RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 RBM10P98175 930 aaKnown RBP16.93■□□□□ 0.3
CTNNB1-201ENST00000349496 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
CTNNB1-201ENST00000349496 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
CTNNB1-201ENST00000349496 RSPH6AQ9H0K4 717 aa16.91■□□□□ 0.3
CTNNB1-201ENST00000349496 NEFMP07197 916 aa16.88■□□□□ 0.29
CTNNB1-201ENST00000349496 FGD1P98174 961 aa16.88■□□□□ 0.29
CTNNB1-201ENST00000349496 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
CTNNB1-201ENST00000349496 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
CTNNB1-201ENST00000349496 ZBTB47Q9UFB7 747 aaPredicted RBP16.83■□□□□ 0.28
CTNNB1-201ENST00000349496 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
CTNNB1-201ENST00000349496 SYNJ1O43426 1573 aa16.8■□□□□ 0.28
CTNNB1-201ENST00000349496 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
CTNNB1-201ENST00000349496 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
CTNNB1-201ENST00000349496 ATAD2BQ9ULI0 1458 aa16.79■□□□□ 0.28
CTNNB1-201ENST00000349496 BRPF3Q9ULD4 1205 aa16.78■□□□□ 0.28
CTNNB1-201ENST00000349496 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
CTNNB1-201ENST00000349496 AAMPQ13685 434 aa16.77■□□□□ 0.27
CTNNB1-201ENST00000349496 IRX6P78412 446 aaPredicted RBP16.76■□□□□ 0.27
CTNNB1-201ENST00000349496 CLIP1P30622 1438 aa16.75■□□□□ 0.27
CTNNB1-201ENST00000349496 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
CTNNB1-201ENST00000349496 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
CTNNB1-201ENST00000349496 KANK4Q5T7N3 995 aaPredicted RBP16.73■□□□□ 0.27
CTNNB1-201ENST00000349496 P3H3Q8IVL6 736 aa16.73■□□□□ 0.27
CTNNB1-201ENST00000349496 NAP1L5Q96NT1 182 aaPredicted RBP16.72■□□□□ 0.27
CTNNB1-201ENST00000349496 PAK3O75914 559 aaPredicted RBP16.71■□□□□ 0.27
CTNNB1-201ENST00000349496 LAS1LQ9Y4W2 734 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-201ENST00000349496 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
CTNNB1-201ENST00000349496 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
CTNNB1-201ENST00000349496 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
CTNNB1-201ENST00000349496 HSP90AA1P07900 732 aaKnown RBP16.65■□□□□ 0.26
CTNNB1-201ENST00000349496 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
CTNNB1-201ENST00000349496 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
CTNNB1-201ENST00000349496 CEP164Q9UPV0 1460 aa16.6■□□□□ 0.25
CTNNB1-201ENST00000349496 EEA1Q15075 1411 aa16.56■□□□□ 0.24
CTNNB1-201ENST00000349496 KCNH8Q96L42 1107 aa16.53■□□□□ 0.24
CTNNB1-201ENST00000349496 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
CTNNB1-201ENST00000349496 BBXQ8WY36 941 aaPredicted RBP16.52■□□□□ 0.23
CTNNB1-201ENST00000349496 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
CTNNB1-201ENST00000349496 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
CTNNB1-201ENST00000349496 IPO9Q96P70 1041 aaKnown RBP16.48■□□□□ 0.23
CTNNB1-201ENST00000349496 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
CTNNB1-201ENST00000349496 KIF21BO75037 1637 aa16.48■□□□□ 0.23
CTNNB1-201ENST00000349496 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
CTNNB1-201ENST00000349496 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
CTNNB1-201ENST00000349496 RRP9O43818 475 aaKnown RBP16.46■□□□□ 0.23
CTNNB1-201ENST00000349496 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
CTNNB1-201ENST00000349496 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
CTNNB1-201ENST00000349496 ARID3CA6NKF2 412 aa16.44■□□□□ 0.22
CTNNB1-201ENST00000349496 FAM50AQ14320 339 aaKnown RBP16.44■□□□□ 0.22
CTNNB1-201ENST00000349496 GSE1Q14687 1217 aa16.43■□□□□ 0.22
CTNNB1-201ENST00000349496 ZNF326Q5BKZ1 582 aaKnown RBP16.43■□□□□ 0.22
CTNNB1-201ENST00000349496 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
CTNNB1-201ENST00000349496 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
CTNNB1-201ENST00000349496 CUX1P39880 1505 aa16.43■□□□□ 0.22
CTNNB1-201ENST00000349496 PNNQ9H307 717 aaKnown RBP16.42■□□□□ 0.22
CTNNB1-201ENST00000349496 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
CTNNB1-201ENST00000349496 RGS3P49796 1198 aa16.42■□□□□ 0.22
CTNNB1-201ENST00000349496 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
CTNNB1-201ENST00000349496 ARXQ96QS3 562 aa16.42■□□□□ 0.22
CTNNB1-201ENST00000349496 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-201ENST00000349496 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-201ENST00000349496 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-201ENST00000349496 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
CTNNB1-201ENST00000349496 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
CTNNB1-201ENST00000349496 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
CTNNB1-201ENST00000349496 CUX2O14529 1486 aa16.37■□□□□ 0.21
CTNNB1-201ENST00000349496 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
CTNNB1-201ENST00000349496 KIF27Q86VH2 1401 aa16.34■□□□□ 0.21
CTNNB1-201ENST00000349496 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
CTNNB1-201ENST00000349496 TOP2BQ02880 1626 aa16.34■□□□□ 0.21
CTNNB1-201ENST00000349496 PRXQ9BXM0 1461 aa16.31■□□□□ 0.2
CTNNB1-201ENST00000349496 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
CTNNB1-201ENST00000349496 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
CTNNB1-201ENST00000349496 IGF1RP08069 1367 aa16.29■□□□□ 0.2
CTNNB1-201ENST00000349496 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
CTNNB1-201ENST00000349496 FRAT1Q92837 279 aaPredicted RBP16.28■□□□□ 0.2
CTNNB1-201ENST00000349496 NESP48681 1621 aa16.28■□□□□ 0.2
CTNNB1-201ENST00000349496 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
CTNNB1-201ENST00000349496 DDX10Q13206 875 aaKnown RBP16.28■□□□□ 0.2
CTNNB1-201ENST00000349496 ARID3AQ99856 593 aa16.27■□□□□ 0.2
CTNNB1-201ENST00000349496 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.2
CTNNB1-201ENST00000349496 ARHGAP35Q9NRY4 1499 aa16.26■□□□□ 0.19
CTNNB1-201ENST00000349496 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
CTNNB1-201ENST00000349496 CDK11BP21127 795 aaKnown RBP16.25■□□□□ 0.19
CTNNB1-201ENST00000349496 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
CTNNB1-201ENST00000349496 CHMP4AQ9BY43 222 aa16.24■□□□□ 0.19
CTNNB1-201ENST00000349496 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
CTNNB1-201ENST00000349496 CFTRP13569 1480 aa16.23■□□□□ 0.19
CTNNB1-201ENST00000349496 WASHC2CQ9Y4E1 1318 aa16.23■□□□□ 0.19
CTNNB1-201ENST00000349496 ANP32CO43423 234 aa16.23■□□□□ 0.19
CTNNB1-201ENST00000349496 BRD2P25440 801 aaKnown RBP16.21■□□□□ 0.19
CTNNB1-201ENST00000349496 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.18
CTNNB1-201ENST00000349496 CCNB3Q8WWL7 1395 aa16.2■□□□□ 0.18
CTNNB1-201ENST00000349496 TNNT2P45379 298 aaPredicted RBP16.2■□□□□ 0.18
CTNNB1-201ENST00000349496 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
CTNNB1-201ENST00000349496 FHOD3Q2V2M9 1422 aa16.19■□□□□ 0.18
CTNNB1-201ENST00000349496 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
CTNNB1-201ENST00000349496 RAB3GAP2Q9H2M9 1393 aa16.17■□□□□ 0.18
CTNNB1-201ENST00000349496 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
CTNNB1-201ENST00000349496 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms