RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
EPB41-203ENST00000349460 CFAP43Q8NDM7 1665 aa16.63■□□□□ 0.25
EPB41-203ENST00000349460 FYCO1Q9BQS8 1478 aa16.6■□□□□ 0.25
EPB41-203ENST00000349460 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.25
EPB41-203ENST00000349460 ERCC6Q03468 1493 aa16.58■□□□□ 0.24
EPB41-203ENST00000349460 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
EPB41-203ENST00000349460 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
EPB41-203ENST00000349460 EIF4G3O43432 1585 aaKnown RBP16.57■□□□□ 0.24
EPB41-203ENST00000349460 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
EPB41-203ENST00000349460 FMN1Q68DA7 1419 aa16.55■□□□□ 0.24
EPB41-203ENST00000349460 APLP2Q06481 763 aa16.54■□□□□ 0.24
EPB41-203ENST00000349460 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
EPB41-203ENST00000349460 IQGAP2Q13576 1575 aa16.52■□□□□ 0.24
EPB41-203ENST00000349460 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.24
EPB41-203ENST00000349460 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
EPB41-203ENST00000349460 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
EPB41-203ENST00000349460 KIAA0586Q9BVV6 1533 aa16.47■□□□□ 0.23
EPB41-203ENST00000349460 ZNF608Q9ULD9 1512 aaPredicted RBP16.47■□□□□ 0.23
EPB41-203ENST00000349460 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
EPB41-203ENST00000349460 SYNJ2O15056 1496 aa16.45■□□□□ 0.22
EPB41-203ENST00000349460 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
EPB41-203ENST00000349460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.43■□□□□ 0.225e-11■□□□□ 10.7
EPB41-203ENST00000349460 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
EPB41-203ENST00000349460 NUP160Q12769 1436 aa16.4■□□□□ 0.22
EPB41-203ENST00000349460 HECW1Q76N89 1606 aa16.39■□□□□ 0.21
EPB41-203ENST00000349460 FHOD3Q2V2M9 1422 aa16.39■□□□□ 0.21
EPB41-203ENST00000349460 KIAA0556O60303 1618 aa16.37■□□□□ 0.21
EPB41-203ENST00000349460 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
EPB41-203ENST00000349460 EHBP1L1Q8N3D4 1523 aa16.34■□□□□ 0.21
EPB41-203ENST00000349460 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
EPB41-203ENST00000349460 ARHGEF11O15085 1522 aa16.33■□□□□ 0.2
EPB41-203ENST00000349460 PPARGC1BQ86YN6 1023 aaKnown RBP16.32■□□□□ 0.2
EPB41-203ENST00000349460 DISP1Q96F81 1524 aa16.32■□□□□ 0.2
EPB41-203ENST00000349460 KANK4Q5T7N3 995 aaPredicted RBP16.32■□□□□ 0.2
EPB41-203ENST00000349460 CCNB3Q8WWL7 1395 aa16.31■□□□□ 0.2
EPB41-203ENST00000349460 CLSPNQ9HAW4 1339 aa16.3■□□□□ 0.2
EPB41-203ENST00000349460 SUPT6HQ7KZ85 1726 aaKnown RBP16.29■□□□□ 0.2
EPB41-203ENST00000349460 RANGAP1P46060 587 aaPredicted RBP16.24■□□□□ 0.19
EPB41-203ENST00000349460 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
EPB41-203ENST00000349460 SHROOM2Q13796 1616 aa16.23■□□□□ 0.19
EPB41-203ENST00000349460 EPRSP07814 1512 aaKnown RBP16.22■□□□□ 0.19
EPB41-203ENST00000349460 CARMIL2Q6F5E8 1435 aa16.2■□□□□ 0.18
EPB41-203ENST00000349460 PHLDB1Q86UU1 1377 aa16.2■□□□□ 0.18
EPB41-203ENST00000349460 TCOF1Q13428 1488 aaKnown RBP16.19■□□□□ 0.18
EPB41-203ENST00000349460 ADCY10Q96PN6 1610 aa16.18■□□□□ 0.18
EPB41-203ENST00000349460 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
EPB41-203ENST00000349460 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
EPB41-203ENST00000349460 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
EPB41-203ENST00000349460 NCOA2Q15596 1464 aa16.16■□□□□ 0.18
EPB41-203ENST00000349460 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
EPB41-203ENST00000349460 CHD1O14646 1710 aa16.15■□□□□ 0.18
EPB41-203ENST00000349460 ABCA8O94911 1581 aa16.15■□□□□ 0.18
EPB41-203ENST00000349460 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
EPB41-203ENST00000349460 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
EPB41-203ENST00000349460 MAGI3Q5TCQ9 1506 aa16.14■□□□□ 0.17
EPB41-203ENST00000349460 NUP153P49790 1475 aaKnown RBP16.14■□□□□ 0.17
EPB41-203ENST00000349460 AKNAQ7Z591 1439 aa16.12■□□□□ 0.17
EPB41-203ENST00000349460 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
EPB41-203ENST00000349460 ACIN1Q9UKV3 1341 aaKnown RBP16.11■□□□□ 0.17
EPB41-203ENST00000349460 PTPN23Q9H3S7 1636 aa16.1■□□□□ 0.17
EPB41-203ENST00000349460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.08■□□□□ 0.17
EPB41-203ENST00000349460 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
EPB41-203ENST00000349460 ITSN2Q9NZM3 1697 aa16.07■□□□□ 0.16
EPB41-203ENST00000349460 TTBK1Q5TCY1 1321 aaPredicted RBP16.07■□□□□ 0.16
EPB41-203ENST00000349460 SETD5Q9C0A6 1442 aa16.07■□□□□ 0.16
EPB41-203ENST00000349460 DHX57Q6P158 1386 aaKnown RBP16.06■□□□□ 0.16
EPB41-203ENST00000349460 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
EPB41-203ENST00000349460 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
EPB41-203ENST00000349460 CDK13Q14004 1512 aaKnown RBP16.04■□□□□ 0.16
EPB41-203ENST00000349460 GCC2Q8IWJ2 1684 aa16.04■□□□□ 0.16
EPB41-203ENST00000349460 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
EPB41-203ENST00000349460 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
EPB41-203ENST00000349460 CDK11AQ9UQ88 783 aaPredicted RBP16.02■□□□□ 0.16
EPB41-203ENST00000349460 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
EPB41-203ENST00000349460 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
EPB41-203ENST00000349460 UHRF1BP1LA0JNW5 1464 aa15.98■□□□□ 0.15
EPB41-203ENST00000349460 PRG4Q92954 1404 aaPredicted RBP15.97■□□□□ 0.15
EPB41-203ENST00000349460 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
EPB41-203ENST00000349460 PLB1Q6P1J6 1458 aa15.96■□□□□ 0.15
EPB41-203ENST00000349460 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
EPB41-203ENST00000349460 KIF14Q15058 1648 aa15.95■□□□□ 0.14
EPB41-203ENST00000349460 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
EPB41-203ENST00000349460 MAPKBP1O60336 1514 aa15.93■□□□□ 0.14
EPB41-203ENST00000349460 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
EPB41-203ENST00000349460 ATP10BO94823 1461 aa15.93■□□□□ 0.14
EPB41-203ENST00000349460 ABCC10Q5T3U5 1492 aa15.93■□□□□ 0.14
EPB41-203ENST00000349460 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
EPB41-203ENST00000349460 ABCC2Q92887 1545 aa15.92■□□□□ 0.14
EPB41-203ENST00000349460 PTPRGP23470 1445 aa15.91■□□□□ 0.14
EPB41-203ENST00000349460 ADGBQ8N7X0 1667 aa15.91■□□□□ 0.14
EPB41-203ENST00000349460 NAIPQ13075 1403 aa15.91■□□□□ 0.14
EPB41-203ENST00000349460 UACAQ9BZF9 1416 aa15.91■□□□□ 0.14
EPB41-203ENST00000349460 PTPRKQ15262 1439 aa15.9■□□□□ 0.14
EPB41-203ENST00000349460 ADGRL2O95490 1459 aa15.89■□□□□ 0.13
EPB41-203ENST00000349460 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
EPB41-203ENST00000349460 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
EPB41-203ENST00000349460 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
EPB41-203ENST00000349460 FBLN2P98095 1184 aa15.87■□□□□ 0.13
EPB41-203ENST00000349460 FAM50AQ14320 339 aaKnown RBP15.87■□□□□ 0.13
EPB41-203ENST00000349460 ARHGEF5Q12774 1597 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms