RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
SMG7-201ENST00000347615 B4GALNT3Q6L9W6 998 aa14.14□□□□□ -0.15
SMG7-201ENST00000347615 KCNH8Q96L42 1107 aa14.14□□□□□ -0.15
SMG7-201ENST00000347615 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
SMG7-201ENST00000347615 WRNQ14191 1432 aaPredicted RBP eCLIP14.12□□□□□ -0.15
SMG7-201ENST00000347615 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.155e-7■■□□□ 11.4
SMG7-201ENST00000347615 KANK4Q5T7N3 995 aaPredicted RBP14.12□□□□□ -0.15
SMG7-201ENST00000347615 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
SMG7-201ENST00000347615 LAS1LQ9Y4W2 734 aaKnown RBP14.09□□□□□ -0.15
SMG7-201ENST00000347615 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
SMG7-201ENST00000347615 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
SMG7-201ENST00000347615 FOXD1Q16676 465 aa14.05□□□□□ -0.16
SMG7-201ENST00000347615 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
SMG7-201ENST00000347615 HSP90AA1P07900 732 aaKnown RBP14.03□□□□□ -0.16
SMG7-201ENST00000347615 WDR43Q15061 677 aaKnown RBP eCLIP14.02□□□□□ -0.17
SMG7-201ENST00000347615 TSHZ2Q9NRE2 1034 aa14□□□□□ -0.17
SMG7-201ENST00000347615 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
SMG7-201ENST00000347615 MROH2BQ7Z745 1585 aa13.99□□□□□ -0.17
SMG7-201ENST00000347615 NEFMP07197 916 aa13.97□□□□□ -0.17
SMG7-201ENST00000347615 NEUROD2Q15784 382 aa13.96□□□□□ -0.18
SMG7-201ENST00000347615 CC2D1BQ5T0F9 858 aaKnown RBP13.95□□□□□ -0.18
SMG7-201ENST00000347615 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
SMG7-201ENST00000347615 EEA1Q15075 1411 aa13.94□□□□□ -0.18
SMG7-201ENST00000347615 RGS3P49796 1198 aa13.94□□□□□ -0.18
SMG7-201ENST00000347615 TSPY4P0CV99 314 aa13.94□□□□□ -0.18
SMG7-201ENST00000347615 TSPY10P0CW01 314 aa13.94□□□□□ -0.18
SMG7-201ENST00000347615 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
SMG7-201ENST00000347615 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
SMG7-201ENST00000347615 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
SMG7-201ENST00000347615 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
SMG7-201ENST00000347615 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
SMG7-201ENST00000347615 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
SMG7-201ENST00000347615 RUSC2Q8N2Y8 1516 aa13.9□□□□□ -0.18
SMG7-201ENST00000347615 TPRNQ4KMQ1 711 aa13.9□□□□□ -0.18
SMG7-201ENST00000347615 BAZ1BQ9UIG0 1483 aaKnown RBP13.9□□□□□ -0.18
SMG7-201ENST00000347615 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
SMG7-201ENST00000347615 WIZO95785 1651 aa13.89□□□□□ -0.19
SMG7-201ENST00000347615 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
SMG7-201ENST00000347615 DEKP35659 375 aaKnown RBP13.88□□□□□ -0.19
SMG7-201ENST00000347615 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
SMG7-201ENST00000347615 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
SMG7-201ENST00000347615 KIF27Q86VH2 1401 aa13.87□□□□□ -0.19
SMG7-201ENST00000347615 RAB3GAP2Q9H2M9 1393 aa13.87□□□□□ -0.19
SMG7-201ENST00000347615 VPS8Q8N3P4 1428 aa13.84□□□□□ -0.19
SMG7-201ENST00000347615 SPRYD3Q8NCJ5 442 aa13.84□□□□□ -0.19
SMG7-201ENST00000347615 CFDP1Q9UEE9 299 aaPredicted RBP13.84□□□□□ -0.19
SMG7-201ENST00000347615 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
SMG7-201ENST00000347615 ANP32BQ92688 251 aaKnown RBP13.81□□□□□ -0.2
SMG7-201ENST00000347615 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
SMG7-201ENST00000347615 PPM1GO15355 546 aaPredicted RBP13.8□□□□□ -0.2
SMG7-201ENST00000347615 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
SMG7-201ENST00000347615 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
SMG7-201ENST00000347615 CUX2O14529 1486 aa13.77□□□□□ -0.2
SMG7-201ENST00000347615 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
SMG7-201ENST00000347615 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.77□□□□□ -0.21
SMG7-201ENST00000347615 CARMIL1Q5VZK9 1371 aa13.75□□□□□ -0.21
SMG7-201ENST00000347615 RAPGEF2Q9Y4G8 1499 aa13.75□□□□□ -0.21
SMG7-201ENST00000347615 DDRGK1Q96HY6 314 aa13.75□□□□□ -0.21
SMG7-201ENST00000347615 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
SMG7-201ENST00000347615 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
SMG7-201ENST00000347615 PLEKHD1A6NEE1 506 aa13.74□□□□□ -0.21
SMG7-201ENST00000347615 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
SMG7-201ENST00000347615 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
SMG7-201ENST00000347615 NACADO15069 1562 aa13.74□□□□□ -0.21
SMG7-201ENST00000347615 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
SMG7-201ENST00000347615 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
SMG7-201ENST00000347615 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
SMG7-201ENST00000347615 BECN1Q14457 450 aa13.69□□□□□ -0.22
SMG7-201ENST00000347615 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMG7-201ENST00000347615 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
SMG7-201ENST00000347615 PKD2Q13563 968 aa13.68□□□□□ -0.22
SMG7-201ENST00000347615 L3MBTL2Q969R5 705 aa13.67□□□□□ -0.22
SMG7-201ENST00000347615 MPHOSPH9Q99550 1183 aa13.67□□□□□ -0.22
SMG7-201ENST00000347615 ESF1Q9H501 851 aaKnown RBP13.67□□□□□ -0.22
SMG7-201ENST00000347615 ARHGAP35Q9NRY4 1499 aa13.66□□□□□ -0.22
SMG7-201ENST00000347615 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
SMG7-201ENST00000347615 NAP1L5Q96NT1 182 aaPredicted RBP13.66□□□□□ -0.22
SMG7-201ENST00000347615 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
SMG7-201ENST00000347615 PLIN1O60240 522 aa13.64□□□□□ -0.23
SMG7-201ENST00000347615 U2SURPO15042 1029 aaKnown RBP13.64□□□□□ -0.23
SMG7-201ENST00000347615 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
SMG7-201ENST00000347615 SLKQ9H2G2 1235 aaPredicted RBP13.63□□□□□ -0.23
SMG7-201ENST00000347615 GZF1Q9H116 711 aaPredicted RBP13.63□□□□□ -0.23
SMG7-201ENST00000347615 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
SMG7-201ENST00000347615 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
SMG7-201ENST00000347615 RCAN3Q9UKA8 241 aa13.62□□□□□ -0.23
SMG7-201ENST00000347615 NPM1P06748 294 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMG7-201ENST00000347615 CCDC146Q8IYE0 955 aa13.61□□□□□ -0.23
SMG7-201ENST00000347615 TAOK2Q9UL54 1235 aa13.61□□□□□ -0.23
SMG7-201ENST00000347615 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
SMG7-201ENST00000347615 GLIPR1L2Q4G1C9 344 aa13.6□□□□□ -0.23
SMG7-201ENST00000347615 TDRD9Q8NDG6 1382 aaKnown RBP13.6□□□□□ -0.23
SMG7-201ENST00000347615 SOX12O15370 315 aa13.59□□□□□ -0.23
SMG7-201ENST00000347615 APBB1O00213 710 aa13.56□□□□□ -0.24
SMG7-201ENST00000347615 ARID3AQ99856 593 aa13.56□□□□□ -0.24
SMG7-201ENST00000347615 TMF1P82094 1093 aa13.55□□□□□ -0.24
SMG7-201ENST00000347615 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
SMG7-201ENST00000347615 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
SMG7-201ENST00000347615 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
SMG7-201ENST00000347615 IPO9Q96P70 1041 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms