RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 ARID3CA6NKF2 412 aa10.47□□□□□ -0.73
VANGL1-202ENST00000355485 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
VANGL1-202ENST00000355485 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
VANGL1-202ENST00000355485 ERICH6BQ5W0A0 696 aa10.46□□□□□ -0.73
VANGL1-202ENST00000355485 TNNT2P45379 298 aaPredicted RBP10.45□□□□□ -0.74
VANGL1-202ENST00000355485 PPM1GO15355 546 aaPredicted RBP10.44□□□□□ -0.74
VANGL1-202ENST00000355485 TONSLQ96HA7 1378 aa10.43□□□□□ -0.74
VANGL1-202ENST00000355485 TMC1Q8TDI8 760 aa10.43□□□□□ -0.74
VANGL1-202ENST00000355485 DNTTIP2Q5QJE6 756 aaKnown RBP10.42□□□□□ -0.74
VANGL1-202ENST00000355485 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
VANGL1-202ENST00000355485 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
VANGL1-202ENST00000355485 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
VANGL1-202ENST00000355485 PTMAP06454 111 aaKnown RBP10.39□□□□□ -0.75
VANGL1-202ENST00000355485 BECN1Q14457 450 aa10.37□□□□□ -0.75
VANGL1-202ENST00000355485 PRKCSHP14314 528 aaPredicted RBP10.37□□□□□ -0.75
VANGL1-202ENST00000355485 TIMELESSQ9UNS1 1208 aa10.37□□□□□ -0.75
VANGL1-202ENST00000355485 ANO8Q9HCE9 1232 aaPredicted RBP10.36□□□□□ -0.75
VANGL1-202ENST00000355485 VSIG10Q8N0Z9 540 aa10.36□□□□□ -0.75
VANGL1-202ENST00000355485 HAP1P54257 671 aaPredicted RBP10.36□□□□□ -0.75
VANGL1-202ENST00000355485 NPHP1O15259 732 aa10.35□□□□□ -0.75
VANGL1-202ENST00000355485 NPM1P06748 294 aaKnown RBP eCLIP10.35□□□□□ -0.75
VANGL1-202ENST00000355485 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.35□□□□□ -0.75
VANGL1-202ENST00000355485 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
VANGL1-202ENST00000355485 RGS3P49796 1198 aa10.34□□□□□ -0.75
VANGL1-202ENST00000355485 CCDC180Q9P1Z9 1646 aa10.34□□□□□ -0.75
VANGL1-202ENST00000355485 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
VANGL1-202ENST00000355485 ZCCHC6Q5VYS8 1495 aaKnown RBP10.33□□□□□ -0.76
VANGL1-202ENST00000355485 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
VANGL1-202ENST00000355485 FBLN2P98095 1184 aa10.31□□□□□ -0.76
VANGL1-202ENST00000355485 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
VANGL1-202ENST00000355485 ZNF777Q9ULD5 760 aaPredicted RBP10.31□□□□□ -0.76
VANGL1-202ENST00000355485 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
VANGL1-202ENST00000355485 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
VANGL1-202ENST00000355485 GZF1Q9H116 711 aaPredicted RBP10.29□□□□□ -0.76
VANGL1-202ENST00000355485 KDM2AQ9Y2K7 1162 aa10.29□□□□□ -0.76
VANGL1-202ENST00000355485 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
VANGL1-202ENST00000355485 C14orf37Q86TY3 774 aa10.27□□□□□ -0.77
VANGL1-202ENST00000355485 SIN3AQ96ST3 1273 aa10.25□□□□□ -0.77
VANGL1-202ENST00000355485 GOLGA6L22H0YM25 854 aa10.25□□□□□ -0.77
VANGL1-202ENST00000355485 L1TD1Q5T7N2 865 aaKnown RBP10.24□□□□□ -0.77
VANGL1-202ENST00000355485 A0A0U1RQG5 324 aaPredicted RBP10.24□□□□□ -0.77
VANGL1-202ENST00000355485 MSNP26038 577 aaKnown RBP10.24□□□□□ -0.77
VANGL1-202ENST00000355485 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
VANGL1-202ENST00000355485 ZRSR1Q15695 479 aaKnown RBP10.23□□□□□ -0.77
VANGL1-202ENST00000355485 CLSTN1O94985 981 aa10.23□□□□□ -0.77
VANGL1-202ENST00000355485 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
VANGL1-202ENST00000355485 EEA1Q15075 1411 aa10.22□□□□□ -0.77
VANGL1-202ENST00000355485 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
VANGL1-202ENST00000355485 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
VANGL1-202ENST00000355485 PNNQ9H307 717 aaKnown RBP10.21□□□□□ -0.77
VANGL1-202ENST00000355485 HSP90AB1P08238 724 aaKnown RBP10.21□□□□□ -0.77
VANGL1-202ENST00000355485 SLC4A3P48751 1232 aa10.21□□□□□ -0.78
VANGL1-202ENST00000355485 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
VANGL1-202ENST00000355485 MYH16Q9H6N6 1097 aa10.2□□□□□ -0.78
VANGL1-202ENST00000355485 IPO9Q96P70 1041 aaKnown RBP10.2□□□□□ -0.78
VANGL1-202ENST00000355485 SLKQ9H2G2 1235 aaPredicted RBP10.19□□□□□ -0.78
VANGL1-202ENST00000355485 SENP3Q9H4L4 574 aaPredicted RBP10.18□□□□□ -0.78
VANGL1-202ENST00000355485 TMX4Q9H1E5 349 aaPredicted RBP10.17□□□□□ -0.78
VANGL1-202ENST00000355485 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
VANGL1-202ENST00000355485 PKNOX2Q96KN3 472 aa10.17□□□□□ -0.78
VANGL1-202ENST00000355485 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
VANGL1-202ENST00000355485 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
VANGL1-202ENST00000355485 FRAT1Q92837 279 aaPredicted RBP10.15□□□□□ -0.78
VANGL1-202ENST00000355485 RRP7BPQ9NSQ0 103 aa10.15□□□□□ -0.78
VANGL1-202ENST00000355485 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
VANGL1-202ENST00000355485 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
VANGL1-202ENST00000355485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
VANGL1-202ENST00000355485 GOLGA6L3A6NEY3 463 aa10.13□□□□□ -0.79
VANGL1-202ENST00000355485 FOXD4L1Q9NU39 408 aa10.11□□□□□ -0.79
VANGL1-202ENST00000355485 CC2D1BQ5T0F9 858 aaKnown RBP10.11□□□□□ -0.79
VANGL1-202ENST00000355485 HSCBQ8IWL3 235 aa10.11□□□□□ -0.79
VANGL1-202ENST00000355485 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
VANGL1-202ENST00000355485 PODXL2Q9NZ53 605 aa10.1□□□□□ -0.79
VANGL1-202ENST00000355485 TNNT3P45378 269 aaPredicted RBP10.09□□□□□ -0.79
VANGL1-202ENST00000355485 GSE1Q14687 1217 aa10.08□□□□□ -0.8
VANGL1-202ENST00000355485 DRC7Q8IY82 874 aa10.08□□□□□ -0.8
VANGL1-202ENST00000355485 CEP162Q5TB80 1403 aa10.08□□□□□ -0.8
VANGL1-202ENST00000355485 CHAF1AQ13111 956 aaPredicted RBP10.07□□□□□ -0.8
VANGL1-202ENST00000355485 GOLGA6L6A8MZA4 724 aa10.07□□□□□ -0.8
VANGL1-202ENST00000355485 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
VANGL1-202ENST00000355485 FTSJ3Q8IY81 847 aaKnown RBP10.07□□□□□ -0.8
VANGL1-202ENST00000355485 CCER2I3L3R5 266 aa10.05□□□□□ -0.8
VANGL1-202ENST00000355485 BRPF3Q9ULD4 1205 aa10.05□□□□□ -0.8
VANGL1-202ENST00000355485 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
VANGL1-202ENST00000355485 TCERG1O14776 1098 aaKnown RBP10.03□□□□□ -0.8
VANGL1-202ENST00000355485 KIAA2012Q0VF49 1180 aa10.03□□□□□ -0.8
VANGL1-202ENST00000355485 FANCIQ9NVI1 1328 aa10.03□□□□□ -0.8
VANGL1-202ENST00000355485 HSPA5P11021 654 aaKnown RBP10.02□□□□□ -0.81
VANGL1-202ENST00000355485 CASC1Q6TDU7 716 aa10.02□□□□□ -0.81
VANGL1-202ENST00000355485 CLIP1P30622 1438 aa10.01□□□□□ -0.81
VANGL1-202ENST00000355485 NRDCO43847 1150 aa10.01□□□□□ -0.81
VANGL1-202ENST00000355485 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
VANGL1-202ENST00000355485 FOXD1Q16676 465 aa10.01□□□□□ -0.81
VANGL1-202ENST00000355485 FAM13BQ9NYF5 915 aa10.01□□□□□ -0.81
VANGL1-202ENST00000355485 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
VANGL1-202ENST00000355485 FOXD4L5Q5VV16 416 aaPredicted RBP10□□□□□ -0.81
VANGL1-202ENST00000355485 FOXD4L4Q8WXT5 416 aaPredicted RBP10□□□□□ -0.81
VANGL1-202ENST00000355485 PLEKHG5O94827 1062 aa9.99□□□□□ -0.81
VANGL1-202ENST00000355485 CNKSR2Q8WXI2 1034 aa9.99□□□□□ -0.81
VANGL1-202ENST00000355485 ZNF771Q7L3S4 317 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms