RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
NECTIN1-202ENST00000340882 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
NECTIN1-202ENST00000340882 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
NECTIN1-202ENST00000340882 DIP2BQ9P265 1576 aa29.69■■■□□ 2.34
NECTIN1-202ENST00000340882 ADCY10Q96PN6 1610 aa29.67■■■□□ 2.34
NECTIN1-202ENST00000340882 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
NECTIN1-202ENST00000340882 KDM4FA0A1W2PPD8 638 aa29.61■■■□□ 2.33
NECTIN1-202ENST00000340882 TSPOAP1O95153 1857 aa29.61■■■□□ 2.33
NECTIN1-202ENST00000340882 NPM1P06748 294 aaKnown RBP eCLIP29.59■■■□□ 2.33
NECTIN1-202ENST00000340882 KDM6BO15054 1643 aa29.57■■■□□ 2.32
NECTIN1-202ENST00000340882 KIAA0586Q9BVV6 1533 aa29.43■■■□□ 2.3
NECTIN1-202ENST00000340882 IGF1RP08069 1367 aa29.35■■■□□ 2.29
NECTIN1-202ENST00000340882 ILDR1Q86SU0 546 aaPredicted RBP29.34■■■□□ 2.29
NECTIN1-202ENST00000340882 PPRC1Q5VV67 1664 aaKnown RBP29.32■■■□□ 2.28
NECTIN1-202ENST00000340882 CUL7Q14999 1698 aa29.3■■■□□ 2.28
NECTIN1-202ENST00000340882 TTBK1Q5TCY1 1321 aaPredicted RBP29.28■■■□□ 2.28
NECTIN1-202ENST00000340882 PTPRGP23470 1445 aa29.28■■■□□ 2.28
NECTIN1-202ENST00000340882 ABCC2Q92887 1545 aa29.22■■■□□ 2.27
NECTIN1-202ENST00000340882 ASXL2Q76L83 1435 aa29.2■■■□□ 2.27
NECTIN1-202ENST00000340882 KIF27Q86VH2 1401 aa29.2■■■□□ 2.27
NECTIN1-202ENST00000340882 GLI2P10070 1586 aa29.19■■■□□ 2.26
NECTIN1-202ENST00000340882 ADGRL1O94910 1474 aa29.18■■■□□ 2.26
NECTIN1-202ENST00000340882 TNIKQ9UKE5 1360 aa29.16■■■□□ 2.26
NECTIN1-202ENST00000340882 COL17A1Q9UMD9 1497 aaPredicted RBP29.15■■■□□ 2.26
NECTIN1-202ENST00000340882 PLB1Q6P1J6 1458 aa29.13■■■□□ 2.25
NECTIN1-202ENST00000340882 CARMIL1Q5VZK9 1371 aa29.11■■■□□ 2.25
NECTIN1-202ENST00000340882 CARMIL2Q6F5E8 1435 aa29.1■■■□□ 2.25
NECTIN1-202ENST00000340882 UHRF1BP1LA0JNW5 1464 aa29.09■■■□□ 2.25
NECTIN1-202ENST00000340882 IQGAP2Q13576 1575 aa29.08■■■□□ 2.25
NECTIN1-202ENST00000340882 MAP3K4Q9Y6R4 1608 aa29.06■■■□□ 2.24
NECTIN1-202ENST00000340882 DISP1Q96F81 1524 aa29.04■■■□□ 2.24
NECTIN1-202ENST00000340882 UACAQ9BZF9 1416 aa29.03■■■□□ 2.24
NECTIN1-202ENST00000340882 EPRSP07814 1512 aaKnown RBP29.03■■■□□ 2.24
NECTIN1-202ENST00000340882 HECW2Q9P2P5 1572 aa29.01■■■□□ 2.24
NECTIN1-202ENST00000340882 KDM5BQ9UGL1 1544 aa28.99■■■□□ 2.23
NECTIN1-202ENST00000340882 ZCCHC11Q5TAX3 1644 aaKnown RBP28.98■■■□□ 2.23
NECTIN1-202ENST00000340882 TEX14Q8IWB6 1497 aa28.9■■■□□ 2.22
NECTIN1-202ENST00000340882 UGGT2Q9NYU1 1516 aa28.87■■■□□ 2.21
NECTIN1-202ENST00000340882 KIAA0556O60303 1618 aa28.85■■■□□ 2.21
NECTIN1-202ENST00000340882 WDR7Q9Y4E6 1490 aa28.78■■■□□ 2.2
NECTIN1-202ENST00000340882 RAPGEF2Q9Y4G8 1499 aa28.76■■■□□ 2.19
NECTIN1-202ENST00000340882 CFAP43Q8NDM7 1665 aa28.71■■■□□ 2.19
NECTIN1-202ENST00000340882 KIF21BO75037 1637 aa28.69■■■□□ 2.18
NECTIN1-202ENST00000340882 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
NECTIN1-202ENST00000340882 CD109Q6YHK3 1445 aa28.69■■■□□ 2.18
NECTIN1-202ENST00000340882 KCNH8Q96L42 1107 aa28.66■■■□□ 2.18
NECTIN1-202ENST00000340882 CTTNBP2Q8WZ74 1663 aa28.64■■■□□ 2.18
NECTIN1-202ENST00000340882 ABCA8O94911 1581 aa28.64■■■□□ 2.18
NECTIN1-202ENST00000340882 GOLGA3Q08378 1498 aa28.5■■■□□ 2.15
NECTIN1-202ENST00000340882 ARAP3Q8WWN8 1544 aa28.49■■■□□ 2.15
NECTIN1-202ENST00000340882 FBXO41Q8TF61 875 aa28.49■■■□□ 2.15
NECTIN1-202ENST00000340882 ADAMTSL3P82987 1691 aa28.47■■■□□ 2.15
NECTIN1-202ENST00000340882 ARID3CA6NKF2 412 aa28.45■■■□□ 2.14
NECTIN1-202ENST00000340882 PTPRMP28827 1452 aa28.43■■■□□ 2.14
NECTIN1-202ENST00000340882 ATP10BO94823 1461 aa28.4■■■□□ 2.14
NECTIN1-202ENST00000340882 ABCA9Q8IUA7 1624 aa28.37■■■□□ 2.13
NECTIN1-202ENST00000340882 RAPGEF3O95398 923 aa28.35■■■□□ 2.13
NECTIN1-202ENST00000340882 BCORL1Q5H9F3 1711 aa28.34■■■□□ 2.13
NECTIN1-202ENST00000340882 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
NECTIN1-202ENST00000340882 P3H3Q8IVL6 736 aa28.33■■■□□ 2.13
NECTIN1-202ENST00000340882 FRMPD1Q5SYB0 1578 aa28.32■■■□□ 2.12
NECTIN1-202ENST00000340882 MADDQ8WXG6 1647 aa28.31■■■□□ 2.12
NECTIN1-202ENST00000340882 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
NECTIN1-202ENST00000340882 PCF11O94913 1555 aaKnown RBP28.26■■■□□ 2.11
NECTIN1-202ENST00000340882 LMTK3Q96Q04 1460 aa28.25■■■□□ 2.11
NECTIN1-202ENST00000340882 NEO1Q92859 1461 aa28.23■■■□□ 2.11
NECTIN1-202ENST00000340882 RIMS1Q86UR5 1692 aaKnown RBP28.2■■■□□ 2.11
NECTIN1-202ENST00000340882 RAPGEF6Q8TEU7 1601 aa28.2■■■□□ 2.1
NECTIN1-202ENST00000340882 ARID4BQ4LE39 1312 aaPredicted RBP28.19■■■□□ 2.1
NECTIN1-202ENST00000340882 SAMD9Q5K651 1589 aa28.18■■■□□ 2.1
NECTIN1-202ENST00000340882 RICTORQ6R327 1708 aa28.14■■■□□ 2.1
NECTIN1-202ENST00000340882 ARHGEF40Q8TER5 1519 aa28.13■■■□□ 2.09
NECTIN1-202ENST00000340882 SIGLEC1Q9BZZ2 1709 aa28.12■■■□□ 2.09
NECTIN1-202ENST00000340882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
NECTIN1-202ENST00000340882 HSPA2P54652 639 aa28.1■■■□□ 2.09
NECTIN1-202ENST00000340882 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
NECTIN1-202ENST00000340882 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
NECTIN1-202ENST00000340882 NUP153P49790 1475 aaKnown RBP28.09■■■□□ 2.09
NECTIN1-202ENST00000340882 DENND4BO75064 1496 aaPredicted RBP28.04■■■□□ 2.08
NECTIN1-202ENST00000340882 PLPPR3Q6T4P5 718 aa28.04■■■□□ 2.08
NECTIN1-202ENST00000340882 AKNAQ7Z591 1439 aa28.01■■■□□ 2.08
NECTIN1-202ENST00000340882 FHOD3Q2V2M9 1422 aa28■■■□□ 2.07
NECTIN1-202ENST00000340882 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
NECTIN1-202ENST00000340882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.97■■■□□ 2.07
NECTIN1-202ENST00000340882 FANCAO15360 1455 aa27.97■■■□□ 2.07
NECTIN1-202ENST00000340882 TTC37Q6PGP7 1564 aa27.96■■■□□ 2.07
NECTIN1-202ENST00000340882 ZMYM4Q5VZL5 1548 aa27.96■■■□□ 2.07
NECTIN1-202ENST00000340882 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
NECTIN1-202ENST00000340882 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
NECTIN1-202ENST00000340882 CERKQ8TCT0 537 aa27.93■■■□□ 2.06
NECTIN1-202ENST00000340882 FER1L4A9Z1Z3 1794 aa27.93■■■□□ 2.06
NECTIN1-202ENST00000340882 ZFYVE16Q7Z3T8 1539 aa27.92■■■□□ 2.06
NECTIN1-202ENST00000340882 PLEKHD1A6NEE1 506 aa27.92■■■□□ 2.06
NECTIN1-202ENST00000340882 CSRNP3Q8WYN3 585 aa27.92■■■□□ 2.06
NECTIN1-202ENST00000340882 MLECQ14165 292 aa27.9■■■□□ 2.06
NECTIN1-202ENST00000340882 POGZQ7Z3K3 1410 aa27.9■■■□□ 2.06
NECTIN1-202ENST00000340882 HECW1Q76N89 1606 aa27.89■■■□□ 2.06
NECTIN1-202ENST00000340882 EFCAB5A4FU69 1503 aa27.88■■■□□ 2.05
NECTIN1-202ENST00000340882 MAGI2Q86UL8 1455 aa27.82■■■□□ 2.04
NECTIN1-202ENST00000340882 CDK13Q14004 1512 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms