RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
LINC01116-202ENST00000339037 PRG4Q92954 1404 aaPredicted RBP27.64■■■□□ 2.02
LINC01116-202ENST00000339037 JPH4Q96JJ6 628 aa27.6■■■□□ 2.01
LINC01116-202ENST00000339037 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
LINC01116-202ENST00000339037 KIF27Q86VH2 1401 aa27.47■■□□□ 1.99
LINC01116-202ENST00000339037 IGF1RP08069 1367 aa27.45■■□□□ 1.98
LINC01116-202ENST00000339037 KIAA0586Q9BVV6 1533 aa27.41■■□□□ 1.98
LINC01116-202ENST00000339037 KIF13AQ9H1H9 1805 aa27.41■■□□□ 1.98
LINC01116-202ENST00000339037 CUL7Q14999 1698 aa27.4■■□□□ 1.98
LINC01116-202ENST00000339037 NPM1P06748 294 aaKnown RBP eCLIP27.38■■□□□ 1.97
LINC01116-202ENST00000339037 MAPKBP1O60336 1514 aa27.34■■□□□ 1.97
LINC01116-202ENST00000339037 ABCC10Q5T3U5 1492 aa27.33■■□□□ 1.97
LINC01116-202ENST00000339037 ADCY10Q96PN6 1610 aa27.33■■□□□ 1.97
LINC01116-202ENST00000339037 FAM69CQ0P6D2 419 aa27.32■■□□□ 1.96
LINC01116-202ENST00000339037 CARMIL1Q5VZK9 1371 aa27.27■■□□□ 1.96
LINC01116-202ENST00000339037 DIP2BQ9P265 1576 aa27.25■■□□□ 1.95
LINC01116-202ENST00000339037 PTPRGP23470 1445 aa27.2■■□□□ 1.94
LINC01116-202ENST00000339037 CARMIL2Q6F5E8 1435 aa27.16■■□□□ 1.94
LINC01116-202ENST00000339037 TTBK1Q5TCY1 1321 aaPredicted RBP27.14■■□□□ 1.93
LINC01116-202ENST00000339037 IQGAP2Q13576 1575 aa27.14■■□□□ 1.93
LINC01116-202ENST00000339037 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
LINC01116-202ENST00000339037 FOXD1Q16676 465 aa27.13■■□□□ 1.93
LINC01116-202ENST00000339037 ABCC2Q92887 1545 aa27.08■■□□□ 1.93
LINC01116-202ENST00000339037 KDM6BO15054 1643 aa27.05■■□□□ 1.92
LINC01116-202ENST00000339037 TSPOAP1O95153 1857 aa27.02■■□□□ 1.92
LINC01116-202ENST00000339037 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
LINC01116-202ENST00000339037 DISP1Q96F81 1524 aa27■■□□□ 1.91
LINC01116-202ENST00000339037 UHRF1BP1LA0JNW5 1464 aa27■■□□□ 1.91
LINC01116-202ENST00000339037 ASXL2Q76L83 1435 aa26.99■■□□□ 1.91
LINC01116-202ENST00000339037 PLB1Q6P1J6 1458 aa26.98■■□□□ 1.91
LINC01116-202ENST00000339037 UACAQ9BZF9 1416 aa26.98■■□□□ 1.91
LINC01116-202ENST00000339037 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.9
LINC01116-202ENST00000339037 GLI2P10070 1586 aa26.91■■□□□ 1.9
LINC01116-202ENST00000339037 KIAA0556O60303 1618 aa26.88■■□□□ 1.89
LINC01116-202ENST00000339037 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
LINC01116-202ENST00000339037 KDM4FA0A1W2PPD8 638 aa26.83■■□□□ 1.89
LINC01116-202ENST00000339037 PPRC1Q5VV67 1664 aaKnown RBP26.82■■□□□ 1.88
LINC01116-202ENST00000339037 EPRSP07814 1512 aaKnown RBP26.81■■□□□ 1.88
LINC01116-202ENST00000339037 ZCCHC11Q5TAX3 1644 aaKnown RBP26.79■■□□□ 1.88
LINC01116-202ENST00000339037 CTTNBP2Q8WZ74 1663 aa26.76■■□□□ 1.87
LINC01116-202ENST00000339037 MAP3K4Q9Y6R4 1608 aa26.76■■□□□ 1.87
LINC01116-202ENST00000339037 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
LINC01116-202ENST00000339037 TEX14Q8IWB6 1497 aa26.73■■□□□ 1.87
LINC01116-202ENST00000339037 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
LINC01116-202ENST00000339037 PRXQ9BXM0 1461 aa26.69■■□□□ 1.86
LINC01116-202ENST00000339037 COL17A1Q9UMD9 1497 aaPredicted RBP26.69■■□□□ 1.86
LINC01116-202ENST00000339037 ABCA8O94911 1581 aa26.63■■□□□ 1.85
LINC01116-202ENST00000339037 ADGRL1O94910 1474 aa26.62■■□□□ 1.85
LINC01116-202ENST00000339037 ADRA2BP18089 450 aa26.61■■□□□ 1.85
LINC01116-202ENST00000339037 PPP6R1Q9UPN7 881 aa26.61■■□□□ 1.85
LINC01116-202ENST00000339037 KCNH8Q96L42 1107 aa26.56■■□□□ 1.84
LINC01116-202ENST00000339037 CD109Q6YHK3 1445 aa26.56■■□□□ 1.84
LINC01116-202ENST00000339037 MAGI3Q5TCQ9 1506 aa26.54■■□□□ 1.84
LINC01116-202ENST00000339037 CFAP43Q8NDM7 1665 aa26.53■■□□□ 1.84
LINC01116-202ENST00000339037 FAM9AQ8IZU1 332 aaPredicted RBP26.51■■□□□ 1.83
LINC01116-202ENST00000339037 P3H3Q8IVL6 736 aa26.47■■□□□ 1.83
LINC01116-202ENST00000339037 ARID3CA6NKF2 412 aa26.45■■□□□ 1.82
LINC01116-202ENST00000339037 CSRNP3Q8WYN3 585 aa26.44■■□□□ 1.82
LINC01116-202ENST00000339037 ATP10BO94823 1461 aa26.42■■□□□ 1.82
LINC01116-202ENST00000339037 SAMD9Q5K651 1589 aa26.39■■□□□ 1.82
LINC01116-202ENST00000339037 ARAP3Q8WWN8 1544 aa26.34■■□□□ 1.81
LINC01116-202ENST00000339037 EEA1Q15075 1411 aa26.32■■□□□ 1.8
LINC01116-202ENST00000339037 RAPGEF6Q8TEU7 1601 aa26.32■■□□□ 1.8
LINC01116-202ENST00000339037 ABCA9Q8IUA7 1624 aa26.31■■□□□ 1.8
LINC01116-202ENST00000339037 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
LINC01116-202ENST00000339037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
LINC01116-202ENST00000339037 HNRNPUL2Q1KMD3 747 aaKnown RBP26.28■■□□□ 1.8
LINC01116-202ENST00000339037 PHLDB1Q86UU1 1377 aa26.28■■□□□ 1.8
LINC01116-202ENST00000339037 KIF21BO75037 1637 aa26.26■■□□□ 1.79
LINC01116-202ENST00000339037 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
LINC01116-202ENST00000339037 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
LINC01116-202ENST00000339037 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
LINC01116-202ENST00000339037 NEO1Q92859 1461 aa26.22■■□□□ 1.79
LINC01116-202ENST00000339037 RAPGEF3O95398 923 aa26.18■■□□□ 1.78
LINC01116-202ENST00000339037 ILDR1Q86SU0 546 aaPredicted RBP26.16■■□□□ 1.78
LINC01116-202ENST00000339037 EFCAB5A4FU69 1503 aa26.13■■□□□ 1.77
LINC01116-202ENST00000339037 PLEKHD1A6NEE1 506 aa26.12■■□□□ 1.77
LINC01116-202ENST00000339037 FRMPD1Q5SYB0 1578 aa26.1■■□□□ 1.77
LINC01116-202ENST00000339037 ADAMTSL3P82987 1691 aa26.05■■□□□ 1.76
LINC01116-202ENST00000339037 PTPRMP28827 1452 aa26.04■■□□□ 1.76
LINC01116-202ENST00000339037 ARID4BQ4LE39 1312 aaPredicted RBP26.03■■□□□ 1.76
LINC01116-202ENST00000339037 FANCAO15360 1455 aa26.03■■□□□ 1.76
LINC01116-202ENST00000339037 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
LINC01116-202ENST00000339037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.02■■□□□ 1.76
LINC01116-202ENST00000339037 AKNAQ7Z591 1439 aa26.01■■□□□ 1.75
LINC01116-202ENST00000339037 ARHGEF40Q8TER5 1519 aa26■■□□□ 1.75
LINC01116-202ENST00000339037 TTC37Q6PGP7 1564 aa25.99■■□□□ 1.75
LINC01116-202ENST00000339037 CFAP74Q9C0B2 1584 aa25.99■■□□□ 1.75
LINC01116-202ENST00000339037 BCORL1Q5H9F3 1711 aa25.98■■□□□ 1.75
LINC01116-202ENST00000339037 CDK13Q14004 1512 aaKnown RBP25.97■■□□□ 1.75
LINC01116-202ENST00000339037 RICTORQ6R327 1708 aa25.97■■□□□ 1.75
LINC01116-202ENST00000339037 MADDQ8WXG6 1647 aa25.95■■□□□ 1.74
LINC01116-202ENST00000339037 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
LINC01116-202ENST00000339037 EHMT2Q96KQ7 1210 aa25.93■■□□□ 1.74
LINC01116-202ENST00000339037 FMN1Q68DA7 1419 aa25.91■■□□□ 1.74
LINC01116-202ENST00000339037 ZMYM4Q5VZL5 1548 aa25.91■■□□□ 1.74
LINC01116-202ENST00000339037 ATP1B4Q9UN42 357 aaPredicted RBP25.87■■□□□ 1.73
LINC01116-202ENST00000339037 HECW1Q76N89 1606 aa25.87■■□□□ 1.73
LINC01116-202ENST00000339037 ZFYVE16Q7Z3T8 1539 aa25.87■■□□□ 1.73
LINC01116-202ENST00000339037 PLCH2O75038 1416 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms