RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
CD74-202ENST00000353334 SUPT5HO00267 1087 aaKnown RBP23.15■■□□□ 1.3
CD74-202ENST00000353334 FAM69CQ0P6D2 419 aa23.15■■□□□ 1.3
CD74-202ENST00000353334 DIP2BQ9P265 1576 aa23.13■■□□□ 1.29
CD74-202ENST00000353334 ADCY10Q96PN6 1610 aa23.12■■□□□ 1.29
CD74-202ENST00000353334 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
CD74-202ENST00000353334 KDM6BO15054 1643 aa23.05■■□□□ 1.28
CD74-202ENST00000353334 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
CD74-202ENST00000353334 TSPOAP1O95153 1857 aa23.03■■□□□ 1.28
CD74-202ENST00000353334 KDM4FA0A1W2PPD8 638 aa23.02■■□□□ 1.28
CD74-202ENST00000353334 KIAA0586Q9BVV6 1533 aa22.93■■□□□ 1.26
CD74-202ENST00000353334 CUL7Q14999 1698 aa22.84■■□□□ 1.25
CD74-202ENST00000353334 IGF1RP08069 1367 aa22.83■■□□□ 1.25
CD74-202ENST00000353334 ILDR1Q86SU0 546 aaPredicted RBP22.82■■□□□ 1.24
CD74-202ENST00000353334 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
CD74-202ENST00000353334 PPRC1Q5VV67 1664 aaKnown RBP22.82■■□□□ 1.24
CD74-202ENST00000353334 PTPRGP23470 1445 aa22.81■■□□□ 1.24
CD74-202ENST00000353334 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
CD74-202ENST00000353334 KIF27Q86VH2 1401 aa22.77■■□□□ 1.24
CD74-202ENST00000353334 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
CD74-202ENST00000353334 ADGRL1O94910 1474 aa22.75■■□□□ 1.23
CD74-202ENST00000353334 GLI2P10070 1586 aa22.73■■□□□ 1.23
CD74-202ENST00000353334 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
CD74-202ENST00000353334 PLB1Q6P1J6 1458 aa22.71■■□□□ 1.23
CD74-202ENST00000353334 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
CD74-202ENST00000353334 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
CD74-202ENST00000353334 COL17A1Q9UMD9 1497 aaPredicted RBP22.67■■□□□ 1.22
CD74-202ENST00000353334 CARMIL1Q5VZK9 1371 aa22.67■■□□□ 1.22
CD74-202ENST00000353334 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
CD74-202ENST00000353334 MAP3K4Q9Y6R4 1608 aa22.63■■□□□ 1.21
CD74-202ENST00000353334 HECW2Q9P2P5 1572 aa22.62■■□□□ 1.21
CD74-202ENST00000353334 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
CD74-202ENST00000353334 EPRSP07814 1512 aaKnown RBP22.61■■□□□ 1.21
CD74-202ENST00000353334 DISP1Q96F81 1524 aa22.61■■□□□ 1.21
CD74-202ENST00000353334 ZCCHC11Q5TAX3 1644 aaKnown RBP22.58■■□□□ 1.2
CD74-202ENST00000353334 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
CD74-202ENST00000353334 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
CD74-202ENST00000353334 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
CD74-202ENST00000353334 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
CD74-202ENST00000353334 WDR7Q9Y4E6 1490 aa22.45■■□□□ 1.18
CD74-202ENST00000353334 RAPGEF2Q9Y4G8 1499 aa22.41■■□□□ 1.18
CD74-202ENST00000353334 KIF21BO75037 1637 aa22.36■■□□□ 1.17
CD74-202ENST00000353334 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
CD74-202ENST00000353334 MAGI3Q5TCQ9 1506 aa22.34■■□□□ 1.17
CD74-202ENST00000353334 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
CD74-202ENST00000353334 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
CD74-202ENST00000353334 ABCA8O94911 1581 aa22.31■■□□□ 1.16
CD74-202ENST00000353334 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
CD74-202ENST00000353334 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
CD74-202ENST00000353334 ARAP3Q8WWN8 1544 aa22.19■■□□□ 1.14
CD74-202ENST00000353334 FBXO41Q8TF61 875 aa22.18■■□□□ 1.14
CD74-202ENST00000353334 ARID3CA6NKF2 412 aa22.17■■□□□ 1.14
CD74-202ENST00000353334 ADAMTSL3P82987 1691 aa22.16■■□□□ 1.14
CD74-202ENST00000353334 PTPRMP28827 1452 aa22.14■■□□□ 1.14
CD74-202ENST00000353334 ABCA9Q8IUA7 1624 aa22.11■■□□□ 1.13
CD74-202ENST00000353334 ATP10BO94823 1461 aa22.1■■□□□ 1.13
CD74-202ENST00000353334 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
CD74-202ENST00000353334 MADDQ8WXG6 1647 aa22.06■■□□□ 1.12
CD74-202ENST00000353334 RAPGEF3O95398 923 aa22.06■■□□□ 1.12
CD74-202ENST00000353334 FRMPD1Q5SYB0 1578 aa22.06■■□□□ 1.12
CD74-202ENST00000353334 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
CD74-202ENST00000353334 P3H3Q8IVL6 736 aa22.06■■□□□ 1.12
CD74-202ENST00000353334 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
CD74-202ENST00000353334 LMTK3Q96Q04 1460 aa22.01■■□□□ 1.11
CD74-202ENST00000353334 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
CD74-202ENST00000353334 NEO1Q92859 1461 aa22■■□□□ 1.11
CD74-202ENST00000353334 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
CD74-202ENST00000353334 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
CD74-202ENST00000353334 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
CD74-202ENST00000353334 SAMD9Q5K651 1589 aa21.96■■□□□ 1.11
CD74-202ENST00000353334 ARHGEF40Q8TER5 1519 aa21.95■■□□□ 1.1
CD74-202ENST00000353334 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
CD74-202ENST00000353334 RICTORQ6R327 1708 aa21.91■■□□□ 1.1
CD74-202ENST00000353334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.9■■□□□ 1.1
CD74-202ENST00000353334 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
CD74-202ENST00000353334 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
CD74-202ENST00000353334 HSPA2P54652 639 aa21.89■■□□□ 1.09
CD74-202ENST00000353334 SIGLEC1Q9BZZ2 1709 aa21.87■■□□□ 1.09
CD74-202ENST00000353334 PLPPR3Q6T4P5 718 aa21.86■■□□□ 1.09
CD74-202ENST00000353334 DENND4BO75064 1496 aaPredicted RBP21.86■■□□□ 1.09
CD74-202ENST00000353334 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.09
CD74-202ENST00000353334 AKNAQ7Z591 1439 aa21.82■■□□□ 1.08
CD74-202ENST00000353334 FANCAO15360 1455 aa21.81■■□□□ 1.08
CD74-202ENST00000353334 FHOD3Q2V2M9 1422 aa21.81■■□□□ 1.08
CD74-202ENST00000353334 CFAP74Q9C0B2 1584 aa21.8■■□□□ 1.08
CD74-202ENST00000353334 YEATS2Q9ULM3 1422 aa21.8■■□□□ 1.08
CD74-202ENST00000353334 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
CD74-202ENST00000353334 TTC37Q6PGP7 1564 aa21.79■■□□□ 1.08
CD74-202ENST00000353334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08
CD74-202ENST00000353334 RANGAP1P46060 587 aaPredicted RBP21.79■■□□□ 1.08
CD74-202ENST00000353334 ZFYVE16Q7Z3T8 1539 aa21.78■■□□□ 1.08
CD74-202ENST00000353334 FER1L4A9Z1Z3 1794 aa21.76■■□□□ 1.07
CD74-202ENST00000353334 POGZQ7Z3K3 1410 aa21.76■■□□□ 1.07
CD74-202ENST00000353334 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
CD74-202ENST00000353334 CERKQ8TCT0 537 aa21.74■■□□□ 1.07
CD74-202ENST00000353334 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
CD74-202ENST00000353334 HECW1Q76N89 1606 aa21.73■■□□□ 1.07
CD74-202ENST00000353334 MLECQ14165 292 aa21.72■■□□□ 1.07
CD74-202ENST00000353334 CSRNP3Q8WYN3 585 aa21.72■■□□□ 1.07
CD74-202ENST00000353334 CDK13Q14004 1512 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms