RNA–Protein interactions for RNA: ENST00000348370.8

RNF111-201, Transcript of ring finger protein 111, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF111, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-201ENST00000348370 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
RNF111-201ENST00000348370 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
RNF111-201ENST00000348370 TMC1Q8TDI8 760 aa17.1■□□□□ 0.33
RNF111-201ENST00000348370 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
RNF111-201ENST00000348370 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
RNF111-201ENST00000348370 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
RNF111-201ENST00000348370 NAP1L5Q96NT1 182 aaPredicted RBP17.04■□□□□ 0.32
RNF111-201ENST00000348370 SOGA1O94964 1423 aa17.03■□□□□ 0.32
RNF111-201ENST00000348370 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
RNF111-201ENST00000348370 CEP164Q9UPV0 1460 aa17.02■□□□□ 0.32
RNF111-201ENST00000348370 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.32
RNF111-201ENST00000348370 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
RNF111-201ENST00000348370 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
RNF111-201ENST00000348370 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
RNF111-201ENST00000348370 ARID3CA6NKF2 412 aa16.95■□□□□ 0.3
RNF111-201ENST00000348370 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
RNF111-201ENST00000348370 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
RNF111-201ENST00000348370 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
RNF111-201ENST00000348370 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
RNF111-201ENST00000348370 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
RNF111-201ENST00000348370 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
RNF111-201ENST00000348370 BECN1Q14457 450 aa16.9■□□□□ 0.3
RNF111-201ENST00000348370 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
RNF111-201ENST00000348370 TRIM44Q96DX7 344 aaPredicted RBP16.89■□□□□ 0.29
RNF111-201ENST00000348370 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
RNF111-201ENST00000348370 DHX57Q6P158 1386 aaKnown RBP16.88■□□□□ 0.29
RNF111-201ENST00000348370 RRP7BPQ9NSQ0 103 aa16.83■□□□□ 0.29
RNF111-201ENST00000348370 KANK4Q5T7N3 995 aaPredicted RBP16.83■□□□□ 0.28
RNF111-201ENST00000348370 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
RNF111-201ENST00000348370 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
RNF111-201ENST00000348370 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
RNF111-201ENST00000348370 RGS3P49796 1198 aa16.79■□□□□ 0.28
RNF111-201ENST00000348370 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
RNF111-201ENST00000348370 ZNF777Q9ULD5 760 aaPredicted RBP16.78■□□□□ 0.28
RNF111-201ENST00000348370 HSPA5P11021 654 aaKnown RBP16.77■□□□□ 0.28
RNF111-201ENST00000348370 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.28
RNF111-201ENST00000348370 TIMELESSQ9UNS1 1208 aa16.76■□□□□ 0.27
RNF111-201ENST00000348370 ARID4BQ4LE39 1312 aaPredicted RBP16.76■□□□□ 0.27
RNF111-201ENST00000348370 KDM2AQ9Y2K7 1162 aa16.75■□□□□ 0.27
RNF111-201ENST00000348370 MSH5O43196 834 aa16.75■□□□□ 0.27
RNF111-201ENST00000348370 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
RNF111-201ENST00000348370 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
RNF111-201ENST00000348370 IL27Q8NEV9 243 aa16.71■□□□□ 0.27
RNF111-201ENST00000348370 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
RNF111-201ENST00000348370 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
RNF111-201ENST00000348370 USP35Q9P2H5 1018 aa16.7■□□□□ 0.26
RNF111-201ENST00000348370 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
RNF111-201ENST00000348370 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
RNF111-201ENST00000348370 GSE1Q14687 1217 aa16.68■□□□□ 0.26
RNF111-201ENST00000348370 WIZO95785 1651 aa16.67■□□□□ 0.26
RNF111-201ENST00000348370 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
RNF111-201ENST00000348370 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
RNF111-201ENST00000348370 VSIG10Q8N0Z9 540 aa16.64■□□□□ 0.25
RNF111-201ENST00000348370 PNNQ9H307 717 aaKnown RBP16.64■□□□□ 0.25
RNF111-201ENST00000348370 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
RNF111-201ENST00000348370 TNNT2P45379 298 aaPredicted RBP16.63■□□□□ 0.25
RNF111-201ENST00000348370 PAK3O75914 559 aaPredicted RBP16.62■□□□□ 0.25
RNF111-201ENST00000348370 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
RNF111-201ENST00000348370 SLC4A3P48751 1232 aa16.61■□□□□ 0.25
RNF111-201ENST00000348370 RCAN3Q9UKA8 241 aa16.6■□□□□ 0.25
RNF111-201ENST00000348370 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
RNF111-201ENST00000348370 PDE4AP27815 886 aa16.6■□□□□ 0.25
RNF111-201ENST00000348370 GZF1Q9H116 711 aaPredicted RBP16.6■□□□□ 0.25
RNF111-201ENST00000348370 GOLGA6L22H0YM25 854 aa16.59■□□□□ 0.25
RNF111-201ENST00000348370 HSP90AA2PQ14568 343 aaPredicted RBP16.58■□□□□ 0.25
RNF111-201ENST00000348370 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
RNF111-201ENST00000348370 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
RNF111-201ENST00000348370 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
RNF111-201ENST00000348370 DNTTIP2Q5QJE6 756 aaKnown RBP16.55■□□□□ 0.24
RNF111-201ENST00000348370 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
RNF111-201ENST00000348370 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
RNF111-201ENST00000348370 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
RNF111-201ENST00000348370 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
RNF111-201ENST00000348370 ARID3AQ99856 593 aa16.54■□□□□ 0.24
RNF111-201ENST00000348370 GOLGA6L3A6NEY3 463 aa16.53■□□□□ 0.24
RNF111-201ENST00000348370 ARHGAP35Q9NRY4 1499 aa16.52■□□□□ 0.24
RNF111-201ENST00000348370 MSNP26038 577 aaKnown RBP16.52■□□□□ 0.23
RNF111-201ENST00000348370 RAPGEF2Q9Y4G8 1499 aa16.52■□□□□ 0.23
RNF111-201ENST00000348370 PKNOX2Q96KN3 472 aa16.5■□□□□ 0.23
RNF111-201ENST00000348370 EXOC6Q8TAG9 804 aa16.5■□□□□ 0.23
RNF111-201ENST00000348370 FOXD1Q16676 465 aa16.49■□□□□ 0.23
RNF111-201ENST00000348370 HSP90AB1P08238 724 aaKnown RBP16.48■□□□□ 0.23
RNF111-201ENST00000348370 FRAT1Q92837 279 aaPredicted RBP16.47■□□□□ 0.23
RNF111-201ENST00000348370 HSCBQ8IWL3 235 aa16.46■□□□□ 0.23
RNF111-201ENST00000348370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.22
RNF111-201ENST00000348370 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
RNF111-201ENST00000348370 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
RNF111-201ENST00000348370 NFKBIBQ15653 356 aa16.44■□□□□ 0.22
RNF111-201ENST00000348370 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
RNF111-201ENST00000348370 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
RNF111-201ENST00000348370 NACADO15069 1562 aa16.42■□□□□ 0.22
RNF111-201ENST00000348370 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
RNF111-201ENST00000348370 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
RNF111-201ENST00000348370 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
RNF111-201ENST00000348370 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
RNF111-201ENST00000348370 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
RNF111-201ENST00000348370 PLIN1O60240 522 aa16.4■□□□□ 0.22
RNF111-201ENST00000348370 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
RNF111-201ENST00000348370 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
RNF111-201ENST00000348370 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms