RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
PUF60-202ENST00000349157 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
PUF60-202ENST00000349157 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
PUF60-202ENST00000349157 AQRO60306 1485 aaKnown RBP eCLIP29.71■■■□□ 2.358e-7■■■■■ 58
PUF60-202ENST00000349157 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
PUF60-202ENST00000349157 TTBK1Q5TCY1 1321 aaPredicted RBP29.66■■■□□ 2.34
PUF60-202ENST00000349157 FMN1Q68DA7 1419 aa29.65■■■□□ 2.34
PUF60-202ENST00000349157 SAMD9Q5K651 1589 aa29.63■■■□□ 2.33
PUF60-202ENST00000349157 FYCO1Q9BQS8 1478 aa29.62■■■□□ 2.33
PUF60-202ENST00000349157 TIAM1Q13009 1591 aa29.62■■■□□ 2.33
PUF60-202ENST00000349157 CASKIN1Q8WXD9 1431 aa29.59■■■□□ 2.33
PUF60-202ENST00000349157 ZNF608Q9ULD9 1512 aaPredicted RBP29.54■■■□□ 2.32
PUF60-202ENST00000349157 CFAP43Q8NDM7 1665 aa29.54■■■□□ 2.32
PUF60-202ENST00000349157 EIF4G3O43432 1585 aaKnown RBP29.53■■■□□ 2.32
PUF60-202ENST00000349157 FHOD3Q2V2M9 1422 aa29.53■■■□□ 2.32
PUF60-202ENST00000349157 RRBP1Q9P2E9 1410 aaKnown RBP29.53■■■□□ 2.32
PUF60-202ENST00000349157 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
PUF60-202ENST00000349157 KANK4Q5T7N3 995 aaPredicted RBP29.52■■■□□ 2.32
PUF60-202ENST00000349157 PCF11O94913 1555 aaKnown RBP29.52■■■□□ 2.32
PUF60-202ENST00000349157 IQGAP2Q13576 1575 aa29.51■■■□□ 2.31
PUF60-202ENST00000349157 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
PUF60-202ENST00000349157 CCER1Q8TC90 406 aaPredicted RBP29.47■■■□□ 2.31
PUF60-202ENST00000349157 SNAPC4Q5SXM2 1469 aa29.44■■■□□ 2.3
PUF60-202ENST00000349157 KIAA0586Q9BVV6 1533 aa29.42■■■□□ 2.3
PUF60-202ENST00000349157 UGGT2Q9NYU1 1516 aa29.41■■■□□ 2.3
PUF60-202ENST00000349157 P3H3Q8IVL6 736 aa29.4■■■□□ 2.3
PUF60-202ENST00000349157 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
PUF60-202ENST00000349157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.37■■■□□ 2.29
PUF60-202ENST00000349157 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
PUF60-202ENST00000349157 CCNB3Q8WWL7 1395 aa29.37■■■□□ 2.29
PUF60-202ENST00000349157 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
PUF60-202ENST00000349157 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
PUF60-202ENST00000349157 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.24■■■□□ 2.271e-6■■■□□ 17.2
PUF60-202ENST00000349157 HECW1Q76N89 1606 aa29.24■■■□□ 2.27
PUF60-202ENST00000349157 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
PUF60-202ENST00000349157 ATP1B4Q9UN42 357 aaPredicted RBP29.22■■■□□ 2.27
PUF60-202ENST00000349157 NUP160Q12769 1436 aa29.19■■■□□ 2.26
PUF60-202ENST00000349157 KIAA0556O60303 1618 aa29.18■■■□□ 2.26
PUF60-202ENST00000349157 CLSPNQ9HAW4 1339 aa29.18■■■□□ 2.26
PUF60-202ENST00000349157 EHBP1L1Q8N3D4 1523 aa29.17■■■□□ 2.26
PUF60-202ENST00000349157 MTUS2Q5JR59 1369 aa29.16■■■□□ 2.26
PUF60-202ENST00000349157 PHLDB1Q86UU1 1377 aa29.15■■■□□ 2.26
PUF60-202ENST00000349157 DISP1Q96F81 1524 aa29.12■■■□□ 2.25
PUF60-202ENST00000349157 CEP170Q5SW79 1584 aa29.11■■■□□ 2.25
PUF60-202ENST00000349157 SUPT6HQ7KZ85 1726 aaKnown RBP29.08■■■□□ 2.25
PUF60-202ENST00000349157 LRRIQ1Q96JM4 1722 aa29.08■■■□□ 2.25
PUF60-202ENST00000349157 CARMIL2Q6F5E8 1435 aa29.07■■■□□ 2.24
PUF60-202ENST00000349157 EPRSP07814 1512 aaKnown RBP29.05■■■□□ 2.24
PUF60-202ENST00000349157 FGD6Q6ZV73 1430 aa29■■■□□ 2.23
PUF60-202ENST00000349157 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
PUF60-202ENST00000349157 NCOA2Q15596 1464 aa28.99■■■□□ 2.23
PUF60-202ENST00000349157 MYOM3Q5VTT5 1437 aa28.97■■■□□ 2.23
PUF60-202ENST00000349157 RAPGEF6Q8TEU7 1601 aa28.96■■■□□ 2.23
PUF60-202ENST00000349157 FBLN2P98095 1184 aa28.96■■■□□ 2.23
PUF60-202ENST00000349157 JPH4Q96JJ6 628 aa28.94■■■□□ 2.22
PUF60-202ENST00000349157 CDK11AQ9UQ88 783 aaPredicted RBP28.92■■■□□ 2.22
PUF60-202ENST00000349157 DHX57Q6P158 1386 aaKnown RBP28.91■■■□□ 2.22
PUF60-202ENST00000349157 SETD5Q9C0A6 1442 aa28.91■■■□□ 2.22
PUF60-202ENST00000349157 FAM50AQ14320 339 aaKnown RBP28.91■■■□□ 2.22
PUF60-202ENST00000349157 MIA2Q96PC5 1412 aa28.87■■■□□ 2.21
PUF60-202ENST00000349157 NUP153P49790 1475 aaKnown RBP28.86■■■□□ 2.21
PUF60-202ENST00000349157 MAGI3Q5TCQ9 1506 aa28.86■■■□□ 2.21
PUF60-202ENST00000349157 TCOF1Q13428 1488 aaKnown RBP28.83■■■□□ 2.21
PUF60-202ENST00000349157 CDK13Q14004 1512 aaKnown RBP28.83■■■□□ 2.21
PUF60-202ENST00000349157 RAB3GAP2Q9H2M9 1393 aa28.82■■■□□ 2.2
PUF60-202ENST00000349157 ITGAEP38570 1179 aa28.8■■■□□ 2.2
PUF60-202ENST00000349157 PTPN23Q9H3S7 1636 aa28.78■■■□□ 2.2
PUF60-202ENST00000349157 CHD1O14646 1710 aa28.77■■■□□ 2.2
PUF60-202ENST00000349157 ABCA8O94911 1581 aa28.74■■■□□ 2.19
PUF60-202ENST00000349157 ACIN1Q9UKV3 1341 aaKnown RBP28.72■■■□□ 2.19
PUF60-202ENST00000349157 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
PUF60-202ENST00000349157 TROQ12816 1431 aaPredicted RBP28.72■■■□□ 2.19
PUF60-202ENST00000349157 HFM1A2PYH4 1435 aa28.7■■■□□ 2.19
PUF60-202ENST00000349157 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
PUF60-202ENST00000349157 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
PUF60-202ENST00000349157 PLB1Q6P1J6 1458 aa28.69■■■□□ 2.18
PUF60-202ENST00000349157 ADCY10Q96PN6 1610 aa28.67■■■□□ 2.18
PUF60-202ENST00000349157 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
PUF60-202ENST00000349157 PTPRGP23470 1445 aa28.63■■■□□ 2.17
PUF60-202ENST00000349157 ITSN2Q9NZM3 1697 aa28.6■■■□□ 2.17
PUF60-202ENST00000349157 PTPRKQ15262 1439 aa28.55■■■□□ 2.16
PUF60-202ENST00000349157 TIMELESSQ9UNS1 1208 aa28.55■■■□□ 2.16
PUF60-202ENST00000349157 PLEKHD1A6NEE1 506 aa28.55■■■□□ 2.16
PUF60-202ENST00000349157 ZNF316A6NFI3 1004 aaPredicted RBP28.55■■■□□ 2.16
PUF60-202ENST00000349157 NAIPQ13075 1403 aa28.54■■■□□ 2.16
PUF60-202ENST00000349157 MAPKBP1O60336 1514 aa28.53■■■□□ 2.16
PUF60-202ENST00000349157 ATP10BO94823 1461 aa28.52■■■□□ 2.16
PUF60-202ENST00000349157 CLASP1Q7Z460 1538 aa28.52■■■□□ 2.16
PUF60-202ENST00000349157 UACAQ9BZF9 1416 aa28.52■■■□□ 2.16
PUF60-202ENST00000349157 GCC2Q8IWJ2 1684 aa28.51■■■□□ 2.16
PUF60-202ENST00000349157 ROCK1Q13464 1354 aa28.51■■■□□ 2.15
PUF60-202ENST00000349157 KIF14Q15058 1648 aa28.49■■■□□ 2.15
PUF60-202ENST00000349157 ARID3CA6NKF2 412 aa28.49■■■□□ 2.15
PUF60-202ENST00000349157 DNMT1P26358 1616 aaKnown RBP28.48■■■□□ 2.15
PUF60-202ENST00000349157 GPATCH8Q9UKJ3 1502 aaKnown RBP28.45■■■□□ 2.15
PUF60-202ENST00000349157 DAPK1P53355 1430 aa28.44■■■□□ 2.14
PUF60-202ENST00000349157 CFDP1Q9UEE9 299 aaPredicted RBP28.41■■■□□ 2.14
PUF60-202ENST00000349157 ABCC10Q5T3U5 1492 aa28.39■■■□□ 2.14
PUF60-202ENST00000349157 ABCC2Q92887 1545 aa28.39■■■□□ 2.13
PUF60-202ENST00000349157 CAMSAP2Q08AD1 1489 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms