA6D-203ENST00000355997 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
SEMA6D-203ENST00000355997 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
SEMA6D-203ENST00000355997 NCLP19338 710 aaKnown RBP13.34□□□□□ -0.27
SEMA6D-203ENST00000355997 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
SEMA6D-203ENST00000355997 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
SEMA6D-203ENST00000355997 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
SEMA6D-203ENST00000355997 BECN1Q14457 450 aa13.32□□□□□ -0.28
SEMA6D-203ENST00000355997 PLPPR3Q6T4P5 718 aa13.29□□□□□ -0.28
SEMA6D-203ENST00000355997 BAZ1BQ9UIG0 1483 aaKnown RBP13.28□□□□□ -0.28
SEMA6D-203ENST00000355997 GOLGA6L22H0YM25 854 aa13.28□□□□□ -0.28
SEMA6D-203ENST00000355997 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
SEMA6D-203ENST00000355997 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
SEMA6D-203ENST00000355997 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
SEMA6D-203ENST00000355997 NACADO15069 1562 aa13.25□□□□□ -0.29
SEMA6D-203ENST00000355997 SOGA1O94964 1423 aa13.25□□□□□ -0.29
SEMA6D-203ENST00000355997 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
SEMA6D-203ENST00000355997 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
SEMA6D-203ENST00000355997 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
SEMA6D-203ENST00000355997 PPP4R2Q9NY27 417 aa13.22□□□□□ -0.29
SEMA6D-203ENST00000355997 PPM1GO15355 546 aaPredicted RBP13.21□□□□□ -0.3
SEMA6D-203ENST00000355997 CARD11Q9BXL7 1154 aa13.2□□□□□ -0.3
SEMA6D-203ENST00000355997 LAS1LQ9Y4W2 734 aaKnown RBP13.2□□□□□ -0.3
SEMA6D-203ENST00000355997 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
SEMA6D-203ENST00000355997 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
SEMA6D-203ENST00000355997 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
SEMA6D-203ENST00000355997 ABCC8Q09428 1581 aa13.19□□□□□ -0.3
SEMA6D-203ENST00000355997 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
SEMA6D-203ENST00000355997 BAZ1AQ9NRL2 1556 aaPredicted RBP13.19□□□□□ -0.3
SEMA6D-203ENST00000355997 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
SEMA6D-203ENST00000355997 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
SEMA6D-203ENST00000355997 KCNH8Q96L42 1107 aa13.17□□□□□ -0.3
SEMA6D-203ENST00000355997 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
SEMA6D-203ENST00000355997 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 CFDP1Q9UEE9 299 aaPredicted RBP13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 GOLGA6L6A8MZA4 724 aa13.15□□□□□ -0.3
SEMA6D-203ENST00000355997 PLEKHD1A6NEE1 506 aa13.14□□□□□ -0.31
SEMA6D-203ENST00000355997 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
SEMA6D-203ENST00000355997 CHAF1AQ13111 956 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-203ENST00000355997 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
SEMA6D-203ENST00000355997 RGS3P49796 1198 aa13.11□□□□□ -0.31
SEMA6D-203ENST00000355997 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
SEMA6D-203ENST00000355997 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
SEMA6D-203ENST00000355997 SETD5Q9C0A6 1442 aa13.1□□□□□ -0.31
SEMA6D-203ENST00000355997 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
SEMA6D-203ENST00000355997 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
SEMA6D-203ENST00000355997 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 MROH2BQ7Z745 1585 aa13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 RBM19Q9Y4C8 960 aaKnown RBP13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 CCDC88BA6NC98 1476 aa13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 ZBTB7CA1YPR0 619 aa13.09□□□□□ -0.31
SEMA6D-203ENST00000355997 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.31
SEMA6D-203ENST00000355997 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
SEMA6D-203ENST00000355997 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
SEMA6D-203ENST00000355997 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
SEMA6D-203ENST00000355997 ARID3AQ99856 593 aa13.07□□□□□ -0.32
SEMA6D-203ENST00000355997 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
SEMA6D-203ENST00000355997 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
SEMA6D-203ENST00000355997 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
SEMA6D-203ENST00000355997 FRAT1Q92837 279 aaPredicted RBP13.06□□□□□ -0.32
SEMA6D-203ENST00000355997 CUX2O14529 1486 aa13.06□□□□□ -0.32
SEMA6D-203ENST00000355997 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
SEMA6D-203ENST00000355997 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
SEMA6D-203ENST00000355997 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
SEMA6D-203ENST00000355997 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
SEMA6D-203ENST00000355997 CASC1Q6TDU7 716 aa13.04□□□□□ -0.32
SEMA6D-203ENST00000355997 PPP1R15AO75807 674 aaPredicted RBP13.03□□□□□ -0.32
SEMA6D-203ENST00000355997 WIZO95785 1651 aa13.02□□□□□ -0.32
SEMA6D-203ENST00000355997 RAB3GAP2Q9H2M9 1393 aa13.02□□□□□ -0.32
SEMA6D-203ENST00000355997 FOXD1Q16676 465 aa13.02□□□□□ -0.33
SEMA6D-203ENST00000355997 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
SEMA6D-203ENST00000355997 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
SEMA6D-203ENST00000355997 MAPK8IP3Q9UPT6 1336 aa13□□□□□ -0.33
SEMA6D-203ENST00000355997 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
SEMA6D-203ENST00000355997 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
SEMA6D-203ENST00000355997 HSP90AB1P08238 724 aaKnown RBP12.98□□□□□ -0.33
SEMA6D-203ENST00000355997 NRDCO43847 1150 aa12.97□□□□□ -0.33
SEMA6D-203ENST00000355997 CALRP27797 417 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-203ENST00000355997 TMF1P82094 1093 aa12.97□□□□□ -0.33
SEMA6D-203ENST00000355997 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
SEMA6D-203ENST00000355997 SPRYD3Q8NCJ5 442 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms