RNA–Protein interactions for RNA: ENST00000353170.9

KLHDC4-204, Transcript of kelch domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-204ENST00000353170 PCGF6Q9BYE7 350 aa31.99■■■□□ 2.71
KLHDC4-204ENST00000353170 MAGI1Q96QZ7 1491 aaPredicted RBP31.95■■■□□ 2.7
KLHDC4-204ENST00000353170 EFCAB5A4FU69 1503 aa31.94■■■□□ 2.7
KLHDC4-204ENST00000353170 SNAPC4Q5SXM2 1469 aa31.93■■■□□ 2.7
KLHDC4-204ENST00000353170 APLP2Q06481 763 aa31.91■■■□□ 2.7
KLHDC4-204ENST00000353170 SYNJ2O15056 1496 aa31.79■■■□□ 2.68
KLHDC4-204ENST00000353170 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
KLHDC4-204ENST00000353170 PPARGC1BQ86YN6 1023 aaKnown RBP31.78■■■□□ 2.68
KLHDC4-204ENST00000353170 IQGAP2Q13576 1575 aa31.75■■■□□ 2.67
KLHDC4-204ENST00000353170 SAMD9Q5K651 1589 aa31.72■■■□□ 2.67
KLHDC4-204ENST00000353170 CHMP7Q8WUX9 453 aaPredicted RBP31.71■■■□□ 2.67
KLHDC4-204ENST00000353170 KIAA0586Q9BVV6 1533 aa31.67■■■□□ 2.66
KLHDC4-204ENST00000353170 FHOD3Q2V2M9 1422 aa31.66■■■□□ 2.66
KLHDC4-204ENST00000353170 FMN1Q68DA7 1419 aa31.66■■■□□ 2.66
KLHDC4-204ENST00000353170 P3H3Q8IVL6 736 aa31.62■■■□□ 2.65
KLHDC4-204ENST00000353170 MAP3K1Q13233 1512 aa31.61■■■□□ 2.65
KLHDC4-204ENST00000353170 UGGT2Q9NYU1 1516 aa31.6■■■□□ 2.65
KLHDC4-204ENST00000353170 FYCO1Q9BQS8 1478 aa31.57■■■□□ 2.64
KLHDC4-204ENST00000353170 TTBK1Q5TCY1 1321 aaPredicted RBP31.55■■■□□ 2.64
KLHDC4-204ENST00000353170 FBLN2P98095 1184 aa31.55■■■□□ 2.64
KLHDC4-204ENST00000353170 PCF11O94913 1555 aaKnown RBP31.54■■■□□ 2.64
KLHDC4-204ENST00000353170 NUP160Q12769 1436 aa31.54■■■□□ 2.64
KLHDC4-204ENST00000353170 CASKIN1Q8WXD9 1431 aa31.54■■■□□ 2.64
KLHDC4-204ENST00000353170 CEP170Q5SW79 1584 aa31.53■■■□□ 2.64
KLHDC4-204ENST00000353170 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
KLHDC4-204ENST00000353170 CFAP43Q8NDM7 1665 aa31.44■■■□□ 2.62
KLHDC4-204ENST00000353170 KIAA0556O60303 1618 aa31.41■■■□□ 2.62
KLHDC4-204ENST00000353170 ATP1B4Q9UN42 357 aaPredicted RBP31.38■■■□□ 2.61
KLHDC4-204ENST00000353170 KANK4Q5T7N3 995 aaPredicted RBP31.37■■■□□ 2.61
KLHDC4-204ENST00000353170 DISP1Q96F81 1524 aa31.36■■■□□ 2.61
KLHDC4-204ENST00000353170 CHD1O14646 1710 aa31.36■■■□□ 2.61
KLHDC4-204ENST00000353170 CARMIL2Q6F5E8 1435 aa31.34■■■□□ 2.61
KLHDC4-204ENST00000353170 LRRC9Q6ZRR7 1453 aa31.34■■■□□ 2.61
KLHDC4-204ENST00000353170 HECW1Q76N89 1606 aa31.3■■■□□ 2.6
KLHDC4-204ENST00000353170 JPH4Q96JJ6 628 aa31.29■■■□□ 2.6
KLHDC4-204ENST00000353170 CCDC18Q5T9S5 1454 aa31.28■■■□□ 2.6
KLHDC4-204ENST00000353170 HRCP23327 699 aa31.17■■■□□ 2.58
KLHDC4-204ENST00000353170 RRBP1Q9P2E9 1410 aaKnown RBP31.17■■■□□ 2.58
KLHDC4-204ENST00000353170 LRRIQ1Q96JM4 1722 aa31.15■■■□□ 2.58
KLHDC4-204ENST00000353170 MTUS2Q5JR59 1369 aa31.15■■■□□ 2.58
KLHDC4-204ENST00000353170 RAPGEF6Q8TEU7 1601 aa31.13■■■□□ 2.57
KLHDC4-204ENST00000353170 EPRSP07814 1512 aaKnown RBP31.11■■■□□ 2.57
KLHDC4-204ENST00000353170 EHBP1L1Q8N3D4 1523 aa31.11■■■□□ 2.57
KLHDC4-204ENST00000353170 SHROOM2Q13796 1616 aa31.09■■■□□ 2.57
KLHDC4-204ENST00000353170 PRG4Q92954 1404 aaPredicted RBP31.08■■■□□ 2.57
KLHDC4-204ENST00000353170 CCNB3Q8WWL7 1395 aa31.07■■■□□ 2.56
KLHDC4-204ENST00000353170 SUPT6HQ7KZ85 1726 aaKnown RBP31.02■■■□□ 2.56
KLHDC4-204ENST00000353170 CLASP1Q7Z460 1538 aa31.02■■■□□ 2.56
KLHDC4-204ENST00000353170 NUP153P49790 1475 aaKnown RBP31■■■□□ 2.55
KLHDC4-204ENST00000353170 PHLDB1Q86UU1 1377 aa30.99■■■□□ 2.55
KLHDC4-204ENST00000353170 CDK13Q14004 1512 aaKnown RBP30.97■■■□□ 2.55
KLHDC4-204ENST00000353170 HNRNPUL2Q1KMD3 747 aaKnown RBP30.97■■■□□ 2.55
KLHDC4-204ENST00000353170 ZEB1P37275 1124 aaPredicted RBP30.96■■■□□ 2.55
KLHDC4-204ENST00000353170 CDK11AQ9UQ88 783 aaPredicted RBP30.96■■■□□ 2.55
KLHDC4-204ENST00000353170 PLB1Q6P1J6 1458 aa30.94■■■□□ 2.54
KLHDC4-204ENST00000353170 PTPRGP23470 1445 aa30.94■■■□□ 2.54
KLHDC4-204ENST00000353170 ABCA8O94911 1581 aa30.94■■■□□ 2.54
KLHDC4-204ENST00000353170 NCOA2Q15596 1464 aa30.93■■■□□ 2.54
KLHDC4-204ENST00000353170 MAGI3Q5TCQ9 1506 aa30.9■■■□□ 2.54
KLHDC4-204ENST00000353170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.89■■■□□ 2.54
KLHDC4-204ENST00000353170 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
KLHDC4-204ENST00000353170 MYOM3Q5VTT5 1437 aa30.85■■■□□ 2.53
KLHDC4-204ENST00000353170 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
KLHDC4-204ENST00000353170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.84■■■□□ 2.53
KLHDC4-204ENST00000353170 ARID3CA6NKF2 412 aa30.81■■■□□ 2.52
KLHDC4-204ENST00000353170 CCER1Q8TC90 406 aaPredicted RBP30.8■■■□□ 2.52
KLHDC4-204ENST00000353170 FAM50AQ14320 339 aaKnown RBP30.78■■■□□ 2.52
KLHDC4-204ENST00000353170 TROQ12816 1431 aaPredicted RBP30.77■■■□□ 2.52
KLHDC4-204ENST00000353170 UACAQ9BZF9 1416 aa30.77■■■□□ 2.52
KLHDC4-204ENST00000353170 ERCC6L2Q5T890 1561 aa30.74■■■□□ 2.51
KLHDC4-204ENST00000353170 ATP10BO94823 1461 aa30.71■■■□□ 2.51
KLHDC4-204ENST00000353170 MIA2Q96PC5 1412 aa30.71■■■□□ 2.51
KLHDC4-204ENST00000353170 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
KLHDC4-204ENST00000353170 ADCY10Q96PN6 1610 aa30.7■■■□□ 2.5
KLHDC4-204ENST00000353170 PLEKHD1A6NEE1 506 aa30.68■■■□□ 2.5
KLHDC4-204ENST00000353170 ITGAEP38570 1179 aa30.68■■■□□ 2.5
KLHDC4-204ENST00000353170 ABCC2Q92887 1545 aa30.67■■■□□ 2.5
KLHDC4-204ENST00000353170 PTPN23Q9H3S7 1636 aa30.67■■■□□ 2.5
KLHDC4-204ENST00000353170 TCOF1Q13428 1488 aaKnown RBP30.64■■■□□ 2.5
KLHDC4-204ENST00000353170 UHRF1BP1LA0JNW5 1464 aa30.62■■■□□ 2.49
KLHDC4-204ENST00000353170 KIF14Q15058 1648 aa30.6■■■□□ 2.49
KLHDC4-204ENST00000353170 ITSN2Q9NZM3 1697 aa30.6■■■□□ 2.49
KLHDC4-204ENST00000353170 SETD5Q9C0A6 1442 aa30.53■■■□□ 2.48
KLHDC4-204ENST00000353170 KDM5BQ9UGL1 1544 aa30.46■■■□□ 2.47
KLHDC4-204ENST00000353170 GPATCH8Q9UKJ3 1502 aaKnown RBP30.46■■■□□ 2.47
KLHDC4-204ENST00000353170 RAB3GAP2Q9H2M9 1393 aa30.45■■■□□ 2.47
KLHDC4-204ENST00000353170 CLSPNQ9HAW4 1339 aa30.45■■■□□ 2.46
KLHDC4-204ENST00000353170 ABCC10Q5T3U5 1492 aa30.44■■■□□ 2.46
KLHDC4-204ENST00000353170 CFDP1Q9UEE9 299 aaPredicted RBP30.43■■■□□ 2.46
KLHDC4-204ENST00000353170 ZCCHC11Q5TAX3 1644 aaKnown RBP30.43■■■□□ 2.46
KLHDC4-204ENST00000353170 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
KLHDC4-204ENST00000353170 DHX57Q6P158 1386 aaKnown RBP30.38■■■□□ 2.45
KLHDC4-204ENST00000353170 CDC42BPAQ5VT25 1732 aa30.38■■■□□ 2.45
KLHDC4-204ENST00000353170 PTPRKQ15262 1439 aa30.37■■■□□ 2.45
KLHDC4-204ENST00000353170 AKNAQ7Z591 1439 aa30.37■■■□□ 2.45
KLHDC4-204ENST00000353170 CAMSAP2Q08AD1 1489 aa30.36■■■□□ 2.45
KLHDC4-204ENST00000353170 DNMT1P26358 1616 aaKnown RBP30.36■■■□□ 2.45
KLHDC4-204ENST00000353170 DAPK1P53355 1430 aa30.32■■■□□ 2.44
KLHDC4-204ENST00000353170 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
KLHDC4-204ENST00000353170 NAIPQ13075 1403 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms