RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
PRDM2-203ENST00000343137 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
PRDM2-203ENST00000343137 SOGA1O94964 1423 aa11.22□□□□□ -0.61
PRDM2-203ENST00000343137 CCDC88BA6NC98 1476 aa11.22□□□□□ -0.61
PRDM2-203ENST00000343137 TOP2AP11388 1531 aaKnown RBP11.21□□□□□ -0.61
PRDM2-203ENST00000343137 DDRGK1Q96HY6 314 aa11.21□□□□□ -0.61
PRDM2-203ENST00000343137 RRP7BPQ9NSQ0 103 aa11.21□□□□□ -0.61
PRDM2-203ENST00000343137 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
PRDM2-203ENST00000343137 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
PRDM2-203ENST00000343137 CCER2I3L3R5 266 aa11.18□□□□□ -0.62
PRDM2-203ENST00000343137 CHMP7Q8WUX9 453 aaPredicted RBP11.18□□□□□ -0.62
PRDM2-203ENST00000343137 HSP90AA1P07900 732 aaKnown RBP11.17□□□□□ -0.62
PRDM2-203ENST00000343137 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
PRDM2-203ENST00000343137 HIRIP3Q9BW71 556 aaPredicted RBP11.16□□□□□ -0.62
PRDM2-203ENST00000343137 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
PRDM2-203ENST00000343137 CDCA8Q53HL2 280 aa11.16□□□□□ -0.62
PRDM2-203ENST00000343137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
PRDM2-203ENST00000343137 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
PRDM2-203ENST00000343137 PLEKHD1A6NEE1 506 aa11.16□□□□□ -0.62
PRDM2-203ENST00000343137 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRDM2-203ENST00000343137 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.62
PRDM2-203ENST00000343137 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.62
PRDM2-203ENST00000343137 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
PRDM2-203ENST00000343137 SUPT16HQ9Y5B9 1047 aaKnown RBP11.14□□□□□ -0.63
PRDM2-203ENST00000343137 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
PRDM2-203ENST00000343137 IRX6P78412 446 aaPredicted RBP11.13□□□□□ -0.63
PRDM2-203ENST00000343137 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
PRDM2-203ENST00000343137 NBR1Q14596 966 aa11.13□□□□□ -0.63
PRDM2-203ENST00000343137 CUX2O14529 1486 aa11.13□□□□□ -0.63
PRDM2-203ENST00000343137 BECN1Q14457 450 aa11.12□□□□□ -0.63
PRDM2-203ENST00000343137 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
PRDM2-203ENST00000343137 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
PRDM2-203ENST00000343137 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
PRDM2-203ENST00000343137 WIZO95785 1651 aa11.11□□□□□ -0.63
PRDM2-203ENST00000343137 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
PRDM2-203ENST00000343137 ERICH6BQ5W0A0 696 aa11.11□□□□□ -0.63
PRDM2-203ENST00000343137 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
PRDM2-203ENST00000343137 GLIPR1L2Q4G1C9 344 aa11.09□□□□□ -0.63
PRDM2-203ENST00000343137 PPM1GO15355 546 aaPredicted RBP11.09□□□□□ -0.63
PRDM2-203ENST00000343137 EIF5BO60841 1220 aaKnown RBP11.08□□□□□ -0.64
PRDM2-203ENST00000343137 CARD11Q9BXL7 1154 aa11.08□□□□□ -0.64
PRDM2-203ENST00000343137 BCL11AQ9H165 835 aa11.07□□□□□ -0.64
PRDM2-203ENST00000343137 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
PRDM2-203ENST00000343137 KNSTRNQ9Y448 316 aa11.06□□□□□ -0.64
PRDM2-203ENST00000343137 FMN1Q68DA7 1419 aa11.06□□□□□ -0.64
PRDM2-203ENST00000343137 CFAP53Q96M91 514 aa11.05□□□□□ -0.64
PRDM2-203ENST00000343137 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
PRDM2-203ENST00000343137 SMARCA4P51532 1647 aa11.02□□□□□ -0.64
PRDM2-203ENST00000343137 NOP58Q9Y2X3 529 aaKnown RBP11.01□□□□□ -0.65
PRDM2-203ENST00000343137 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
PRDM2-203ENST00000343137 EIF4G1Q04637 1599 aaKnown RBP11□□□□□ -0.65
PRDM2-203ENST00000343137 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
PRDM2-203ENST00000343137 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
PRDM2-203ENST00000343137 GOLGA6L22H0YM25 854 aa10.98□□□□□ -0.65
PRDM2-203ENST00000343137 MS4A1P11836 297 aa10.98□□□□□ -0.65
PRDM2-203ENST00000343137 HSPA5P11021 654 aaKnown RBP10.98□□□□□ -0.65
PRDM2-203ENST00000343137 TMF1P82094 1093 aa10.97□□□□□ -0.65
PRDM2-203ENST00000343137 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
PRDM2-203ENST00000343137 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
PRDM2-203ENST00000343137 KCNH8Q96L42 1107 aa10.94□□□□□ -0.66
PRDM2-203ENST00000343137 NUDCQ9Y266 331 aa10.94□□□□□ -0.66
PRDM2-203ENST00000343137 RBM19Q9Y4C8 960 aaKnown RBP10.93□□□□□ -0.66
PRDM2-203ENST00000343137 DHX57Q6P158 1386 aaKnown RBP10.93□□□□□ -0.66
PRDM2-203ENST00000343137 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
PRDM2-203ENST00000343137 FTSJ3Q8IY81 847 aaKnown RBP10.93□□□□□ -0.66
PRDM2-203ENST00000343137 RALBP1Q15311 655 aa10.92□□□□□ -0.66
PRDM2-203ENST00000343137 TRIM44Q96DX7 344 aaPredicted RBP10.92□□□□□ -0.66
PRDM2-203ENST00000343137 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
PRDM2-203ENST00000343137 PNNQ9H307 717 aaKnown RBP10.92□□□□□ -0.66
PRDM2-203ENST00000343137 KANK1Q14678 1352 aa10.92□□□□□ -0.66
PRDM2-203ENST00000343137 KTN1Q86UP2 1357 aaKnown RBP10.92□□□□□ -0.66
PRDM2-203ENST00000343137 NCLP19338 710 aaKnown RBP10.92□□□□□ -0.66
PRDM2-203ENST00000343137 CASC1Q6TDU7 716 aa10.92□□□□□ -0.66
PRDM2-203ENST00000343137 B4GALNT3Q6L9W6 998 aa10.92□□□□□ -0.66
PRDM2-203ENST00000343137 CARMIL2Q6F5E8 1435 aa10.91□□□□□ -0.66
PRDM2-203ENST00000343137 MAPK8IP3Q9UPT6 1336 aa10.91□□□□□ -0.66
PRDM2-203ENST00000343137 MPHOSPH9Q99550 1183 aa10.9□□□□□ -0.66
PRDM2-203ENST00000343137 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.66
PRDM2-203ENST00000343137 ERCC6Q03468 1493 aa10.9□□□□□ -0.66
PRDM2-203ENST00000343137 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
PRDM2-203ENST00000343137 ARID4BQ4LE39 1312 aaPredicted RBP10.9□□□□□ -0.67
PRDM2-203ENST00000343137 ANKRD30AQ9BXX3 1397 aa10.89□□□□□ -0.67
PRDM2-203ENST00000343137 CADPSQ9ULU8 1353 aa10.89□□□□□ -0.67
PRDM2-203ENST00000343137 CCDC18Q5T9S5 1454 aa10.88□□□□□ -0.67
PRDM2-203ENST00000343137 CC2D1BQ5T0F9 858 aaKnown RBP10.88□□□□□ -0.67
PRDM2-203ENST00000343137 TCERG1O14776 1098 aaKnown RBP10.87□□□□□ -0.67
PRDM2-203ENST00000343137 PKD2Q13563 968 aa10.87□□□□□ -0.67
PRDM2-203ENST00000343137 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
PRDM2-203ENST00000343137 ARXQ96QS3 562 aa10.86□□□□□ -0.67
PRDM2-203ENST00000343137 TSHZ2Q9NRE2 1034 aa10.85□□□□□ -0.67
PRDM2-203ENST00000343137 FHOD3Q2V2M9 1422 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 PDE3BQ13370 1112 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 RUSC2Q8N2Y8 1516 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 KIF21BO75037 1637 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 RGS3P49796 1198 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
PRDM2-203ENST00000343137 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
PRDM2-203ENST00000343137 RCAN3Q9UKA8 241 aa10.83□□□□□ -0.68
PRDM2-203ENST00000343137 L1TD1Q5T7N2 865 aaKnown RBP10.82□□□□□ -0.68
PRDM2-203ENST00000343137 RSPH4AQ5TD94 716 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms