RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
RTL6-201ENST00000341255 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.05
RTL6-201ENST00000341255 EEA1Q15075 1411 aa21.58■■□□□ 1.05
RTL6-201ENST00000341255 ANP32EQ9BTT0 268 aa21.56■■□□□ 1.04
RTL6-201ENST00000341255 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
RTL6-201ENST00000341255 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
RTL6-201ENST00000341255 GOLGA3Q08378 1498 aa21.52■■□□□ 1.04
RTL6-201ENST00000341255 CEP162Q5TB80 1403 aa21.49■■□□□ 1.03
RTL6-201ENST00000341255 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
RTL6-201ENST00000341255 DDRGK1Q96HY6 314 aa21.45■■□□□ 1.03
RTL6-201ENST00000341255 RB1CC1Q8TDY2 1594 aa21.45■■□□□ 1.02
RTL6-201ENST00000341255 SUPT16HQ9Y5B9 1047 aaKnown RBP21.45■■□□□ 1.02
RTL6-201ENST00000341255 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
RTL6-201ENST00000341255 KCNH8Q96L42 1107 aa21.4■■□□□ 1.02
RTL6-201ENST00000341255 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.02
RTL6-201ENST00000341255 MYH16Q9H6N6 1097 aa21.39■■□□□ 1.02
RTL6-201ENST00000341255 BECN1Q14457 450 aa21.39■■□□□ 1.01
RTL6-201ENST00000341255 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
RTL6-201ENST00000341255 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
RTL6-201ENST00000341255 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
RTL6-201ENST00000341255 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
RTL6-201ENST00000341255 TNIKQ9UKE5 1360 aa21.33■■□□□ 1.01
RTL6-201ENST00000341255 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
RTL6-201ENST00000341255 CDCA8Q53HL2 280 aa21.31■■□□□ 1
RTL6-201ENST00000341255 TRIM44Q96DX7 344 aaPredicted RBP21.31■■□□□ 1
RTL6-201ENST00000341255 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
RTL6-201ENST00000341255 PPP4R2Q9NY27 417 aa21.27■■□□□ 1
RTL6-201ENST00000341255 CFAP53Q96M91 514 aa21.26■□□□□ 0.99
RTL6-201ENST00000341255 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
RTL6-201ENST00000341255 KNSTRNQ9Y448 316 aa21.25■□□□□ 0.99
RTL6-201ENST00000341255 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
RTL6-201ENST00000341255 LAS1LQ9Y4W2 734 aaKnown RBP21.24■□□□□ 0.99
RTL6-201ENST00000341255 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
RTL6-201ENST00000341255 NACADO15069 1562 aa21.23■□□□□ 0.99
RTL6-201ENST00000341255 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
RTL6-201ENST00000341255 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
RTL6-201ENST00000341255 GOLGA6L22H0YM25 854 aa21.21■□□□□ 0.99
RTL6-201ENST00000341255 SIN3AQ96ST3 1273 aa21.21■□□□□ 0.99
RTL6-201ENST00000341255 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
RTL6-201ENST00000341255 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
RTL6-201ENST00000341255 NCLP19338 710 aaKnown RBP21.17■□□□□ 0.98
RTL6-201ENST00000341255 A0A0G2JS52 829 aa21.15■□□□□ 0.98
RTL6-201ENST00000341255 B4GALNT3Q6L9W6 998 aa21.14■□□□□ 0.98
RTL6-201ENST00000341255 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
RTL6-201ENST00000341255 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
RTL6-201ENST00000341255 RGS3P49796 1198 aa21.11■□□□□ 0.97
RTL6-201ENST00000341255 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 PTMAP06454 111 aaKnown RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
RTL6-201ENST00000341255 FHAD1B1AJZ9 1412 aa21.07■□□□□ 0.96
RTL6-201ENST00000341255 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
RTL6-201ENST00000341255 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
RTL6-201ENST00000341255 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
RTL6-201ENST00000341255 NAP1L5Q96NT1 182 aaPredicted RBP21.05■□□□□ 0.96
RTL6-201ENST00000341255 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
RTL6-201ENST00000341255 CCNB3Q8WWL7 1395 aa21.05■□□□□ 0.96
RTL6-201ENST00000341255 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
RTL6-201ENST00000341255 POGKQ9P215 609 aa21.02■□□□□ 0.96
RTL6-201ENST00000341255 DNTTIP2Q5QJE6 756 aaKnown RBP21.01■□□□□ 0.95
RTL6-201ENST00000341255 TPRNQ4KMQ1 711 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 FRAT1Q92837 279 aaPredicted RBP20.99■□□□□ 0.95
RTL6-201ENST00000341255 DEKP35659 375 aaKnown RBP20.99■□□□□ 0.95
RTL6-201ENST00000341255 CASC1Q6TDU7 716 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 TIMELESSQ9UNS1 1208 aa20.99■□□□□ 0.95
RTL6-201ENST00000341255 HAP1P54257 671 aaPredicted RBP20.98■□□□□ 0.95
RTL6-201ENST00000341255 CARMIL1Q5VZK9 1371 aa20.98■□□□□ 0.95
RTL6-201ENST00000341255 TNNT2P45379 298 aaPredicted RBP20.98■□□□□ 0.95
RTL6-201ENST00000341255 CC2D1BQ5T0F9 858 aaKnown RBP20.96■□□□□ 0.95
RTL6-201ENST00000341255 ERCC6Q03468 1493 aa20.96■□□□□ 0.95
RTL6-201ENST00000341255 CCER2I3L3R5 266 aa20.96■□□□□ 0.95
RTL6-201ENST00000341255 CDK11BP21127 795 aaKnown RBP20.94■□□□□ 0.94
RTL6-201ENST00000341255 TMF1P82094 1093 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 CUX2O14529 1486 aa20.93■□□□□ 0.94
RTL6-201ENST00000341255 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
RTL6-201ENST00000341255 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
RTL6-201ENST00000341255 MS4A1P11836 297 aa20.91■□□□□ 0.94
RTL6-201ENST00000341255 SOGA1O94964 1423 aa20.89■□□□□ 0.94
RTL6-201ENST00000341255 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.94
RTL6-201ENST00000341255 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
RTL6-201ENST00000341255 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
RTL6-201ENST00000341255 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
RTL6-201ENST00000341255 KANK1Q14678 1352 aa20.87■□□□□ 0.93
RTL6-201ENST00000341255 EIF4G1Q04637 1599 aaKnown RBP20.85■□□□□ 0.93
RTL6-201ENST00000341255 LMOD2Q6P5Q4 547 aa20.85■□□□□ 0.93
RTL6-201ENST00000341255 PLCB2Q00722 1185 aa20.85■□□□□ 0.93
RTL6-201ENST00000341255 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.92
RTL6-201ENST00000341255 VPS8Q8N3P4 1428 aa20.82■□□□□ 0.92
RTL6-201ENST00000341255 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
RTL6-201ENST00000341255 TSHZ2Q9NRE2 1034 aa20.8■□□□□ 0.92
RTL6-201ENST00000341255 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
RTL6-201ENST00000341255 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
RTL6-201ENST00000341255 L1TD1Q5T7N2 865 aaKnown RBP20.78■□□□□ 0.92
RTL6-201ENST00000341255 SPRYD3Q8NCJ5 442 aa20.78■□□□□ 0.92
RTL6-201ENST00000341255 HDGFP51858 240 aaKnown RBP20.77■□□□□ 0.92
RTL6-201ENST00000341255 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
RTL6-201ENST00000341255 OS9Q13438 667 aaPredicted RBP20.75■□□□□ 0.91
RTL6-201ENST00000341255 PKD2Q13563 968 aa20.75■□□□□ 0.91
RTL6-201ENST00000341255 MORC1Q86VD1 984 aa20.75■□□□□ 0.91
RTL6-201ENST00000341255 KANK4Q5T7N3 995 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms