RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1.013e-6■■■□□ 15.2
TSC2-202ENST00000350773 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
TSC2-202ENST00000350773 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 1
TSC2-202ENST00000350773 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
TSC2-202ENST00000350773 ANP32EQ9BTT0 268 aa21.3■■□□□ 1
TSC2-202ENST00000350773 RRP7BPQ9NSQ0 103 aa21.29■■□□□ 1
TSC2-202ENST00000350773 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
TSC2-202ENST00000350773 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
TSC2-202ENST00000350773 ESF1Q9H501 851 aaKnown RBP21.25■□□□□ 0.99
TSC2-202ENST00000350773 SUPT16HQ9Y5B9 1047 aaKnown RBP21.19■□□□□ 0.98
TSC2-202ENST00000350773 BECN1Q14457 450 aa21.19■□□□□ 0.98
TSC2-202ENST00000350773 KIF27Q86VH2 1401 aa21.18■□□□□ 0.98
TSC2-202ENST00000350773 ARXQ96QS3 562 aa21.16■□□□□ 0.98
TSC2-202ENST00000350773 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
TSC2-202ENST00000350773 NACADO15069 1562 aa21.15■□□□□ 0.98
TSC2-202ENST00000350773 MYH16Q9H6N6 1097 aa21.14■□□□□ 0.97
TSC2-202ENST00000350773 PPP4R2Q9NY27 417 aa21.13■□□□□ 0.97
TSC2-202ENST00000350773 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
TSC2-202ENST00000350773 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
TSC2-202ENST00000350773 PPM1GO15355 546 aaPredicted RBP21.07■□□□□ 0.96
TSC2-202ENST00000350773 SIN3AQ96ST3 1273 aa21.05■□□□□ 0.96
TSC2-202ENST00000350773 CDCA8Q53HL2 280 aa21.04■□□□□ 0.96
TSC2-202ENST00000350773 BAZ1AQ9NRL2 1556 aaPredicted RBP21.04■□□□□ 0.96
TSC2-202ENST00000350773 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
TSC2-202ENST00000350773 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
TSC2-202ENST00000350773 CARD11Q9BXL7 1154 aa21.02■□□□□ 0.96
TSC2-202ENST00000350773 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
TSC2-202ENST00000350773 KNSTRNQ9Y448 316 aa21■□□□□ 0.95
TSC2-202ENST00000350773 TRIM44Q96DX7 344 aaPredicted RBP20.99■□□□□ 0.95
TSC2-202ENST00000350773 GOLGA6L22H0YM25 854 aa20.99■□□□□ 0.95
TSC2-202ENST00000350773 CFDP1Q9UEE9 299 aaPredicted RBP20.98■□□□□ 0.95
TSC2-202ENST00000350773 NOP58Q9Y2X3 529 aaKnown RBP20.98■□□□□ 0.95
TSC2-202ENST00000350773 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
TSC2-202ENST00000350773 CFAP53Q96M91 514 aa20.98■□□□□ 0.95
TSC2-202ENST00000350773 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
TSC2-202ENST00000350773 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
TSC2-202ENST00000350773 NCLP19338 710 aaKnown RBP20.92■□□□□ 0.94
TSC2-202ENST00000350773 SOGA1O94964 1423 aa20.92■□□□□ 0.94
TSC2-202ENST00000350773 SENP3-EIF4A1A0A087X0R7 540 aa20.91■□□□□ 0.94
TSC2-202ENST00000350773 VPS8Q8N3P4 1428 aa20.9■□□□□ 0.94
TSC2-202ENST00000350773 FTSJ3Q8IY81 847 aaKnown RBP20.87■□□□□ 0.93
TSC2-202ENST00000350773 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
TSC2-202ENST00000350773 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
TSC2-202ENST00000350773 LAS1LQ9Y4W2 734 aaKnown RBP20.86■□□□□ 0.93
TSC2-202ENST00000350773 ERICH6BQ5W0A0 696 aa20.86■□□□□ 0.93
TSC2-202ENST00000350773 B4GALNT3Q6L9W6 998 aa20.86■□□□□ 0.93
TSC2-202ENST00000350773 KCNH8Q96L42 1107 aa20.85■□□□□ 0.93
TSC2-202ENST00000350773 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
TSC2-202ENST00000350773 PLPPR3Q6T4P5 718 aa20.82■□□□□ 0.92
TSC2-202ENST00000350773 RGS3P49796 1198 aa20.8■□□□□ 0.92
TSC2-202ENST00000350773 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
TSC2-202ENST00000350773 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
TSC2-202ENST00000350773 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.92
TSC2-202ENST00000350773 PPP1R15AO75807 674 aaPredicted RBP20.77■□□□□ 0.92
TSC2-202ENST00000350773 ARHGAP35Q9NRY4 1499 aa20.77■□□□□ 0.92
TSC2-202ENST00000350773 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
TSC2-202ENST00000350773 NUDCQ9Y266 331 aa20.76■□□□□ 0.91
TSC2-202ENST00000350773 MS4A1P11836 297 aa20.75■□□□□ 0.91
TSC2-202ENST00000350773 NEUROD2Q15784 382 aa20.75■□□□□ 0.91
TSC2-202ENST00000350773 HSPA5P11021 654 aaKnown RBP20.74■□□□□ 0.91
TSC2-202ENST00000350773 CHMP4BQ9H444 224 aaKnown RBP20.74■□□□□ 0.91
TSC2-202ENST00000350773 PTMAP06454 111 aaKnown RBP20.73■□□□□ 0.91
TSC2-202ENST00000350773 CUX2O14529 1486 aa20.73■□□□□ 0.91
TSC2-202ENST00000350773 TMF1P82094 1093 aa20.73■□□□□ 0.91
TSC2-202ENST00000350773 FRAT1Q92837 279 aaPredicted RBP20.73■□□□□ 0.91
TSC2-202ENST00000350773 ABCC8Q09428 1581 aa20.71■□□□□ 0.91
TSC2-202ENST00000350773 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
TSC2-202ENST00000350773 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
TSC2-202ENST00000350773 KANK4Q5T7N3 995 aaPredicted RBP20.67■□□□□ 0.9
TSC2-202ENST00000350773 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
TSC2-202ENST00000350773 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
TSC2-202ENST00000350773 RAB3GAP2Q9H2M9 1393 aa20.67■□□□□ 0.9
TSC2-202ENST00000350773 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
TSC2-202ENST00000350773 RTN4Q9NQC3 1192 aaKnown RBP20.67■□□□□ 0.9
TSC2-202ENST00000350773 NAP1L5Q96NT1 182 aaPredicted RBP20.66■□□□□ 0.9
TSC2-202ENST00000350773 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
TSC2-202ENST00000350773 EIF4G1Q04637 1599 aaKnown RBP20.64■□□□□ 0.89
TSC2-202ENST00000350773 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
TSC2-202ENST00000350773 PNNQ9H307 717 aaKnown RBP20.63■□□□□ 0.89
TSC2-202ENST00000350773 DNTTIP2Q5QJE6 756 aaKnown RBP20.63■□□□□ 0.89
TSC2-202ENST00000350773 C14orf37Q86TY3 774 aa20.63■□□□□ 0.89
TSC2-202ENST00000350773 ZBTB7CA1YPR0 619 aa20.62■□□□□ 0.89
TSC2-202ENST00000350773 ZRSR1Q15695 479 aaKnown RBP20.61■□□□□ 0.89
TSC2-202ENST00000350773 KTN1Q86UP2 1357 aaKnown RBP20.61■□□□□ 0.89
TSC2-202ENST00000350773 L1TD1Q5T7N2 865 aaKnown RBP20.6■□□□□ 0.89
TSC2-202ENST00000350773 HSCBQ8IWL3 235 aa20.59■□□□□ 0.89
TSC2-202ENST00000350773 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.89
TSC2-202ENST00000350773 POGKQ9P215 609 aa20.58■□□□□ 0.88
TSC2-202ENST00000350773 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
TSC2-202ENST00000350773 RALBP1Q15311 655 aa20.55■□□□□ 0.88
TSC2-202ENST00000350773 TCERG1O14776 1098 aaKnown RBP20.54■□□□□ 0.88
TSC2-202ENST00000350773 KANK1Q14678 1352 aa20.54■□□□□ 0.88
TSC2-202ENST00000350773 CDK11BP21127 795 aaKnown RBP20.54■□□□□ 0.88
TSC2-202ENST00000350773 RCAN3Q9UKA8 241 aa20.53■□□□□ 0.88
TSC2-202ENST00000350773 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
TSC2-202ENST00000350773 PKD2Q13563 968 aa20.52■□□□□ 0.88
TSC2-202ENST00000350773 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
TSC2-202ENST00000350773 TOP2AP11388 1531 aaKnown RBP20.5■□□□□ 0.87
TSC2-202ENST00000350773 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
TSC2-202ENST00000350773 MORC1Q86VD1 984 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms