RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
HERPUD1-202ENST00000344114 ABCC10Q5T3U5 1492 aa23.02■■□□□ 1.28
HERPUD1-202ENST00000344114 MAPKBP1O60336 1514 aa23.02■■□□□ 1.28
HERPUD1-202ENST00000344114 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
HERPUD1-202ENST00000344114 ADCY10Q96PN6 1610 aa22.98■■□□□ 1.27
HERPUD1-202ENST00000344114 FAM69CQ0P6D2 419 aa22.94■■□□□ 1.26
HERPUD1-202ENST00000344114 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
HERPUD1-202ENST00000344114 KIAA0586Q9BVV6 1533 aa22.89■■□□□ 1.26
HERPUD1-202ENST00000344114 CUL7Q14999 1698 aa22.87■■□□□ 1.25
HERPUD1-202ENST00000344114 KDM6BO15054 1643 aa22.85■■□□□ 1.25
HERPUD1-202ENST00000344114 IGF1RP08069 1367 aa22.82■■□□□ 1.24
HERPUD1-202ENST00000344114 TSPOAP1O95153 1857 aa22.81■■□□□ 1.24
HERPUD1-202ENST00000344114 KIF27Q86VH2 1401 aa22.78■■□□□ 1.24
HERPUD1-202ENST00000344114 KDM4FA0A1W2PPD8 638 aa22.74■■□□□ 1.23
HERPUD1-202ENST00000344114 PTPRGP23470 1445 aa22.71■■□□□ 1.23
HERPUD1-202ENST00000344114 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
HERPUD1-202ENST00000344114 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
HERPUD1-202ENST00000344114 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
HERPUD1-202ENST00000344114 TNIKQ9UKE5 1360 aa22.67■■□□□ 1.22
HERPUD1-202ENST00000344114 GLI2P10070 1586 aa22.66■■□□□ 1.22
HERPUD1-202ENST00000344114 CARMIL1Q5VZK9 1371 aa22.66■■□□□ 1.22
HERPUD1-202ENST00000344114 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.22
HERPUD1-202ENST00000344114 IQGAP2Q13576 1575 aa22.64■■□□□ 1.21
HERPUD1-202ENST00000344114 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
HERPUD1-202ENST00000344114 UHRF1BP1LA0JNW5 1464 aa22.62■■□□□ 1.21
HERPUD1-202ENST00000344114 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
HERPUD1-202ENST00000344114 DISP1Q96F81 1524 aa22.56■■□□□ 1.2
HERPUD1-202ENST00000344114 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
HERPUD1-202ENST00000344114 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
HERPUD1-202ENST00000344114 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
HERPUD1-202ENST00000344114 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
HERPUD1-202ENST00000344114 EPRSP07814 1512 aaKnown RBP22.51■■□□□ 1.19
HERPUD1-202ENST00000344114 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
HERPUD1-202ENST00000344114 ADGRL1O94910 1474 aa22.49■■□□□ 1.19
HERPUD1-202ENST00000344114 ZCCHC11Q5TAX3 1644 aaKnown RBP22.49■■□□□ 1.19
HERPUD1-202ENST00000344114 COL17A1Q9UMD9 1497 aaPredicted RBP22.48■■□□□ 1.19
HERPUD1-202ENST00000344114 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
HERPUD1-202ENST00000344114 TEX14Q8IWB6 1497 aa22.44■■□□□ 1.18
HERPUD1-202ENST00000344114 RAPGEF2Q9Y4G8 1499 aa22.43■■□□□ 1.18
HERPUD1-202ENST00000344114 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
HERPUD1-202ENST00000344114 WDR7Q9Y4E6 1490 aa22.36■■□□□ 1.17
HERPUD1-202ENST00000344114 CTTNBP2Q8WZ74 1663 aa22.35■■□□□ 1.17
HERPUD1-202ENST00000344114 HECW2Q9P2P5 1572 aa22.32■■□□□ 1.16
HERPUD1-202ENST00000344114 CFAP43Q8NDM7 1665 aa22.31■■□□□ 1.16
HERPUD1-202ENST00000344114 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
HERPUD1-202ENST00000344114 ABCA8O94911 1581 aa22.28■■□□□ 1.16
HERPUD1-202ENST00000344114 GOLGA3Q08378 1498 aa22.24■■□□□ 1.15
HERPUD1-202ENST00000344114 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
HERPUD1-202ENST00000344114 KIF21BO75037 1637 aa22.15■■□□□ 1.14
HERPUD1-202ENST00000344114 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
HERPUD1-202ENST00000344114 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
HERPUD1-202ENST00000344114 ARAP3Q8WWN8 1544 aa22.12■■□□□ 1.13
HERPUD1-202ENST00000344114 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
HERPUD1-202ENST00000344114 ATP10BO94823 1461 aa22.05■■□□□ 1.12
HERPUD1-202ENST00000344114 ADAMTSL3P82987 1691 aa22.02■■□□□ 1.12
HERPUD1-202ENST00000344114 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
HERPUD1-202ENST00000344114 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
HERPUD1-202ENST00000344114 RAPGEF6Q8TEU7 1601 aa21.96■■□□□ 1.11
HERPUD1-202ENST00000344114 PTPRMP28827 1452 aa21.95■■□□□ 1.11
HERPUD1-202ENST00000344114 NEO1Q92859 1461 aa21.95■■□□□ 1.11
HERPUD1-202ENST00000344114 FRMPD1Q5SYB0 1578 aa21.94■■□□□ 1.1
HERPUD1-202ENST00000344114 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
HERPUD1-202ENST00000344114 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
HERPUD1-202ENST00000344114 BCORL1Q5H9F3 1711 aa21.94■■□□□ 1.1
HERPUD1-202ENST00000344114 P3H3Q8IVL6 736 aa21.92■■□□□ 1.1
HERPUD1-202ENST00000344114 RAPGEF3O95398 923 aa21.88■■□□□ 1.09
HERPUD1-202ENST00000344114 FBXO41Q8TF61 875 aa21.88■■□□□ 1.09
HERPUD1-202ENST00000344114 EEA1Q15075 1411 aa21.88■■□□□ 1.09
HERPUD1-202ENST00000344114 MADDQ8WXG6 1647 aa21.88■■□□□ 1.09
HERPUD1-202ENST00000344114 NUP153P49790 1475 aaKnown RBP21.86■■□□□ 1.09
HERPUD1-202ENST00000344114 PCF11O94913 1555 aaKnown RBP21.84■■□□□ 1.09
HERPUD1-202ENST00000344114 RICTORQ6R327 1708 aa21.84■■□□□ 1.09
HERPUD1-202ENST00000344114 ARHGEF40Q8TER5 1519 aa21.83■■□□□ 1.09
HERPUD1-202ENST00000344114 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
HERPUD1-202ENST00000344114 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
HERPUD1-202ENST00000344114 RIMS1Q86UR5 1692 aaKnown RBP21.79■■□□□ 1.08
HERPUD1-202ENST00000344114 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
HERPUD1-202ENST00000344114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
HERPUD1-202ENST00000344114 HNRNPUL2Q1KMD3 747 aaKnown RBP21.77■■□□□ 1.08
HERPUD1-202ENST00000344114 DENND4BO75064 1496 aaPredicted RBP21.77■■□□□ 1.08
HERPUD1-202ENST00000344114 FHOD3Q2V2M9 1422 aa21.75■■□□□ 1.07
HERPUD1-202ENST00000344114 ARID4BQ4LE39 1312 aaPredicted RBP21.75■■□□□ 1.07
HERPUD1-202ENST00000344114 AKNAQ7Z591 1439 aa21.75■■□□□ 1.07
HERPUD1-202ENST00000344114 ZMYM4Q5VZL5 1548 aa21.74■■□□□ 1.07
HERPUD1-202ENST00000344114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.076e-6■■■■□ 21.5
HERPUD1-202ENST00000344114 FANCAO15360 1455 aa21.72■■□□□ 1.07
HERPUD1-202ENST00000344114 SIGLEC1Q9BZZ2 1709 aa21.72■■□□□ 1.07
HERPUD1-202ENST00000344114 TTC37Q6PGP7 1564 aa21.71■■□□□ 1.07
HERPUD1-202ENST00000344114 LOC105371045A0A1W2PR82 267 aa21.71■■□□□ 1.07
HERPUD1-202ENST00000344114 PLEKHD1A6NEE1 506 aa21.7■■□□□ 1.06
HERPUD1-202ENST00000344114 EFCAB5A4FU69 1503 aa21.68■■□□□ 1.06
HERPUD1-202ENST00000344114 ZFYVE16Q7Z3T8 1539 aa21.67■■□□□ 1.06
HERPUD1-202ENST00000344114 MAGI2Q86UL8 1455 aa21.66■■□□□ 1.06
HERPUD1-202ENST00000344114 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
HERPUD1-202ENST00000344114 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
HERPUD1-202ENST00000344114 HECW1Q76N89 1606 aa21.64■■□□□ 1.05
HERPUD1-202ENST00000344114 FER1L4A9Z1Z3 1794 aa21.63■■□□□ 1.05
HERPUD1-202ENST00000344114 RANGAP1P46060 587 aaPredicted RBP21.61■■□□□ 1.05
HERPUD1-202ENST00000344114 CDK13Q14004 1512 aaKnown RBP21.6■■□□□ 1.05
HERPUD1-202ENST00000344114 HSPA2P54652 639 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms