RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 CASKIN1Q8WXD9 1431 aa5.53□□□□□ -1.52
RNF38-203ENST00000353739 SAMD9Q5K651 1589 aa5.53□□□□□ -1.52
RNF38-203ENST00000353739 GAPVD1Q14C86 1478 aa5.53□□□□□ -1.52
RNF38-203ENST00000353739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.52□□□□□ -1.53
RNF38-203ENST00000353739 PCF11O94913 1555 aaKnown RBP5.52□□□□□ -1.53
RNF38-203ENST00000353739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNF38-203ENST00000353739 CCDC18Q5T9S5 1454 aa5.52□□□□□ -1.53
RNF38-203ENST00000353739 LRRC9Q6ZRR7 1453 aa5.52□□□□□ -1.53
RNF38-203ENST00000353739 TARBP1Q13395 1621 aaKnown RBP5.52□□□□□ -1.53
RNF38-203ENST00000353739 CCNB3Q8WWL7 1395 aa5.52□□□□□ -1.53
RNF38-203ENST00000353739 RAD54L2Q9Y4B4 1467 aa5.51□□□□□ -1.53
RNF38-203ENST00000353739 NESP48681 1621 aa5.51□□□□□ -1.53
RNF38-203ENST00000353739 IFT140Q96RY7 1462 aa5.51□□□□□ -1.53
RNF38-203ENST00000353739 ACIN1Q9UKV3 1341 aaKnown RBP5.51□□□□□ -1.53
RNF38-203ENST00000353739 WDR62O43379 1518 aa5.5□□□□□ -1.53
RNF38-203ENST00000353739 ADAMTS12P58397 1594 aa5.5□□□□□ -1.53
RNF38-203ENST00000353739 HECW1Q76N89 1606 aa5.5□□□□□ -1.53
RNF38-203ENST00000353739 EHBP1L1Q8N3D4 1523 aa5.5□□□□□ -1.53
RNF38-203ENST00000353739 TTBK1Q5TCY1 1321 aaPredicted RBP5.49□□□□□ -1.53
RNF38-203ENST00000353739 GRIN2BQ13224 1484 aa5.48□□□□□ -1.53
RNF38-203ENST00000353739 SUPT6HQ7KZ85 1726 aaKnown RBP5.48□□□□□ -1.53
RNF38-203ENST00000353739 ZNF316A6NFI3 1004 aaPredicted RBP5.48□□□□□ -1.53
RNF38-203ENST00000353739 IQGAP2Q13576 1575 aa5.48□□□□□ -1.53
RNF38-203ENST00000353739 RANGAP1P46060 587 aaPredicted RBP5.48□□□□□ -1.53
RNF38-203ENST00000353739 HNRNPUL2Q1KMD3 747 aaKnown RBP5.48□□□□□ -1.53
RNF38-203ENST00000353739 SNAPC4Q5SXM2 1469 aa5.47□□□□□ -1.53
RNF38-203ENST00000353739 CENPBP07199 599 aaPredicted RBP5.46□□□□□ -1.53
RNF38-203ENST00000353739 SETD5Q9C0A6 1442 aa5.46□□□□□ -1.54
RNF38-203ENST00000353739 UGGT2Q9NYU1 1516 aa5.46□□□□□ -1.54
RNF38-203ENST00000353739 FHOD3Q2V2M9 1422 aa5.45□□□□□ -1.54
RNF38-203ENST00000353739 DHX57Q6P158 1386 aaKnown RBP5.45□□□□□ -1.54
RNF38-203ENST00000353739 DIEXFQ68CQ4 756 aaKnown RBP5.45□□□□□ -1.54
RNF38-203ENST00000353739 KANK4Q5T7N3 995 aaPredicted RBP5.45□□□□□ -1.54
RNF38-203ENST00000353739 TIMELESSQ9UNS1 1208 aa5.44□□□□□ -1.54
RNF38-203ENST00000353739 MAGI1Q96QZ7 1491 aaPredicted RBP5.44□□□□□ -1.54
RNF38-203ENST00000353739 DNAJC5BQ9UF47 199 aa5.43□□□□□ -1.54
RNF38-203ENST00000353739 MTUS2Q5JR59 1369 aa5.43□□□□□ -1.54
RNF38-203ENST00000353739 FGD6Q6ZV73 1430 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 TDRD9Q8NDG6 1382 aaKnown RBP5.42□□□□□ -1.54
RNF38-203ENST00000353739 ERCC6Q03468 1493 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 TCOF1Q13428 1488 aaKnown RBP5.42□□□□□ -1.54
RNF38-203ENST00000353739 KIAA0586Q9BVV6 1533 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 EIF4G3O43432 1585 aaKnown RBP5.42□□□□□ -1.54
RNF38-203ENST00000353739 MYOM3Q5VTT5 1437 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 ARHGEF11O15085 1522 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 KIAA0556O60303 1618 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 AKNAQ7Z591 1439 aa5.42□□□□□ -1.54
RNF38-203ENST00000353739 PHLDB1Q86UU1 1377 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 GCC2Q8IWJ2 1684 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 MIA2Q96PC5 1412 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 PTPN23Q9H3S7 1636 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 NCOA2Q15596 1464 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 RAB3GAP2Q9H2M9 1393 aa5.41□□□□□ -1.54
RNF38-203ENST00000353739 ITSN2Q9NZM3 1697 aa5.4□□□□□ -1.54
RNF38-203ENST00000353739 LRRIQ1Q96JM4 1722 aa5.4□□□□□ -1.55
RNF38-203ENST00000353739 GRIN2AQ12879 1464 aa5.4□□□□□ -1.55
RNF38-203ENST00000353739 RAPGEF6Q8TEU7 1601 aa5.4□□□□□ -1.55
RNF38-203ENST00000353739 SYNJ2O15056 1496 aa5.4□□□□□ -1.55
RNF38-203ENST00000353739 HFM1A2PYH4 1435 aa5.39□□□□□ -1.55
RNF38-203ENST00000353739 FAM50AQ14320 339 aaKnown RBP5.39□□□□□ -1.55
RNF38-203ENST00000353739 EPRSP07814 1512 aaKnown RBP5.39□□□□□ -1.55
RNF38-203ENST00000353739 ATP1B4Q9UN42 357 aaPredicted RBP5.39□□□□□ -1.55
RNF38-203ENST00000353739 CARMIL2Q6F5E8 1435 aa5.39□□□□□ -1.55
RNF38-203ENST00000353739 ADCY10Q96PN6 1610 aa5.38□□□□□ -1.55
RNF38-203ENST00000353739 CDK11AQ9UQ88 783 aaPredicted RBP5.38□□□□□ -1.55
RNF38-203ENST00000353739 MAPKBP1O60336 1514 aa5.38□□□□□ -1.55
RNF38-203ENST00000353739 UACAQ9BZF9 1416 aa5.37□□□□□ -1.55
RNF38-203ENST00000353739 P3H3Q8IVL6 736 aa5.37□□□□□ -1.55
RNF38-203ENST00000353739 SLC24A1O60721 1099 aa5.36□□□□□ -1.55
RNF38-203ENST00000353739 MYT1Q01538 1121 aa5.36□□□□□ -1.55
RNF38-203ENST00000353739 PELP1Q8IZL8 1130 aaKnown RBP5.36□□□□□ -1.55
RNF38-203ENST00000353739 ADGBQ8N7X0 1667 aa5.36□□□□□ -1.55
RNF38-203ENST00000353739 ROCK1Q13464 1354 aa5.36□□□□□ -1.55
RNF38-203ENST00000353739 DNMT1P26358 1616 aaKnown RBP5.35□□□□□ -1.55
RNF38-203ENST00000353739 NUP160Q12769 1436 aa5.35□□□□□ -1.55
RNF38-203ENST00000353739 DISP1Q96F81 1524 aa5.35□□□□□ -1.55
RNF38-203ENST00000353739 CEP170Q5SW79 1584 aa5.35□□□□□ -1.55
RNF38-203ENST00000353739 ITGAEP38570 1179 aa5.34□□□□□ -1.55
RNF38-203ENST00000353739 ZNF608Q9ULD9 1512 aaPredicted RBP5.34□□□□□ -1.55
RNF38-203ENST00000353739 KIF14Q15058 1648 aa5.34□□□□□ -1.56
RNF38-203ENST00000353739 CROCC2H7BZ55 1655 aa5.33□□□□□ -1.56
RNF38-203ENST00000353739 MAGI3Q5TCQ9 1506 aa5.33□□□□□ -1.56
RNF38-203ENST00000353739 TONSLQ96HA7 1378 aa5.33□□□□□ -1.56
RNF38-203ENST00000353739 TROQ12816 1431 aaPredicted RBP5.33□□□□□ -1.56
RNF38-203ENST00000353739 NAIPQ13075 1403 aa5.32□□□□□ -1.56
RNF38-203ENST00000353739 NUP153P49790 1475 aaKnown RBP5.32□□□□□ -1.56
RNF38-203ENST00000353739 CDK13Q14004 1512 aaKnown RBP5.32□□□□□ -1.56
RNF38-203ENST00000353739 CHMP7Q8WUX9 453 aaPredicted RBP5.32□□□□□ -1.56
RNF38-203ENST00000353739 SHANK2Q9UPX8 1470 aa5.32□□□□□ -1.56
RNF38-203ENST00000353739 ABCA8O94911 1581 aa5.31□□□□□ -1.56
RNF38-203ENST00000353739 DAPK1P53355 1430 aa5.31□□□□□ -1.56
RNF38-203ENST00000353739 ADGRL2O95490 1459 aa5.31□□□□□ -1.56
RNF38-203ENST00000353739 CAMSAP2Q08AD1 1489 aa5.29□□□□□ -1.56
RNF38-203ENST00000353739 ARHGEF5Q12774 1597 aa5.29□□□□□ -1.56
RNF38-203ENST00000353739 SHROOM2Q13796 1616 aa5.29□□□□□ -1.56
RNF38-203ENST00000353739 PTPRKQ15262 1439 aa5.28□□□□□ -1.56
RNF38-203ENST00000353739 PLEKHH2Q8IVE3 1493 aa5.27□□□□□ -1.57
RNF38-203ENST00000353739 MIER1Q8N108 512 aa5.27□□□□□ -1.57
RNF38-203ENST00000353739 ANKRD30AQ9BXX3 1397 aa5.27□□□□□ -1.57
RNF38-203ENST00000353739 PPP1R15AO75807 674 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms