RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
PHKA1-201ENST00000339490 SENP3-EIF4A1A0A087X0R7 540 aa23.07■■□□□ 1.28
PHKA1-201ENST00000339490 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
PHKA1-201ENST00000339490 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
PHKA1-201ENST00000339490 ZBTB7CA1YPR0 619 aa22.99■■□□□ 1.27
PHKA1-201ENST00000339490 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
PHKA1-201ENST00000339490 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
PHKA1-201ENST00000339490 MYO15BQ96JP2 1530 aa22.98■■□□□ 1.27
PHKA1-201ENST00000339490 A0A0G2JS52 829 aa22.94■■□□□ 1.26
PHKA1-201ENST00000339490 CEP162Q5TB80 1403 aa22.94■■□□□ 1.26
PHKA1-201ENST00000339490 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
PHKA1-201ENST00000339490 GLIPR1L2Q4G1C9 344 aa22.92■■□□□ 1.26
PHKA1-201ENST00000339490 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
PHKA1-201ENST00000339490 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.25
PHKA1-201ENST00000339490 RSF1Q96T23 1441 aaPredicted RBP22.88■■□□□ 1.25
PHKA1-201ENST00000339490 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
PHKA1-201ENST00000339490 PLEKHD1A6NEE1 506 aa22.86■■□□□ 1.25
PHKA1-201ENST00000339490 BECN1Q14457 450 aa22.86■■□□□ 1.25
PHKA1-201ENST00000339490 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
PHKA1-201ENST00000339490 KNSTRNQ9Y448 316 aa22.8■■□□□ 1.24
PHKA1-201ENST00000339490 PPM1GO15355 546 aaPredicted RBP22.79■■□□□ 1.24
PHKA1-201ENST00000339490 CARD11Q9BXL7 1154 aa22.79■■□□□ 1.24
PHKA1-201ENST00000339490 CFAP53Q96M91 514 aa22.78■■□□□ 1.24
PHKA1-201ENST00000339490 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
PHKA1-201ENST00000339490 EEA1Q15075 1411 aa22.77■■□□□ 1.24
PHKA1-201ENST00000339490 NCLP19338 710 aaKnown RBP22.76■■□□□ 1.23
PHKA1-201ENST00000339490 NEUROD2Q15784 382 aa22.76■■□□□ 1.23
PHKA1-201ENST00000339490 SIN3AQ96ST3 1273 aa22.76■■□□□ 1.23
PHKA1-201ENST00000339490 TRIM44Q96DX7 344 aaPredicted RBP22.74■■□□□ 1.23
PHKA1-201ENST00000339490 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
PHKA1-201ENST00000339490 CDCA8Q53HL2 280 aa22.71■■□□□ 1.23
PHKA1-201ENST00000339490 FTSJ3Q8IY81 847 aaKnown RBP22.71■■□□□ 1.23
PHKA1-201ENST00000339490 GOLGA6L22H0YM25 854 aa22.71■■□□□ 1.23
PHKA1-201ENST00000339490 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
PHKA1-201ENST00000339490 TPRNQ4KMQ1 711 aa22.69■■□□□ 1.22
PHKA1-201ENST00000339490 CDK11BP21127 795 aaKnown RBP22.66■■□□□ 1.22
PHKA1-201ENST00000339490 TNIKQ9UKE5 1360 aa22.65■■□□□ 1.22
PHKA1-201ENST00000339490 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
PHKA1-201ENST00000339490 TNNT2P45379 298 aaPredicted RBP22.64■■□□□ 1.21
PHKA1-201ENST00000339490 ANP32EQ9BTT0 268 aa22.64■■□□□ 1.21
PHKA1-201ENST00000339490 RGS3P49796 1198 aa22.64■■□□□ 1.21
PHKA1-201ENST00000339490 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
PHKA1-201ENST00000339490 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
PHKA1-201ENST00000339490 ARID4BQ4LE39 1312 aaPredicted RBP22.62■■□□□ 1.21
PHKA1-201ENST00000339490 FRAT1Q92837 279 aaPredicted RBP22.62■■□□□ 1.21
PHKA1-201ENST00000339490 CASC1Q6TDU7 716 aa22.62■■□□□ 1.21
PHKA1-201ENST00000339490 MAPK8IP3Q9UPT6 1336 aa22.62■■□□□ 1.21
PHKA1-201ENST00000339490 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
PHKA1-201ENST00000339490 PPP4R2Q9NY27 417 aa22.61■■□□□ 1.21
PHKA1-201ENST00000339490 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
PHKA1-201ENST00000339490 HAP1P54257 671 aaPredicted RBP22.58■■□□□ 1.21
PHKA1-201ENST00000339490 PTMAP06454 111 aaKnown RBP22.58■■□□□ 1.21
PHKA1-201ENST00000339490 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
PHKA1-201ENST00000339490 POGKQ9P215 609 aa22.55■■□□□ 1.2
PHKA1-201ENST00000339490 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
PHKA1-201ENST00000339490 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
PHKA1-201ENST00000339490 ZRSR1Q15695 479 aaKnown RBP22.53■■□□□ 1.2
PHKA1-201ENST00000339490 U2SURPO15042 1029 aaKnown RBP22.5■■□□□ 1.19
PHKA1-201ENST00000339490 LMOD2Q6P5Q4 547 aa22.49■■□□□ 1.19
PHKA1-201ENST00000339490 DNTTIP2Q5QJE6 756 aaKnown RBP22.48■■□□□ 1.19
PHKA1-201ENST00000339490 NOP58Q9Y2X3 529 aaKnown RBP22.48■■□□□ 1.19
PHKA1-201ENST00000339490 DCAF11Q8TEB1 546 aa22.47■■□□□ 1.19
PHKA1-201ENST00000339490 TAOK2Q9UL54 1235 aa22.47■■□□□ 1.19
PHKA1-201ENST00000339490 RTN4Q9NQC3 1192 aaKnown RBP22.46■■□□□ 1.19
PHKA1-201ENST00000339490 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
PHKA1-201ENST00000339490 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
PHKA1-201ENST00000339490 PLCB2Q00722 1185 aa22.42■■□□□ 1.18
PHKA1-201ENST00000339490 TMF1P82094 1093 aa22.41■■□□□ 1.18
PHKA1-201ENST00000339490 OS9Q13438 667 aaPredicted RBP22.4■■□□□ 1.18
PHKA1-201ENST00000339490 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.17
PHKA1-201ENST00000339490 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
PHKA1-201ENST00000339490 NAP1L5Q96NT1 182 aaPredicted RBP22.37■■□□□ 1.17
PHKA1-201ENST00000339490 MS4A1P11836 297 aa22.35■■□□□ 1.17
PHKA1-201ENST00000339490 CHMP4BQ9H444 224 aaKnown RBP22.35■■□□□ 1.17
PHKA1-201ENST00000339490 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
PHKA1-201ENST00000339490 SOX12O15370 315 aa22.33■■□□□ 1.17
PHKA1-201ENST00000339490 FGD1P98174 961 aa22.33■■□□□ 1.16
PHKA1-201ENST00000339490 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
PHKA1-201ENST00000339490 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
PHKA1-201ENST00000339490 KCNJ4P48050 445 aa22.32■■□□□ 1.16
PHKA1-201ENST00000339490 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
PHKA1-201ENST00000339490 PNNQ9H307 717 aaKnown RBP22.31■■□□□ 1.16
PHKA1-201ENST00000339490 SOGA1O94964 1423 aa22.31■■□□□ 1.16
PHKA1-201ENST00000339490 NAP1L2Q9ULW6 460 aaPredicted RBP22.31■■□□□ 1.16
PHKA1-201ENST00000339490 SRPK2P78362 688 aaKnown RBP22.3■■□□□ 1.16
PHKA1-201ENST00000339490 SPRYD3Q8NCJ5 442 aa22.3■■□□□ 1.16
PHKA1-201ENST00000339490 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
PHKA1-201ENST00000339490 MORC1Q86VD1 984 aa22.29■■□□□ 1.16
PHKA1-201ENST00000339490 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
PHKA1-201ENST00000339490 FOXD1Q16676 465 aa22.28■■□□□ 1.16
PHKA1-201ENST00000339490 NACADO15069 1562 aa22.27■■□□□ 1.16
PHKA1-201ENST00000339490 HSCBQ8IWL3 235 aa22.27■■□□□ 1.16
PHKA1-201ENST00000339490 NPHP1O15259 732 aa22.27■■□□□ 1.15
PHKA1-201ENST00000339490 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
PHKA1-201ENST00000339490 KANK1Q14678 1352 aa22.25■■□□□ 1.15
PHKA1-201ENST00000339490 SETD5Q9C0A6 1442 aa22.25■■□□□ 1.15
PHKA1-201ENST00000339490 CUX2O14529 1486 aa22.25■■□□□ 1.15
PHKA1-201ENST00000339490 MLECQ14165 292 aa22.25■■□□□ 1.15
PHKA1-201ENST00000339490 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
PHKA1-201ENST00000339490 PKD2Q13563 968 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms