RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 IGF1RP08069 1367 aa21.55■■□□□ 1.04
SGCA-202ENST00000344627 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
SGCA-202ENST00000344627 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
SGCA-202ENST00000344627 CUL7Q14999 1698 aa21.52■■□□□ 1.04
SGCA-202ENST00000344627 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
SGCA-202ENST00000344627 MAPKBP1O60336 1514 aa21.44■■□□□ 1.02
SGCA-202ENST00000344627 ABCC10Q5T3U5 1492 aa21.42■■□□□ 1.02
SGCA-202ENST00000344627 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
SGCA-202ENST00000344627 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
SGCA-202ENST00000344627 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
SGCA-202ENST00000344627 PTPRGP23470 1445 aa21.34■■□□□ 1.01
SGCA-202ENST00000344627 KIF13AQ9H1H9 1805 aa21.33■■□□□ 1.01
SGCA-202ENST00000344627 TNIKQ9UKE5 1360 aa21.33■■□□□ 1
SGCA-202ENST00000344627 ADCY10Q96PN6 1610 aa21.32■■□□□ 1
SGCA-202ENST00000344627 DIP2BQ9P265 1576 aa21.28■■□□□ 1
SGCA-202ENST00000344627 IQGAP2Q13576 1575 aa21.25■□□□□ 0.99
SGCA-202ENST00000344627 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
SGCA-202ENST00000344627 ABCC2Q92887 1545 aa21.23■□□□□ 0.99
SGCA-202ENST00000344627 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
SGCA-202ENST00000344627 PLB1Q6P1J6 1458 aa21.21■□□□□ 0.99
SGCA-202ENST00000344627 UACAQ9BZF9 1416 aa21.18■□□□□ 0.98
SGCA-202ENST00000344627 UGGT2Q9NYU1 1516 aa21.16■□□□□ 0.98
SGCA-202ENST00000344627 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
SGCA-202ENST00000344627 DISP1Q96F81 1524 aa21.14■□□□□ 0.97
SGCA-202ENST00000344627 GLI2P10070 1586 aa21.13■□□□□ 0.97
SGCA-202ENST00000344627 ASXL2Q76L83 1435 aa21.12■□□□□ 0.97
SGCA-202ENST00000344627 KDM6BO15054 1643 aa21.12■□□□□ 0.97
SGCA-202ENST00000344627 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
SGCA-202ENST00000344627 GOLGA3Q08378 1498 aa21.07■□□□□ 0.96
SGCA-202ENST00000344627 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
SGCA-202ENST00000344627 KIAA0556O60303 1618 aa21.04■□□□□ 0.96
SGCA-202ENST00000344627 TEX14Q8IWB6 1497 aa21.01■□□□□ 0.95
SGCA-202ENST00000344627 EPRSP07814 1512 aaKnown RBP21■□□□□ 0.95
SGCA-202ENST00000344627 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
SGCA-202ENST00000344627 TSPOAP1O95153 1857 aa20.96■□□□□ 0.95
SGCA-202ENST00000344627 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
SGCA-202ENST00000344627 KDM4FA0A1W2PPD8 638 aa20.93■□□□□ 0.94
SGCA-202ENST00000344627 ZCCHC11Q5TAX3 1644 aaKnown RBP20.93■□□□□ 0.94
SGCA-202ENST00000344627 CTTNBP2Q8WZ74 1663 aa20.93■□□□□ 0.94
SGCA-202ENST00000344627 MAP3K4Q9Y6R4 1608 aa20.92■□□□□ 0.94
SGCA-202ENST00000344627 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.94
SGCA-202ENST00000344627 ABCA8O94911 1581 aa20.87■□□□□ 0.93
SGCA-202ENST00000344627 MAGI3Q5TCQ9 1506 aa20.85■□□□□ 0.93
SGCA-202ENST00000344627 CSRNP3Q8WYN3 585 aa20.83■□□□□ 0.93
SGCA-202ENST00000344627 EEA1Q15075 1411 aa20.83■□□□□ 0.93
SGCA-202ENST00000344627 CD109Q6YHK3 1445 aa20.83■□□□□ 0.93
SGCA-202ENST00000344627 COL17A1Q9UMD9 1497 aaPredicted RBP20.81■□□□□ 0.92
SGCA-202ENST00000344627 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
SGCA-202ENST00000344627 CFAP43Q8NDM7 1665 aa20.79■□□□□ 0.92
SGCA-202ENST00000344627 KCNH8Q96L42 1107 aa20.75■□□□□ 0.91
SGCA-202ENST00000344627 ADGRL1O94910 1474 aa20.75■□□□□ 0.91
SGCA-202ENST00000344627 P3H3Q8IVL6 736 aa20.74■□□□□ 0.91
SGCA-202ENST00000344627 ATP10BO94823 1461 aa20.7■□□□□ 0.9
SGCA-202ENST00000344627 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
SGCA-202ENST00000344627 ARAP3Q8WWN8 1544 aa20.68■□□□□ 0.9
SGCA-202ENST00000344627 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
SGCA-202ENST00000344627 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
SGCA-202ENST00000344627 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
SGCA-202ENST00000344627 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
SGCA-202ENST00000344627 RAPGEF6Q8TEU7 1601 aa20.61■□□□□ 0.89
SGCA-202ENST00000344627 NEO1Q92859 1461 aa20.61■□□□□ 0.89
SGCA-202ENST00000344627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
SGCA-202ENST00000344627 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
SGCA-202ENST00000344627 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
SGCA-202ENST00000344627 PLEKHD1A6NEE1 506 aa20.57■□□□□ 0.88
SGCA-202ENST00000344627 EFCAB5A4FU69 1503 aa20.57■□□□□ 0.88
SGCA-202ENST00000344627 NUP153P49790 1475 aaKnown RBP20.54■□□□□ 0.88
SGCA-202ENST00000344627 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
SGCA-202ENST00000344627 KIF21BO75037 1637 aa20.52■□□□□ 0.88
SGCA-202ENST00000344627 FHOD3Q2V2M9 1422 aa20.49■□□□□ 0.87
SGCA-202ENST00000344627 HECW2Q9P2P5 1572 aa20.45■□□□□ 0.86
SGCA-202ENST00000344627 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
SGCA-202ENST00000344627 CFAP74Q9C0B2 1584 aa20.43■□□□□ 0.86
SGCA-202ENST00000344627 DENND4BO75064 1496 aaPredicted RBP20.43■□□□□ 0.86
SGCA-202ENST00000344627 FMN1Q68DA7 1419 aa20.42■□□□□ 0.86
SGCA-202ENST00000344627 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
SGCA-202ENST00000344627 FANCAO15360 1455 aa20.4■□□□□ 0.86
SGCA-202ENST00000344627 AKNAQ7Z591 1439 aa20.4■□□□□ 0.86
SGCA-202ENST00000344627 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
SGCA-202ENST00000344627 ATP1B4Q9UN42 357 aaPredicted RBP20.38■□□□□ 0.85
SGCA-202ENST00000344627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.37■□□□□ 0.85
SGCA-202ENST00000344627 PTPRMP28827 1452 aa20.36■□□□□ 0.85
SGCA-202ENST00000344627 POGZQ7Z3K3 1410 aa20.36■□□□□ 0.85
SGCA-202ENST00000344627 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
SGCA-202ENST00000344627 ARID4BQ4LE39 1312 aaPredicted RBP20.35■□□□□ 0.85
SGCA-202ENST00000344627 FRMPD1Q5SYB0 1578 aa20.34■□□□□ 0.85
SGCA-202ENST00000344627 ILDR1Q86SU0 546 aaPredicted RBP20.34■□□□□ 0.85
SGCA-202ENST00000344627 PLCH2O75038 1416 aa20.34■□□□□ 0.85
SGCA-202ENST00000344627 ZMYM4Q5VZL5 1548 aa20.32■□□□□ 0.84
SGCA-202ENST00000344627 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
SGCA-202ENST00000344627 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
SGCA-202ENST00000344627 BCORL1Q5H9F3 1711 aa20.3■□□□□ 0.84
SGCA-202ENST00000344627 EFCAB2Q5VUJ9 269 aa20.29■□□□□ 0.84
SGCA-202ENST00000344627 RICTORQ6R327 1708 aa20.29■□□□□ 0.84
SGCA-202ENST00000344627 TTC37Q6PGP7 1564 aa20.26■□□□□ 0.83
SGCA-202ENST00000344627 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
SGCA-202ENST00000344627 CDK13Q14004 1512 aaKnown RBP20.26■□□□□ 0.83
SGCA-202ENST00000344627 CLIP1P30622 1438 aa20.26■□□□□ 0.83
SGCA-202ENST00000344627 ZFYVE16Q7Z3T8 1539 aa20.25■□□□□ 0.83
SGCA-202ENST00000344627 SCAPERQ9BY12 1400 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms