RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 HAP1P54257 671 aaPredicted RBP10.34□□□□□ -0.75
LIN28B-201ENST00000345080 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 NEFMP07197 916 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 C14orf37Q86TY3 774 aa10.34□□□□□ -0.75
LIN28B-201ENST00000345080 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
LIN28B-201ENST00000345080 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
LIN28B-201ENST00000345080 ARID3AQ99856 593 aa10.31□□□□□ -0.76
LIN28B-201ENST00000345080 PKNOX2Q96KN3 472 aa10.3□□□□□ -0.76
LIN28B-201ENST00000345080 RBM19Q9Y4C8 960 aaKnown RBP10.3□□□□□ -0.76
LIN28B-201ENST00000345080 MIER1Q8N108 512 aa10.29□□□□□ -0.76
LIN28B-201ENST00000345080 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
LIN28B-201ENST00000345080 HSP90AA1P07900 732 aaKnown RBP10.28□□□□□ -0.76
LIN28B-201ENST00000345080 TNIKQ9UKE5 1360 aa10.27□□□□□ -0.77
LIN28B-201ENST00000345080 UBE2Q2Q8WVN8 375 aa10.27□□□□□ -0.77
LIN28B-201ENST00000345080 TNNT3P45378 269 aaPredicted RBP10.26□□□□□ -0.77
LIN28B-201ENST00000345080 FANCIQ9NVI1 1328 aa10.26□□□□□ -0.77
LIN28B-201ENST00000345080 HDGFP51858 240 aaKnown RBP10.26□□□□□ -0.77
LIN28B-201ENST00000345080 PPP1R15AO75807 674 aaPredicted RBP10.25□□□□□ -0.77
LIN28B-201ENST00000345080 CECR2Q9BXF3 1484 aa10.25□□□□□ -0.77
LIN28B-201ENST00000345080 ITGAEP38570 1179 aa10.24□□□□□ -0.77
LIN28B-201ENST00000345080 BAZ1BQ9UIG0 1483 aaKnown RBP10.24□□□□□ -0.77
LIN28B-201ENST00000345080 DNTTIP2Q5QJE6 756 aaKnown RBP10.24□□□□□ -0.77
LIN28B-201ENST00000345080 USP35Q9P2H5 1018 aa10.23□□□□□ -0.77
LIN28B-201ENST00000345080 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
LIN28B-201ENST00000345080 L1TD1Q5T7N2 865 aaKnown RBP10.22□□□□□ -0.77
LIN28B-201ENST00000345080 CEP162Q5TB80 1403 aa10.21□□□□□ -0.77
LIN28B-201ENST00000345080 CALRP27797 417 aaKnown RBP10.21□□□□□ -0.78
LIN28B-201ENST00000345080 TRIM52Q96A61 297 aa10.2□□□□□ -0.78
LIN28B-201ENST00000345080 ZNF777Q9ULD5 760 aaPredicted RBP10.2□□□□□ -0.78
LIN28B-201ENST00000345080 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
LIN28B-201ENST00000345080 APPP05067 770 aa10.19□□□□□ -0.78
LIN28B-201ENST00000345080 PPP4R2Q9NY27 417 aa10.18□□□□□ -0.78
LIN28B-201ENST00000345080 CHGAP10645 457 aaKnown RBP10.17□□□□□ -0.78
LIN28B-201ENST00000345080 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
LIN28B-201ENST00000345080 CLIP1P30622 1438 aa10.16□□□□□ -0.78
LIN28B-201ENST00000345080 A0A0G2JS52 829 aa10.15□□□□□ -0.79
LIN28B-201ENST00000345080 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
LIN28B-201ENST00000345080 FAM50AQ14320 339 aaKnown RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 LAS1LQ9Y4W2 734 aaKnown RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PLEKHD1A6NEE1 506 aa10.13□□□□□ -0.79
LIN28B-201ENST00000345080 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PHF23Q9BUL5 403 aaPredicted RBP10.13□□□□□ -0.79
LIN28B-201ENST00000345080 PTMAP06454 111 aaKnown RBP10.12□□□□□ -0.79
LIN28B-201ENST00000345080 HSP90AA2PQ14568 343 aaPredicted RBP10.12□□□□□ -0.79
LIN28B-201ENST00000345080 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
LIN28B-201ENST00000345080 BECN1Q14457 450 aa10.11□□□□□ -0.79
LIN28B-201ENST00000345080 CANXP27824 592 aaKnown RBP10.11□□□□□ -0.79
LIN28B-201ENST00000345080 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
LIN28B-201ENST00000345080 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 TSPY4P0CV99 314 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 TSPY10P0CW01 314 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 PTMSP20962 102 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■■□ 21.1
LIN28B-201ENST00000345080 TONSLQ96HA7 1378 aa10.09□□□□□ -0.79
LIN28B-201ENST00000345080 MEX3CQ5U5Q3 659 aaKnown RBP10.08□□□□□ -0.8
LIN28B-201ENST00000345080 HNRNPUQ00839 825 aaKnown RBP eCLIP10.08□□□□□ -0.8
LIN28B-201ENST00000345080 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
LIN28B-201ENST00000345080 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
LIN28B-201ENST00000345080 CARMIL2Q6F5E8 1435 aa10.07□□□□□ -0.8
LIN28B-201ENST00000345080 PNNQ9H307 717 aaKnown RBP10.07□□□□□ -0.8
LIN28B-201ENST00000345080 ARID3CA6NKF2 412 aa10.06□□□□□ -0.8
LIN28B-201ENST00000345080 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
LIN28B-201ENST00000345080 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
LIN28B-201ENST00000345080 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
LIN28B-201ENST00000345080 PDE4CQ08493 712 aa10.02□□□□□ -0.81
LIN28B-201ENST00000345080 VPS8Q8N3P4 1428 aa10.01□□□□□ -0.81
LIN28B-201ENST00000345080 KANK1Q14678 1352 aa9.99□□□□□ -0.81
LIN28B-201ENST00000345080 MAP7D2Q96T17 732 aa9.99□□□□□ -0.81
LIN28B-201ENST00000345080 TPRNQ4KMQ1 711 aa9.98□□□□□ -0.81
LIN28B-201ENST00000345080 TOP2AP11388 1531 aaKnown RBP9.98□□□□□ -0.81
LIN28B-201ENST00000345080 P3H3Q8IVL6 736 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 PLCB2Q00722 1185 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 NPHP1O15259 732 aa9.97□□□□□ -0.81
LIN28B-201ENST00000345080 RRP9O43818 475 aaKnown RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 MTERF4Q7Z6M4 381 aaKnown RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.96□□□□□ -0.81
LIN28B-201ENST00000345080 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.81
LIN28B-201ENST00000345080 GOLGA6L22H0YM25 854 aa9.96□□□□□ -0.82
LIN28B-201ENST00000345080 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.82
LIN28B-201ENST00000345080 MSNP26038 577 aaKnown RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 SF3B2Q13435 895 aaKnown RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 CYB5RLQ6IPT4 315 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
LIN28B-201ENST00000345080 GSE1Q14687 1217 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 EID1Q9Y6B2 187 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
LIN28B-201ENST00000345080 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
LIN28B-201ENST00000345080 EIF4G2P78344 907 aaKnown RBP eCLIP9.94□□□□□ -0.82
LIN28B-201ENST00000345080 DDX10Q13206 875 aaKnown RBP9.94□□□□□ -0.82
LIN28B-201ENST00000345080 FHAD1B1AJZ9 1412 aa9.93□□□□□ -0.82
LIN28B-201ENST00000345080 TCERG1O14776 1098 aaKnown RBP9.93□□□□□ -0.82
LIN28B-201ENST00000345080 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
LIN28B-201ENST00000345080 TPM2P07951 284 aa9.92□□□□□ -0.82
LIN28B-201ENST00000345080 HMGB2P26583 209 aaKnown RBP9.92□□□□□ -0.82
LIN28B-201ENST00000345080 MLECQ14165 292 aa9.91□□□□□ -0.82
LIN28B-201ENST00000345080 CCNB3Q8WWL7 1395 aa9.91□□□□□ -0.82
LIN28B-201ENST00000345080 CHAF1AQ13111 956 aaPredicted RBP9.91□□□□□ -0.82
LIN28B-201ENST00000345080 MAPK8IP2Q13387 824 aaPredicted RBP9.9□□□□□ -0.82
LIN28B-201ENST00000345080 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
LIN28B-201ENST00000345080 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms