RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 IRX6P78412 446 aaPredicted RBP23.79■■□□□ 1.4
CRKL-201ENST00000354336 RRP7BPQ9NSQ0 103 aa23.74■■□□□ 1.39
CRKL-201ENST00000354336 RSF1Q96T23 1441 aaPredicted RBP23.72■■□□□ 1.39
CRKL-201ENST00000354336 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
CRKL-201ENST00000354336 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
CRKL-201ENST00000354336 MYH16Q9H6N6 1097 aa23.63■■□□□ 1.37
CRKL-201ENST00000354336 TNIKQ9UKE5 1360 aa23.61■■□□□ 1.37
CRKL-201ENST00000354336 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.374e-6■■■□□ 16.1
CRKL-201ENST00000354336 GLIPR1L2Q4G1C9 344 aa23.6■■□□□ 1.37
CRKL-201ENST00000354336 ARXQ96QS3 562 aa23.6■■□□□ 1.37
CRKL-201ENST00000354336 DDRGK1Q96HY6 314 aa23.59■■□□□ 1.37
CRKL-201ENST00000354336 RB1CC1Q8TDY2 1594 aa23.55■■□□□ 1.36
CRKL-201ENST00000354336 PLEKHD1A6NEE1 506 aa23.54■■□□□ 1.36
CRKL-201ENST00000354336 BECN1Q14457 450 aa23.54■■□□□ 1.36
CRKL-201ENST00000354336 CEP164Q9UPV0 1460 aa23.54■■□□□ 1.36
CRKL-201ENST00000354336 KIF27Q86VH2 1401 aa23.5■■□□□ 1.35
CRKL-201ENST00000354336 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
CRKL-201ENST00000354336 CDCA8Q53HL2 280 aa23.47■■□□□ 1.35
CRKL-201ENST00000354336 SUPT16HQ9Y5B9 1047 aaKnown RBP23.46■■□□□ 1.35
CRKL-201ENST00000354336 KCNH8Q96L42 1107 aa23.44■■□□□ 1.34
CRKL-201ENST00000354336 CFDP1Q9UEE9 299 aaPredicted RBP23.44■■□□□ 1.34
CRKL-201ENST00000354336 CFAP53Q96M91 514 aa23.44■■□□□ 1.34
CRKL-201ENST00000354336 KNSTRNQ9Y448 316 aa23.44■■□□□ 1.34
CRKL-201ENST00000354336 ANP32EQ9BTT0 268 aa23.43■■□□□ 1.34
CRKL-201ENST00000354336 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
CRKL-201ENST00000354336 BAZ1BQ9UIG0 1483 aaKnown RBP23.42■■□□□ 1.34
CRKL-201ENST00000354336 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.33
CRKL-201ENST00000354336 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
CRKL-201ENST00000354336 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
CRKL-201ENST00000354336 PPP4R2Q9NY27 417 aa23.35■■□□□ 1.33
CRKL-201ENST00000354336 NCLP19338 710 aaKnown RBP23.35■■□□□ 1.33
CRKL-201ENST00000354336 SENP3-EIF4A1A0A087X0R7 540 aa23.34■■□□□ 1.33
CRKL-201ENST00000354336 NACADO15069 1562 aa23.33■■□□□ 1.32
CRKL-201ENST00000354336 TRIM44Q96DX7 344 aaPredicted RBP23.32■■□□□ 1.32
CRKL-201ENST00000354336 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
CRKL-201ENST00000354336 PPM1GO15355 546 aaPredicted RBP23.31■■□□□ 1.32
CRKL-201ENST00000354336 FTSJ3Q8IY81 847 aaKnown RBP23.29■■□□□ 1.32
CRKL-201ENST00000354336 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.32
CRKL-201ENST00000354336 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
CRKL-201ENST00000354336 ZBTB7CA1YPR0 619 aa23.26■■□□□ 1.31
CRKL-201ENST00000354336 CASC1Q6TDU7 716 aa23.23■■□□□ 1.31
CRKL-201ENST00000354336 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
CRKL-201ENST00000354336 TIMELESSQ9UNS1 1208 aa23.22■■□□□ 1.31
CRKL-201ENST00000354336 MAPK8IP3Q9UPT6 1336 aa23.22■■□□□ 1.31
CRKL-201ENST00000354336 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
CRKL-201ENST00000354336 NUDCQ9Y266 331 aa23.2■■□□□ 1.31
CRKL-201ENST00000354336 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
CRKL-201ENST00000354336 RGS3P49796 1198 aa23.16■■□□□ 1.3
CRKL-201ENST00000354336 NOP58Q9Y2X3 529 aaKnown RBP23.16■■□□□ 1.3
CRKL-201ENST00000354336 A0A0G2JS52 829 aa23.15■■□□□ 1.3
CRKL-201ENST00000354336 PLEKHG5O94827 1062 aa23.15■■□□□ 1.3
CRKL-201ENST00000354336 CC2D1BQ5T0F9 858 aaKnown RBP23.14■■□□□ 1.29
CRKL-201ENST00000354336 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
CRKL-201ENST00000354336 FRAT1Q92837 279 aaPredicted RBP23.13■■□□□ 1.29
CRKL-201ENST00000354336 LAS1LQ9Y4W2 734 aaKnown RBP23.12■■□□□ 1.29
CRKL-201ENST00000354336 CHMP4BQ9H444 224 aaKnown RBP23.11■■□□□ 1.29
CRKL-201ENST00000354336 MS4A1P11836 297 aa23.11■■□□□ 1.29
CRKL-201ENST00000354336 CDK11BP21127 795 aaKnown RBP23.11■■□□□ 1.29
CRKL-201ENST00000354336 PTMAP06454 111 aaKnown RBP23.1■■□□□ 1.29
CRKL-201ENST00000354336 B4GALNT3Q6L9W6 998 aa23.1■■□□□ 1.29
CRKL-201ENST00000354336 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
CRKL-201ENST00000354336 SOGA1O94964 1423 aa23.09■■□□□ 1.29
CRKL-201ENST00000354336 TMF1P82094 1093 aa23.09■■□□□ 1.29
CRKL-201ENST00000354336 POGKQ9P215 609 aa23.09■■□□□ 1.29
CRKL-201ENST00000354336 CARMIL1Q5VZK9 1371 aa23.08■■□□□ 1.29
CRKL-201ENST00000354336 SETD5Q9C0A6 1442 aa23.06■■□□□ 1.28
CRKL-201ENST00000354336 ZRSR1Q15695 479 aaKnown RBP23.06■■□□□ 1.28
CRKL-201ENST00000354336 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
CRKL-201ENST00000354336 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
CRKL-201ENST00000354336 VPS8Q8N3P4 1428 aa23.04■■□□□ 1.28
CRKL-201ENST00000354336 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
CRKL-201ENST00000354336 CUX2O14529 1486 aa23.02■■□□□ 1.28
CRKL-201ENST00000354336 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
CRKL-201ENST00000354336 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.28
CRKL-201ENST00000354336 U2SURPO15042 1029 aaKnown RBP23.01■■□□□ 1.27
CRKL-201ENST00000354336 HSPA5P11021 654 aaKnown RBP22.99■■□□□ 1.27
CRKL-201ENST00000354336 ARHGAP35Q9NRY4 1499 aa22.98■■□□□ 1.27
CRKL-201ENST00000354336 HSP90AB1P08238 724 aaKnown RBP22.98■■□□□ 1.27
CRKL-201ENST00000354336 DNTTIP2Q5QJE6 756 aaKnown RBP22.97■■□□□ 1.27
CRKL-201ENST00000354336 EIF4G1Q04637 1599 aaKnown RBP22.96■■□□□ 1.27
CRKL-201ENST00000354336 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
CRKL-201ENST00000354336 KANK1Q14678 1352 aa22.95■■□□□ 1.26
CRKL-201ENST00000354336 TPRNQ4KMQ1 711 aa22.94■■□□□ 1.26
CRKL-201ENST00000354336 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
CRKL-201ENST00000354336 NAP1L5Q96NT1 182 aaPredicted RBP22.9■■□□□ 1.26
CRKL-201ENST00000354336 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
CRKL-201ENST00000354336 HSCBQ8IWL3 235 aa22.89■■□□□ 1.25
CRKL-201ENST00000354336 OS9Q13438 667 aaPredicted RBP22.88■■□□□ 1.25
CRKL-201ENST00000354336 MORC1Q86VD1 984 aa22.88■■□□□ 1.25
CRKL-201ENST00000354336 RBM19Q9Y4C8 960 aaKnown RBP22.88■■□□□ 1.25
CRKL-201ENST00000354336 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
CRKL-201ENST00000354336 RTN4Q9NQC3 1192 aaKnown RBP22.86■■□□□ 1.25
CRKL-201ENST00000354336 PKD2Q13563 968 aa22.86■■□□□ 1.25
CRKL-201ENST00000354336 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
CRKL-201ENST00000354336 PLCB2Q00722 1185 aa22.83■■□□□ 1.25
CRKL-201ENST00000354336 LMOD2Q6P5Q4 547 aa22.83■■□□□ 1.25
CRKL-201ENST00000354336 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
CRKL-201ENST00000354336 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
CRKL-201ENST00000354336 KCNJ4P48050 445 aa22.81■■□□□ 1.24
CRKL-201ENST00000354336 FGD1P98174 961 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 1209.5 ms