RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
FRMD4A-202ENST00000342409 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
FRMD4A-202ENST00000342409 EFCAB5A4FU69 1503 aa26.91■■□□□ 1.9
FRMD4A-202ENST00000342409 PCGF6Q9BYE7 350 aa26.91■■□□□ 1.9
FRMD4A-202ENST00000342409 GRIN2AQ12879 1464 aa26.9■■□□□ 1.9
FRMD4A-202ENST00000342409 TRIM26Q12899 539 aaPredicted RBP26.9■■□□□ 1.9
FRMD4A-202ENST00000342409 SAMD9Q5K651 1589 aa26.9■■□□□ 1.9
FRMD4A-202ENST00000342409 SYNJ2O15056 1496 aa26.87■■□□□ 1.89
FRMD4A-202ENST00000342409 IQGAP2Q13576 1575 aa26.86■■□□□ 1.89
FRMD4A-202ENST00000342409 FHOD3Q2V2M9 1422 aa26.8■■□□□ 1.88
FRMD4A-202ENST00000342409 CEP170Q5SW79 1584 aa26.8■■□□□ 1.88
FRMD4A-202ENST00000342409 P3H3Q8IVL6 736 aa26.76■■□□□ 1.87
FRMD4A-202ENST00000342409 KIAA0586Q9BVV6 1533 aa26.75■■□□□ 1.87
FRMD4A-202ENST00000342409 PCF11O94913 1555 aaKnown RBP26.75■■□□□ 1.87
FRMD4A-202ENST00000342409 CHD1O14646 1710 aa26.74■■□□□ 1.87
FRMD4A-202ENST00000342409 UGGT2Q9NYU1 1516 aa26.73■■□□□ 1.87
FRMD4A-202ENST00000342409 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
FRMD4A-202ENST00000342409 NUP160Q12769 1436 aa26.71■■□□□ 1.87
FRMD4A-202ENST00000342409 TTBK1Q5TCY1 1321 aaPredicted RBP26.69■■□□□ 1.86
FRMD4A-202ENST00000342409 CFAP43Q8NDM7 1665 aa26.64■■□□□ 1.86
FRMD4A-202ENST00000342409 FBLN2P98095 1184 aa26.64■■□□□ 1.85
FRMD4A-202ENST00000342409 LRRIQ1Q96JM4 1722 aa26.64■■□□□ 1.85
FRMD4A-202ENST00000342409 TIAM1Q13009 1591 aa26.63■■□□□ 1.85
FRMD4A-202ENST00000342409 APLP2Q06481 763 aa26.62■■□□□ 1.85
FRMD4A-202ENST00000342409 MAP3K1Q13233 1512 aa26.62■■□□□ 1.85
FRMD4A-202ENST00000342409 DISP1Q96F81 1524 aa26.62■■□□□ 1.85
FRMD4A-202ENST00000342409 FYCO1Q9BQS8 1478 aa26.62■■□□□ 1.85
FRMD4A-202ENST00000342409 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
FRMD4A-202ENST00000342409 KIAA0556O60303 1618 aa26.61■■□□□ 1.85
FRMD4A-202ENST00000342409 FMN1Q68DA7 1419 aa26.61■■□□□ 1.85
FRMD4A-202ENST00000342409 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
FRMD4A-202ENST00000342409 LRRC9Q6ZRR7 1453 aa26.46■■□□□ 1.83
FRMD4A-202ENST00000342409 JPH4Q96JJ6 628 aa26.43■■□□□ 1.82
FRMD4A-202ENST00000342409 SHROOM2Q13796 1616 aa26.42■■□□□ 1.82
FRMD4A-202ENST00000342409 HECW1Q76N89 1606 aa26.41■■□□□ 1.82
FRMD4A-202ENST00000342409 ATP1B4Q9UN42 357 aaPredicted RBP26.39■■□□□ 1.82
FRMD4A-202ENST00000342409 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
FRMD4A-202ENST00000342409 CLASP1Q7Z460 1538 aa26.36■■□□□ 1.81
FRMD4A-202ENST00000342409 CARMIL2Q6F5E8 1435 aa26.34■■□□□ 1.81
FRMD4A-202ENST00000342409 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
FRMD4A-202ENST00000342409 EPRSP07814 1512 aaKnown RBP26.31■■□□□ 1.8
FRMD4A-202ENST00000342409 PRG4Q92954 1404 aaPredicted RBP26.29■■□□□ 1.8
FRMD4A-202ENST00000342409 MAGI3Q5TCQ9 1506 aa26.29■■□□□ 1.8
FRMD4A-202ENST00000342409 RRBP1Q9P2E9 1410 aaKnown RBP26.29■■□□□ 1.8
FRMD4A-202ENST00000342409 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
FRMD4A-202ENST00000342409 NUP153P49790 1475 aaKnown RBP26.28■■□□□ 1.8
FRMD4A-202ENST00000342409 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
FRMD4A-202ENST00000342409 PLB1Q6P1J6 1458 aa26.24■■□□□ 1.79
FRMD4A-202ENST00000342409 ABCA8O94911 1581 aa26.24■■□□□ 1.79
FRMD4A-202ENST00000342409 PHLDB1Q86UU1 1377 aa26.23■■□□□ 1.79
FRMD4A-202ENST00000342409 EHBP1L1Q8N3D4 1523 aa26.23■■□□□ 1.79
FRMD4A-202ENST00000342409 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.78
FRMD4A-202ENST00000342409 MTUS2Q5JR59 1369 aa26.18■■□□□ 1.78
FRMD4A-202ENST00000342409 HRCP23327 699 aa26.17■■□□□ 1.78
FRMD4A-202ENST00000342409 ARHGEF11O15085 1522 aa26.16■■□□□ 1.78
FRMD4A-202ENST00000342409 CCNB3Q8WWL7 1395 aa26.15■■□□□ 1.78
FRMD4A-202ENST00000342409 NCOA2Q15596 1464 aa26.13■■□□□ 1.77
FRMD4A-202ENST00000342409 ARID3CA6NKF2 412 aa26.11■■□□□ 1.77
FRMD4A-202ENST00000342409 PTPRGP23470 1445 aa26.1■■□□□ 1.77
FRMD4A-202ENST00000342409 HNRNPUL2Q1KMD3 747 aaKnown RBP26.1■■□□□ 1.77
FRMD4A-202ENST00000342409 FGD6Q6ZV73 1430 aa26.02■■□□□ 1.76
FRMD4A-202ENST00000342409 ATP10BO94823 1461 aa26.02■■□□□ 1.76
FRMD4A-202ENST00000342409 ADCY10Q96PN6 1610 aa26■■□□□ 1.75
FRMD4A-202ENST00000342409 MYOM3Q5VTT5 1437 aa26■■□□□ 1.75
FRMD4A-202ENST00000342409 UACAQ9BZF9 1416 aa25.98■■□□□ 1.75
FRMD4A-202ENST00000342409 TROQ12816 1431 aaPredicted RBP25.96■■□□□ 1.75
FRMD4A-202ENST00000342409 KIF14Q15058 1648 aa25.96■■□□□ 1.75
FRMD4A-202ENST00000342409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.96■■□□□ 1.75
FRMD4A-202ENST00000342409 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
FRMD4A-202ENST00000342409 ABCC2Q92887 1545 aa25.95■■□□□ 1.74
FRMD4A-202ENST00000342409 PTPN23Q9H3S7 1636 aa25.95■■□□□ 1.74
FRMD4A-202ENST00000342409 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
FRMD4A-202ENST00000342409 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
FRMD4A-202ENST00000342409 FAM50AQ14320 339 aaKnown RBP25.89■■□□□ 1.74
FRMD4A-202ENST00000342409 TCOF1Q13428 1488 aaKnown RBP25.88■■□□□ 1.73
FRMD4A-202ENST00000342409 UHRF1BP1LA0JNW5 1464 aa25.87■■□□□ 1.73
FRMD4A-202ENST00000342409 ITGAEP38570 1179 aa25.85■■□□□ 1.73
FRMD4A-202ENST00000342409 ZCCHC11Q5TAX3 1644 aaKnown RBP25.84■■□□□ 1.73
FRMD4A-202ENST00000342409 CDC42BPAQ5VT25 1732 aa25.84■■□□□ 1.73
FRMD4A-202ENST00000342409 ITSN2Q9NZM3 1697 aa25.84■■□□□ 1.73
FRMD4A-202ENST00000342409 MIA2Q96PC5 1412 aa25.83■■□□□ 1.73
FRMD4A-202ENST00000342409 ABCC10Q5T3U5 1492 aa25.81■■□□□ 1.72
FRMD4A-202ENST00000342409 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
FRMD4A-202ENST00000342409 CCER1Q8TC90 406 aaPredicted RBP25.8■■□□□ 1.72
FRMD4A-202ENST00000342409 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
FRMD4A-202ENST00000342409 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
FRMD4A-202ENST00000342409 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
FRMD4A-202ENST00000342409 ZEB1P37275 1124 aaPredicted RBP25.73■■□□□ 1.71
FRMD4A-202ENST00000342409 CDC42BPBQ9Y5S2 1711 aa25.7■■□□□ 1.7
FRMD4A-202ENST00000342409 SETD5Q9C0A6 1442 aa25.69■■□□□ 1.7
FRMD4A-202ENST00000342409 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
FRMD4A-202ENST00000342409 RAB3GAP2Q9H2M9 1393 aa25.68■■□□□ 1.7
FRMD4A-202ENST00000342409 TTC37Q6PGP7 1564 aa25.67■■□□□ 1.7
FRMD4A-202ENST00000342409 PREX2Q70Z35 1606 aa25.67■■□□□ 1.7
FRMD4A-202ENST00000342409 ZNF644Q9H582 1327 aaPredicted RBP25.66■■□□□ 1.7
FRMD4A-202ENST00000342409 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
FRMD4A-202ENST00000342409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.65■■□□□ 1.7
FRMD4A-202ENST00000342409 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.7
FRMD4A-202ENST00000342409 GCC2Q8IWJ2 1684 aa25.63■■□□□ 1.69
FRMD4A-202ENST00000342409 CROCC2H7BZ55 1655 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms