RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 KIF27Q86VH2 1401 aa24.8■■□□□ 1.56
COMMD4-202ENST00000338995 IGF1RP08069 1367 aa24.79■■□□□ 1.56
COMMD4-202ENST00000338995 FAM69CQ0P6D2 419 aa24.75■■□□□ 1.55
COMMD4-202ENST00000338995 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
COMMD4-202ENST00000338995 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
COMMD4-202ENST00000338995 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
COMMD4-202ENST00000338995 CUL7Q14999 1698 aa24.64■■□□□ 1.53
COMMD4-202ENST00000338995 ABCC10Q5T3U5 1492 aa24.63■■□□□ 1.53
COMMD4-202ENST00000338995 KIF13AQ9H1H9 1805 aa24.6■■□□□ 1.53
COMMD4-202ENST00000338995 PTPRGP23470 1445 aa24.6■■□□□ 1.53
COMMD4-202ENST00000338995 MAPKBP1O60336 1514 aa24.59■■□□□ 1.53
COMMD4-202ENST00000338995 CARMIL2Q6F5E8 1435 aa24.57■■□□□ 1.52
COMMD4-202ENST00000338995 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
COMMD4-202ENST00000338995 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
COMMD4-202ENST00000338995 TNIKQ9UKE5 1360 aa24.52■■□□□ 1.52
COMMD4-202ENST00000338995 DIP2BQ9P265 1576 aa24.46■■□□□ 1.51
COMMD4-202ENST00000338995 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
COMMD4-202ENST00000338995 ABCC2Q92887 1545 aa24.38■■□□□ 1.49
COMMD4-202ENST00000338995 PLB1Q6P1J6 1458 aa24.37■■□□□ 1.49
COMMD4-202ENST00000338995 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
COMMD4-202ENST00000338995 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
COMMD4-202ENST00000338995 KDM6BO15054 1643 aa24.35■■□□□ 1.49
COMMD4-202ENST00000338995 UHRF1BP1LA0JNW5 1464 aa24.33■■□□□ 1.49
COMMD4-202ENST00000338995 TSPOAP1O95153 1857 aa24.33■■□□□ 1.49
COMMD4-202ENST00000338995 ASXL2Q76L83 1435 aa24.33■■□□□ 1.49
COMMD4-202ENST00000338995 DISP1Q96F81 1524 aa24.27■■□□□ 1.48
COMMD4-202ENST00000338995 FAM9AQ8IZU1 332 aaPredicted RBP24.26■■□□□ 1.47
COMMD4-202ENST00000338995 UGGT2Q9NYU1 1516 aa24.25■■□□□ 1.47
COMMD4-202ENST00000338995 GLI2P10070 1586 aa24.24■■□□□ 1.47
COMMD4-202ENST00000338995 KDM4FA0A1W2PPD8 638 aa24.23■■□□□ 1.47
COMMD4-202ENST00000338995 KDM5BQ9UGL1 1544 aa24.2■■□□□ 1.47
COMMD4-202ENST00000338995 EPRSP07814 1512 aaKnown RBP24.15■■□□□ 1.46
COMMD4-202ENST00000338995 GOLGA3Q08378 1498 aa24.15■■□□□ 1.46
COMMD4-202ENST00000338995 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
COMMD4-202ENST00000338995 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
COMMD4-202ENST00000338995 KCNH8Q96L42 1107 aa24.08■■□□□ 1.45
COMMD4-202ENST00000338995 ZCCHC11Q5TAX3 1644 aaKnown RBP24.07■■□□□ 1.44
COMMD4-202ENST00000338995 PPRC1Q5VV67 1664 aaKnown RBP24.05■■□□□ 1.44
COMMD4-202ENST00000338995 WDR7Q9Y4E6 1490 aa24.05■■□□□ 1.44
COMMD4-202ENST00000338995 MAP3K4Q9Y6R4 1608 aa24.02■■□□□ 1.44
COMMD4-202ENST00000338995 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
COMMD4-202ENST00000338995 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
COMMD4-202ENST00000338995 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
COMMD4-202ENST00000338995 CD109Q6YHK3 1445 aa24■■□□□ 1.43
COMMD4-202ENST00000338995 CSRNP3Q8WYN3 585 aa23.98■■□□□ 1.43
COMMD4-202ENST00000338995 P3H3Q8IVL6 736 aa23.96■■□□□ 1.43
COMMD4-202ENST00000338995 ABCA8O94911 1581 aa23.95■■□□□ 1.42
COMMD4-202ENST00000338995 ADGRL1O94910 1474 aa23.94■■□□□ 1.42
COMMD4-202ENST00000338995 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
COMMD4-202ENST00000338995 ARID3CA6NKF2 412 aa23.88■■□□□ 1.41
COMMD4-202ENST00000338995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
COMMD4-202ENST00000338995 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
COMMD4-202ENST00000338995 CFAP43Q8NDM7 1665 aa23.86■■□□□ 1.41
COMMD4-202ENST00000338995 ATP10BO94823 1461 aa23.82■■□□□ 1.4
COMMD4-202ENST00000338995 PHLDB1Q86UU1 1377 aa23.82■■□□□ 1.4
COMMD4-202ENST00000338995 EEA1Q15075 1411 aa23.79■■□□□ 1.4
COMMD4-202ENST00000338995 RANGAP1P46060 587 aaPredicted RBP23.77■■□□□ 1.4
COMMD4-202ENST00000338995 ARAP3Q8WWN8 1544 aa23.74■■□□□ 1.39
COMMD4-202ENST00000338995 PLEKHD1A6NEE1 506 aa23.73■■□□□ 1.39
COMMD4-202ENST00000338995 SAMD9Q5K651 1589 aa23.69■■□□□ 1.38
COMMD4-202ENST00000338995 RAPGEF6Q8TEU7 1601 aa23.67■■□□□ 1.38
COMMD4-202ENST00000338995 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
COMMD4-202ENST00000338995 ILDR1Q86SU0 546 aaPredicted RBP23.67■■□□□ 1.38
COMMD4-202ENST00000338995 NEO1Q92859 1461 aa23.65■■□□□ 1.38
COMMD4-202ENST00000338995 ABCA9Q8IUA7 1624 aa23.65■■□□□ 1.38
COMMD4-202ENST00000338995 ARID4BQ4LE39 1312 aaPredicted RBP23.61■■□□□ 1.37
COMMD4-202ENST00000338995 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
COMMD4-202ENST00000338995 FHOD3Q2V2M9 1422 aa23.6■■□□□ 1.37
COMMD4-202ENST00000338995 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
COMMD4-202ENST00000338995 KIF21BO75037 1637 aa23.56■■□□□ 1.36
COMMD4-202ENST00000338995 UBTFP17480 764 aaKnown RBP23.55■■□□□ 1.36
COMMD4-202ENST00000338995 EFCAB5A4FU69 1503 aa23.51■■□□□ 1.35
COMMD4-202ENST00000338995 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
COMMD4-202ENST00000338995 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
COMMD4-202ENST00000338995 AKNAQ7Z591 1439 aa23.5■■□□□ 1.35
COMMD4-202ENST00000338995 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
COMMD4-202ENST00000338995 PTPRMP28827 1452 aa23.47■■□□□ 1.35
COMMD4-202ENST00000338995 FANCAO15360 1455 aa23.45■■□□□ 1.34
COMMD4-202ENST00000338995 EHMT2Q96KQ7 1210 aa23.44■■□□□ 1.34
COMMD4-202ENST00000338995 ADAMTSL3P82987 1691 aa23.42■■□□□ 1.34
COMMD4-202ENST00000338995 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
COMMD4-202ENST00000338995 CFAP74Q9C0B2 1584 aa23.4■■□□□ 1.34
COMMD4-202ENST00000338995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
COMMD4-202ENST00000338995 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
COMMD4-202ENST00000338995 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.33
COMMD4-202ENST00000338995 FRMPD1Q5SYB0 1578 aa23.37■■□□□ 1.33
COMMD4-202ENST00000338995 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
COMMD4-202ENST00000338995 PLCH2O75038 1416 aa23.35■■□□□ 1.33
COMMD4-202ENST00000338995 MAGI2Q86UL8 1455 aa23.35■■□□□ 1.33
COMMD4-202ENST00000338995 CHIC1Q5VXU3 224 aa23.34■■□□□ 1.33
COMMD4-202ENST00000338995 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.33
COMMD4-202ENST00000338995 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
COMMD4-202ENST00000338995 ARHGEF40Q8TER5 1519 aa23.32■■□□□ 1.32
COMMD4-202ENST00000338995 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
COMMD4-202ENST00000338995 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
COMMD4-202ENST00000338995 FBXO41Q8TF61 875 aa23.31■■□□□ 1.32
COMMD4-202ENST00000338995 MLECQ14165 292 aa23.3■■□□□ 1.32
COMMD4-202ENST00000338995 TTC37Q6PGP7 1564 aa23.3■■□□□ 1.32
COMMD4-202ENST00000338995 MADDQ8WXG6 1647 aa23.3■■□□□ 1.32
COMMD4-202ENST00000338995 ZFYVE16Q7Z3T8 1539 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms