RNA–Protein interactions for RNA: ENST00000350061.9

CACNA1D-202, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1D, Length 7,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-202ENST00000350061 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
CACNA1D-202ENST00000350061 RNF123Q5XPI4 1314 aa12.48□□□□□ -0.41
CACNA1D-202ENST00000350061 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
CACNA1D-202ENST00000350061 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
CACNA1D-202ENST00000350061 WIZO95785 1651 aa12.46□□□□□ -0.41
CACNA1D-202ENST00000350061 KIF27Q86VH2 1401 aa12.44□□□□□ -0.42
CACNA1D-202ENST00000350061 HNRNPUQ00839 825 aaKnown RBP eCLIP12.43□□□□□ -0.42
CACNA1D-202ENST00000350061 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
CACNA1D-202ENST00000350061 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
CACNA1D-202ENST00000350061 DEKP35659 375 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-202ENST00000350061 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
CACNA1D-202ENST00000350061 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
CACNA1D-202ENST00000350061 FHAD1B1AJZ9 1412 aa12.41□□□□□ -0.42
CACNA1D-202ENST00000350061 ITGAEP38570 1179 aa12.41□□□□□ -0.42
CACNA1D-202ENST00000350061 ZBED9Q6R2W3 1325 aa12.4□□□□□ -0.42
CACNA1D-202ENST00000350061 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
CACNA1D-202ENST00000350061 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
CACNA1D-202ENST00000350061 IGF1RP08069 1367 aa12.39□□□□□ -0.43
CACNA1D-202ENST00000350061 ARHGAP35Q9NRY4 1499 aa12.39□□□□□ -0.43
CACNA1D-202ENST00000350061 TONSLQ96HA7 1378 aa12.37□□□□□ -0.43
CACNA1D-202ENST00000350061 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
CACNA1D-202ENST00000350061 HFM1A2PYH4 1435 aa12.36□□□□□ -0.43
CACNA1D-202ENST00000350061 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
CACNA1D-202ENST00000350061 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
CACNA1D-202ENST00000350061 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
CACNA1D-202ENST00000350061 NOP58Q9Y2X3 529 aaKnown RBP12.34□□□□□ -0.43
CACNA1D-202ENST00000350061 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
CACNA1D-202ENST00000350061 SYNJ1O43426 1573 aa12.33□□□□□ -0.44
CACNA1D-202ENST00000350061 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
CACNA1D-202ENST00000350061 EIF4G2P78344 907 aaKnown RBP eCLIP12.29□□□□□ -0.44
CACNA1D-202ENST00000350061 AKNAQ7Z591 1439 aa12.28□□□□□ -0.44
CACNA1D-202ENST00000350061 LRRC9Q6ZRR7 1453 aa12.27□□□□□ -0.45
CACNA1D-202ENST00000350061 NAIPQ13075 1403 aa12.25□□□□□ -0.45
CACNA1D-202ENST00000350061 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
CACNA1D-202ENST00000350061 NCOA2Q15596 1464 aa12.25□□□□□ -0.45
CACNA1D-202ENST00000350061 MRS2Q9HD23 443 aa12.25□□□□□ -0.45
CACNA1D-202ENST00000350061 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
CACNA1D-202ENST00000350061 B4GALNT3Q6L9W6 998 aa12.24□□□□□ -0.45
CACNA1D-202ENST00000350061 MS4A1P11836 297 aa12.24□□□□□ -0.45
CACNA1D-202ENST00000350061 HIRIP3Q9BW71 556 aaPredicted RBP12.24□□□□□ -0.45
CACNA1D-202ENST00000350061 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
CACNA1D-202ENST00000350061 CCDC184Q52MB2 194 aa12.23□□□□□ -0.45
CACNA1D-202ENST00000350061 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
CACNA1D-202ENST00000350061 RTL5Q5HYW3 569 aaPredicted RBP12.23□□□□□ -0.45
CACNA1D-202ENST00000350061 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
CACNA1D-202ENST00000350061 CCDC18Q5T9S5 1454 aa12.22□□□□□ -0.45
CACNA1D-202ENST00000350061 FGD6Q6ZV73 1430 aa12.21□□□□□ -0.45
CACNA1D-202ENST00000350061 CCDC7Q96M83 1385 aa12.21□□□□□ -0.45
CACNA1D-202ENST00000350061 PPM1GO15355 546 aaPredicted RBP12.21□□□□□ -0.46
CACNA1D-202ENST00000350061 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 NUDCQ9Y266 331 aa12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 CNTLNQ9NXG0 1405 aa12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 ARID4BQ4LE39 1312 aaPredicted RBP12.2□□□□□ -0.46
CACNA1D-202ENST00000350061 TCERG1O14776 1098 aaKnown RBP12.19□□□□□ -0.46
CACNA1D-202ENST00000350061 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
CACNA1D-202ENST00000350061 ANP32AP39687 249 aaKnown RBP12.19□□□□□ -0.46
CACNA1D-202ENST00000350061 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
CACNA1D-202ENST00000350061 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
CACNA1D-202ENST00000350061 CFTRP13569 1480 aa12.18□□□□□ -0.46
CACNA1D-202ENST00000350061 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
CACNA1D-202ENST00000350061 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
CACNA1D-202ENST00000350061 AQRO60306 1485 aaKnown RBP eCLIP12.17□□□□□ -0.46
CACNA1D-202ENST00000350061 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
CACNA1D-202ENST00000350061 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
CACNA1D-202ENST00000350061 PTPRKQ15262 1439 aa12.16□□□□□ -0.46
CACNA1D-202ENST00000350061 FAM50AQ14320 339 aaKnown RBP12.15□□□□□ -0.46
CACNA1D-202ENST00000350061 UBE2Q2Q8WVN8 375 aa12.15□□□□□ -0.46
CACNA1D-202ENST00000350061 BACH2Q9BYV9 841 aa12.15□□□□□ -0.46
CACNA1D-202ENST00000350061 TIAM1Q13009 1591 aa12.14□□□□□ -0.47
CACNA1D-202ENST00000350061 SALL2Q9Y467 1007 aaPredicted RBP12.14□□□□□ -0.47
CACNA1D-202ENST00000350061 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
CACNA1D-202ENST00000350061 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
CACNA1D-202ENST00000350061 KIF7Q2M1P5 1343 aa12.13□□□□□ -0.47
CACNA1D-202ENST00000350061 LRPPRCP42704 1394 aaKnown RBP12.12□□□□□ -0.47
CACNA1D-202ENST00000350061 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
CACNA1D-202ENST00000350061 DHX29Q7Z478 1369 aaKnown RBP12.1□□□□□ -0.47
CACNA1D-202ENST00000350061 MIA2Q96PC5 1412 aa12.1□□□□□ -0.47
CACNA1D-202ENST00000350061 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
CACNA1D-202ENST00000350061 INSRP06213 1382 aa12.1□□□□□ -0.47
CACNA1D-202ENST00000350061 NBPF8Q3BBV2 869 aa12.09□□□□□ -0.47
CACNA1D-202ENST00000350061 MTUS2Q5JR59 1369 aa12.09□□□□□ -0.47
CACNA1D-202ENST00000350061 PDE4AP27815 886 aa12.08□□□□□ -0.48
CACNA1D-202ENST00000350061 ANKRD30BQ9BXX2 1392 aa12.08□□□□□ -0.48
CACNA1D-202ENST00000350061 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
CACNA1D-202ENST00000350061 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
CACNA1D-202ENST00000350061 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
CACNA1D-202ENST00000350061 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
CACNA1D-202ENST00000350061 ROCK2O75116 1388 aaKnown RBP12.05□□□□□ -0.48
CACNA1D-202ENST00000350061 CADPSQ9ULU8 1353 aa12.04□□□□□ -0.48
CACNA1D-202ENST00000350061 NEFMP07197 916 aa12.03□□□□□ -0.48
CACNA1D-202ENST00000350061 RPRD2Q5VT52 1461 aaKnown RBP12.02□□□□□ -0.49
CACNA1D-202ENST00000350061 GSE1Q14687 1217 aa12.02□□□□□ -0.49
CACNA1D-202ENST00000350061 FYCO1Q9BQS8 1478 aa12.01□□□□□ -0.49
CACNA1D-202ENST00000350061 NBR1Q14596 966 aa12.01□□□□□ -0.49
CACNA1D-202ENST00000350061 MPHOSPH9Q99550 1183 aa12.01□□□□□ -0.49
CACNA1D-202ENST00000350061 NLRP13Q86W25 1043 aa12□□□□□ -0.49
CACNA1D-202ENST00000350061 CUX1P39880 1505 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms