RNA–Protein interactions for RNA: ENST00000350592.7

C1orf43-201, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-201ENST00000350592 MAGI1Q96QZ7 1491 aaPredicted RBP25.85■■□□□ 1.73
C1orf43-201ENST00000350592 TRIM26Q12899 539 aaPredicted RBP25.84■■□□□ 1.73
C1orf43-201ENST00000350592 EFCAB5A4FU69 1503 aa25.79■■□□□ 1.72
C1orf43-201ENST00000350592 PCGF6Q9BYE7 350 aa25.77■■□□□ 1.72
C1orf43-201ENST00000350592 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
C1orf43-201ENST00000350592 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
C1orf43-201ENST00000350592 PPARGC1BQ86YN6 1023 aaKnown RBP25.7■■□□□ 1.7
C1orf43-201ENST00000350592 APLP2Q06481 763 aa25.68■■□□□ 1.7
C1orf43-201ENST00000350592 IQGAP2Q13576 1575 aa25.68■■□□□ 1.7
C1orf43-201ENST00000350592 SAMD9Q5K651 1589 aa25.67■■□□□ 1.7
C1orf43-201ENST00000350592 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
C1orf43-201ENST00000350592 KIAA0586Q9BVV6 1533 aa25.64■■□□□ 1.7
C1orf43-201ENST00000350592 FHOD3Q2V2M9 1422 aa25.62■■□□□ 1.69
C1orf43-201ENST00000350592 P3H3Q8IVL6 736 aa25.6■■□□□ 1.69
C1orf43-201ENST00000350592 UGGT2Q9NYU1 1516 aa25.58■■□□□ 1.69
C1orf43-201ENST00000350592 NUP160Q12769 1436 aa25.57■■□□□ 1.68
C1orf43-201ENST00000350592 FMN1Q68DA7 1419 aa25.56■■□□□ 1.68
C1orf43-201ENST00000350592 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
C1orf43-201ENST00000350592 FBLN2P98095 1184 aa25.55■■□□□ 1.68
C1orf43-201ENST00000350592 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
C1orf43-201ENST00000350592 CASKIN1Q8WXD9 1431 aa25.5■■□□□ 1.67
C1orf43-201ENST00000350592 PCF11O94913 1555 aaKnown RBP25.5■■□□□ 1.67
C1orf43-201ENST00000350592 FYCO1Q9BQS8 1478 aa25.49■■□□□ 1.67
C1orf43-201ENST00000350592 TTBK1Q5TCY1 1321 aaPredicted RBP25.48■■□□□ 1.67
C1orf43-201ENST00000350592 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
C1orf43-201ENST00000350592 DISP1Q96F81 1524 aa25.42■■□□□ 1.66
C1orf43-201ENST00000350592 KIAA0556O60303 1618 aa25.42■■□□□ 1.66
C1orf43-201ENST00000350592 CHD1O14646 1710 aa25.41■■□□□ 1.66
C1orf43-201ENST00000350592 KANK4Q5T7N3 995 aaPredicted RBP25.41■■□□□ 1.66
C1orf43-201ENST00000350592 CFAP43Q8NDM7 1665 aa25.38■■□□□ 1.65
C1orf43-201ENST00000350592 JPH4Q96JJ6 628 aa25.36■■□□□ 1.65
C1orf43-201ENST00000350592 LRRC9Q6ZRR7 1453 aa25.33■■□□□ 1.65
C1orf43-201ENST00000350592 ATP1B4Q9UN42 357 aaPredicted RBP25.33■■□□□ 1.65
C1orf43-201ENST00000350592 CARMIL2Q6F5E8 1435 aa25.32■■□□□ 1.64
C1orf43-201ENST00000350592 HECW1Q76N89 1606 aa25.28■■□□□ 1.64
C1orf43-201ENST00000350592 CCDC18Q5T9S5 1454 aa25.24■■□□□ 1.63
C1orf43-201ENST00000350592 LRRIQ1Q96JM4 1722 aa25.23■■□□□ 1.63
C1orf43-201ENST00000350592 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
C1orf43-201ENST00000350592 PRG4Q92954 1404 aaPredicted RBP25.19■■□□□ 1.62
C1orf43-201ENST00000350592 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
C1orf43-201ENST00000350592 RAPGEF6Q8TEU7 1601 aa25.17■■□□□ 1.62
C1orf43-201ENST00000350592 EPRSP07814 1512 aaKnown RBP25.17■■□□□ 1.62
C1orf43-201ENST00000350592 CLASP1Q7Z460 1538 aa25.16■■□□□ 1.62
C1orf43-201ENST00000350592 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.61
C1orf43-201ENST00000350592 EHBP1L1Q8N3D4 1523 aa25.11■■□□□ 1.61
C1orf43-201ENST00000350592 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
C1orf43-201ENST00000350592 PHLDB1Q86UU1 1377 aa25.09■■□□□ 1.61
C1orf43-201ENST00000350592 CCNB3Q8WWL7 1395 aa25.08■■□□□ 1.61
C1orf43-201ENST00000350592 PLB1Q6P1J6 1458 aa25.07■■□□□ 1.6
C1orf43-201ENST00000350592 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
C1orf43-201ENST00000350592 HRCP23327 699 aa25.07■■□□□ 1.6
C1orf43-201ENST00000350592 ABCA8O94911 1581 aa25.06■■□□□ 1.6
C1orf43-201ENST00000350592 PTPRGP23470 1445 aa25.05■■□□□ 1.6
C1orf43-201ENST00000350592 MAGI3Q5TCQ9 1506 aa25.05■■□□□ 1.6
C1orf43-201ENST00000350592 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
C1orf43-201ENST00000350592 NCOA2Q15596 1464 aa25■■□□□ 1.59
C1orf43-201ENST00000350592 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
C1orf43-201ENST00000350592 ARHGEF11O15085 1522 aa24.99■■□□□ 1.59
C1orf43-201ENST00000350592 CDK11AQ9UQ88 783 aaPredicted RBP24.98■■□□□ 1.59
C1orf43-201ENST00000350592 ERCC6L2Q5T890 1561 aa24.97■■□□□ 1.59
C1orf43-201ENST00000350592 ARID3CA6NKF2 412 aa24.96■■□□□ 1.59
C1orf43-201ENST00000350592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
C1orf43-201ENST00000350592 MYOM3Q5VTT5 1437 aa24.92■■□□□ 1.58
C1orf43-201ENST00000350592 UACAQ9BZF9 1416 aa24.92■■□□□ 1.58
C1orf43-201ENST00000350592 FGD6Q6ZV73 1430 aa24.91■■□□□ 1.58
C1orf43-201ENST00000350592 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.91■■□□□ 1.58
C1orf43-201ENST00000350592 OSCARQ8IYS5 282 aa24.91■■□□□ 1.58
C1orf43-201ENST00000350592 ATP10BO94823 1461 aa24.89■■□□□ 1.58
C1orf43-201ENST00000350592 TROQ12816 1431 aaPredicted RBP24.89■■□□□ 1.57
C1orf43-201ENST00000350592 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
C1orf43-201ENST00000350592 FAM50AQ14320 339 aaKnown RBP24.84■■□□□ 1.57
C1orf43-201ENST00000350592 ABCC2Q92887 1545 aa24.84■■□□□ 1.57
C1orf43-201ENST00000350592 ADCY10Q96PN6 1610 aa24.82■■□□□ 1.56
C1orf43-201ENST00000350592 MIA2Q96PC5 1412 aa24.81■■□□□ 1.56
C1orf43-201ENST00000350592 UHRF1BP1LA0JNW5 1464 aa24.8■■□□□ 1.56
C1orf43-201ENST00000350592 PLEKHD1A6NEE1 506 aa24.8■■□□□ 1.56
C1orf43-201ENST00000350592 TCOF1Q13428 1488 aaKnown RBP24.78■■□□□ 1.56
C1orf43-201ENST00000350592 PTPN23Q9H3S7 1636 aa24.78■■□□□ 1.56
C1orf43-201ENST00000350592 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
C1orf43-201ENST00000350592 ITGAEP38570 1179 aa24.76■■□□□ 1.55
C1orf43-201ENST00000350592 KIF14Q15058 1648 aa24.72■■□□□ 1.55
C1orf43-201ENST00000350592 KDM5BQ9UGL1 1544 aa24.68■■□□□ 1.54
C1orf43-201ENST00000350592 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
C1orf43-201ENST00000350592 ABCC10Q5T3U5 1492 aa24.67■■□□□ 1.54
C1orf43-201ENST00000350592 GPATCH8Q9UKJ3 1502 aaKnown RBP24.66■■□□□ 1.54
C1orf43-201ENST00000350592 SETD5Q9C0A6 1442 aa24.65■■□□□ 1.54
C1orf43-201ENST00000350592 ZCCHC11Q5TAX3 1644 aaKnown RBP24.64■■□□□ 1.53
C1orf43-201ENST00000350592 PTPRKQ15262 1439 aa24.61■■□□□ 1.53
C1orf43-201ENST00000350592 RAB3GAP2Q9H2M9 1393 aa24.59■■□□□ 1.53
C1orf43-201ENST00000350592 CFDP1Q9UEE9 299 aaPredicted RBP24.59■■□□□ 1.53
C1orf43-201ENST00000350592 CDC42BPAQ5VT25 1732 aa24.57■■□□□ 1.52
C1orf43-201ENST00000350592 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
C1orf43-201ENST00000350592 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
C1orf43-201ENST00000350592 DHX57Q6P158 1386 aaKnown RBP24.53■■□□□ 1.52
C1orf43-201ENST00000350592 DNMT1P26358 1616 aaKnown RBP24.53■■□□□ 1.52
C1orf43-201ENST00000350592 ZNF644Q9H582 1327 aaPredicted RBP24.52■■□□□ 1.52
C1orf43-201ENST00000350592 DAPK1P53355 1430 aa24.51■■□□□ 1.51
C1orf43-201ENST00000350592 AKNAQ7Z591 1439 aa24.51■■□□□ 1.51
C1orf43-201ENST00000350592 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.515e-8■■■□□ 14.8
C1orf43-201ENST00000350592 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms