RNA–Protein interactions for RNA: ENST00000350612.10

SUPT20H-201, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT20H, Length 2,739 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-201ENST00000350612 HRCP23327 699 aa24.11■■□□□ 1.45
SUPT20H-201ENST00000350612 SAMD9Q5K651 1589 aa24.09■■□□□ 1.45
SUPT20H-201ENST00000350612 APLP2Q06481 763 aa24.08■■□□□ 1.44
SUPT20H-201ENST00000350612 AQRO60306 1485 aaKnown RBP eCLIP24.07■■□□□ 1.448e-6■■■■□ 23.2
SUPT20H-201ENST00000350612 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
SUPT20H-201ENST00000350612 MAGI1Q96QZ7 1491 aaPredicted RBP24.02■■□□□ 1.44
SUPT20H-201ENST00000350612 CFAP43Q8NDM7 1665 aa23.99■■□□□ 1.43
SUPT20H-201ENST00000350612 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
SUPT20H-201ENST00000350612 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
SUPT20H-201ENST00000350612 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
SUPT20H-201ENST00000350612 FYCO1Q9BQS8 1478 aa23.97■■□□□ 1.43
SUPT20H-201ENST00000350612 TIAM1Q13009 1591 aa23.96■■□□□ 1.43
SUPT20H-201ENST00000350612 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
SUPT20H-201ENST00000350612 FMN1Q68DA7 1419 aa23.94■■□□□ 1.42
SUPT20H-201ENST00000350612 PCF11O94913 1555 aaKnown RBP23.94■■□□□ 1.42
SUPT20H-201ENST00000350612 CASKIN1Q8WXD9 1431 aa23.92■■□□□ 1.42
SUPT20H-201ENST00000350612 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
SUPT20H-201ENST00000350612 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
SUPT20H-201ENST00000350612 SYNJ2O15056 1496 aa23.88■■□□□ 1.41
SUPT20H-201ENST00000350612 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
SUPT20H-201ENST00000350612 KIAA0586Q9BVV6 1533 aa23.86■■□□□ 1.41
SUPT20H-201ENST00000350612 ZEB1P37275 1124 aaPredicted RBP23.85■■□□□ 1.41
SUPT20H-201ENST00000350612 LRRC9Q6ZRR7 1453 aa23.8■■□□□ 1.4
SUPT20H-201ENST00000350612 RRBP1Q9P2E9 1410 aaKnown RBP23.79■■□□□ 1.4
SUPT20H-201ENST00000350612 NUP160Q12769 1436 aa23.74■■□□□ 1.39
SUPT20H-201ENST00000350612 KIAA0556O60303 1618 aa23.73■■□□□ 1.39
SUPT20H-201ENST00000350612 CEP170Q5SW79 1584 aa23.73■■□□□ 1.39
SUPT20H-201ENST00000350612 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
SUPT20H-201ENST00000350612 HECW1Q76N89 1606 aa23.73■■□□□ 1.39
SUPT20H-201ENST00000350612 TTBK1Q5TCY1 1321 aaPredicted RBP23.71■■□□□ 1.39
SUPT20H-201ENST00000350612 CCDC18Q5T9S5 1454 aa23.71■■□□□ 1.39
SUPT20H-201ENST00000350612 LRRIQ1Q96JM4 1722 aa23.7■■□□□ 1.38
SUPT20H-201ENST00000350612 P3H3Q8IVL6 736 aa23.67■■□□□ 1.38
SUPT20H-201ENST00000350612 DISP1Q96F81 1524 aa23.66■■□□□ 1.38
SUPT20H-201ENST00000350612 CHMP7Q8WUX9 453 aaPredicted RBP23.63■■□□□ 1.37
SUPT20H-201ENST00000350612 EHBP1L1Q8N3D4 1523 aa23.62■■□□□ 1.37
SUPT20H-201ENST00000350612 CCNB3Q8WWL7 1395 aa23.6■■□□□ 1.37
SUPT20H-201ENST00000350612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
SUPT20H-201ENST00000350612 SUPT6HQ7KZ85 1726 aaKnown RBP23.57■■□□□ 1.36
SUPT20H-201ENST00000350612 CHD1O14646 1710 aa23.55■■□□□ 1.36
SUPT20H-201ENST00000350612 RAPGEF6Q8TEU7 1601 aa23.54■■□□□ 1.36
SUPT20H-201ENST00000350612 CARMIL2Q6F5E8 1435 aa23.54■■□□□ 1.36
SUPT20H-201ENST00000350612 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
SUPT20H-201ENST00000350612 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
SUPT20H-201ENST00000350612 PHLDB1Q86UU1 1377 aa23.49■■□□□ 1.35
SUPT20H-201ENST00000350612 MTUS2Q5JR59 1369 aa23.48■■□□□ 1.35
SUPT20H-201ENST00000350612 SHROOM2Q13796 1616 aa23.47■■□□□ 1.35
SUPT20H-201ENST00000350612 CCER1Q8TC90 406 aaPredicted RBP23.46■■□□□ 1.35
SUPT20H-201ENST00000350612 ATP1B4Q9UN42 357 aaPredicted RBP23.45■■□□□ 1.34
SUPT20H-201ENST00000350612 HNRNPUL2Q1KMD3 747 aaKnown RBP23.42■■□□□ 1.34
SUPT20H-201ENST00000350612 NCOA2Q15596 1464 aa23.42■■□□□ 1.34
SUPT20H-201ENST00000350612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.41■■□□□ 1.34
SUPT20H-201ENST00000350612 MAGI3Q5TCQ9 1506 aa23.41■■□□□ 1.34
SUPT20H-201ENST00000350612 NUP153P49790 1475 aaKnown RBP23.41■■□□□ 1.34
SUPT20H-201ENST00000350612 JPH4Q96JJ6 628 aa23.4■■□□□ 1.34
SUPT20H-201ENST00000350612 FBLN2P98095 1184 aa23.4■■□□□ 1.34
SUPT20H-201ENST00000350612 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
SUPT20H-201ENST00000350612 ABCA8O94911 1581 aa23.38■■□□□ 1.33
SUPT20H-201ENST00000350612 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
SUPT20H-201ENST00000350612 CDK13Q14004 1512 aaKnown RBP23.36■■□□□ 1.33
SUPT20H-201ENST00000350612 ADCY10Q96PN6 1610 aa23.34■■□□□ 1.33
SUPT20H-201ENST00000350612 CLSPNQ9HAW4 1339 aa23.34■■□□□ 1.33
SUPT20H-201ENST00000350612 TCOF1Q13428 1488 aaKnown RBP23.33■■□□□ 1.33
SUPT20H-201ENST00000350612 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
SUPT20H-201ENST00000350612 MIA2Q96PC5 1412 aa23.31■■□□□ 1.32
SUPT20H-201ENST00000350612 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
SUPT20H-201ENST00000350612 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
SUPT20H-201ENST00000350612 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
SUPT20H-201ENST00000350612 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
SUPT20H-201ENST00000350612 ITSN2Q9NZM3 1697 aa23.24■■□□□ 1.31
SUPT20H-201ENST00000350612 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
SUPT20H-201ENST00000350612 SETD5Q9C0A6 1442 aa23.23■■□□□ 1.31
SUPT20H-201ENST00000350612 DHX57Q6P158 1386 aaKnown RBP23.2■■□□□ 1.3
SUPT20H-201ENST00000350612 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
SUPT20H-201ENST00000350612 PTPRGP23470 1445 aa23.18■■□□□ 1.3
SUPT20H-201ENST00000350612 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
SUPT20H-201ENST00000350612 RAB3GAP2Q9H2M9 1393 aa23.15■■□□□ 1.3
SUPT20H-201ENST00000350612 KIF14Q15058 1648 aa23.13■■□□□ 1.29
SUPT20H-201ENST00000350612 HFM1A2PYH4 1435 aa23.13■■□□□ 1.29
SUPT20H-201ENST00000350612 GCC2Q8IWJ2 1684 aa23.13■■□□□ 1.29
SUPT20H-201ENST00000350612 ATP10BO94823 1461 aa23.12■■□□□ 1.29
SUPT20H-201ENST00000350612 UACAQ9BZF9 1416 aa23.11■■□□□ 1.29
SUPT20H-201ENST00000350612 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
SUPT20H-201ENST00000350612 DNMT1P26358 1616 aaKnown RBP23.09■■□□□ 1.29
SUPT20H-201ENST00000350612 UHRF1BP1LA0JNW5 1464 aa23.09■■□□□ 1.29
SUPT20H-201ENST00000350612 ITGAEP38570 1179 aa23.06■■□□□ 1.28
SUPT20H-201ENST00000350612 ACIN1Q9UKV3 1341 aaKnown RBP23.05■■□□□ 1.28
SUPT20H-201ENST00000350612 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
SUPT20H-201ENST00000350612 ABCC10Q5T3U5 1492 aa23.04■■□□□ 1.28
SUPT20H-201ENST00000350612 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
SUPT20H-201ENST00000350612 CDC42BPAQ5VT25 1732 aa23.03■■□□□ 1.28
SUPT20H-201ENST00000350612 GPATCH8Q9UKJ3 1502 aaKnown RBP23.02■■□□□ 1.28
SUPT20H-201ENST00000350612 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
SUPT20H-201ENST00000350612 ROCK1Q13464 1354 aa23■■□□□ 1.27
SUPT20H-201ENST00000350612 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
SUPT20H-201ENST00000350612 NAIPQ13075 1403 aa23■■□□□ 1.27
SUPT20H-201ENST00000350612 MAPKBP1O60336 1514 aa22.99■■□□□ 1.27
SUPT20H-201ENST00000350612 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
SUPT20H-201ENST00000350612 DAPK1P53355 1430 aa22.97■■□□□ 1.27
SUPT20H-201ENST00000350612 CAMSAP2Q08AD1 1489 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms