RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 KIF21BO75037 1637 aa19.67■□□□□ 0.74
PCDH8-201ENST00000338862 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
PCDH8-201ENST00000338862 NBR1Q14596 966 aa19.65■□□□□ 0.74
PCDH8-201ENST00000338862 B4GALNT3Q6L9W6 998 aa19.59■□□□□ 0.73
PCDH8-201ENST00000338862 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
PCDH8-201ENST00000338862 SALL2Q9Y467 1007 aaPredicted RBP19.58■□□□□ 0.72
PCDH8-201ENST00000338862 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
PCDH8-201ENST00000338862 ARAP1Q96P48 1450 aa19.56■□□□□ 0.72
PCDH8-201ENST00000338862 SETD5Q9C0A6 1442 aa19.55■□□□□ 0.72
PCDH8-201ENST00000338862 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
PCDH8-201ENST00000338862 FOXD1Q16676 465 aa19.54■□□□□ 0.72
PCDH8-201ENST00000338862 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
PCDH8-201ENST00000338862 NPM2Q86SE8 214 aaKnown RBP19.51■□□□□ 0.71
PCDH8-201ENST00000338862 ATAD2BQ9ULI0 1458 aa19.49■□□□□ 0.71
PCDH8-201ENST00000338862 CUX2O14529 1486 aa19.47■□□□□ 0.71
PCDH8-201ENST00000338862 MTUS2Q5JR59 1369 aa19.46■□□□□ 0.71
PCDH8-201ENST00000338862 CARMIL1Q5VZK9 1371 aa19.43■□□□□ 0.7
PCDH8-201ENST00000338862 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
PCDH8-201ENST00000338862 HSPA5P11021 654 aaKnown RBP19.41■□□□□ 0.7
PCDH8-201ENST00000338862 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
PCDH8-201ENST00000338862 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.69
PCDH8-201ENST00000338862 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
PCDH8-201ENST00000338862 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
PCDH8-201ENST00000338862 RTL5Q5HYW3 569 aaPredicted RBP19.37■□□□□ 0.69
PCDH8-201ENST00000338862 FHOD3Q2V2M9 1422 aa19.36■□□□□ 0.69
PCDH8-201ENST00000338862 MSH5O43196 834 aa19.36■□□□□ 0.69
PCDH8-201ENST00000338862 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
PCDH8-201ENST00000338862 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
PCDH8-201ENST00000338862 RRBP1Q9P2E9 1410 aaKnown RBP19.33■□□□□ 0.69
PCDH8-201ENST00000338862 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
PCDH8-201ENST00000338862 PPP4R2Q9NY27 417 aa19.29■□□□□ 0.68
PCDH8-201ENST00000338862 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
PCDH8-201ENST00000338862 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
PCDH8-201ENST00000338862 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
PCDH8-201ENST00000338862 IGF1RP08069 1367 aa19.26■□□□□ 0.67
PCDH8-201ENST00000338862 DEKP35659 375 aaKnown RBP19.25■□□□□ 0.67
PCDH8-201ENST00000338862 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
PCDH8-201ENST00000338862 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
PCDH8-201ENST00000338862 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
PCDH8-201ENST00000338862 TMC1Q8TDI8 760 aa19.22■□□□□ 0.67
PCDH8-201ENST00000338862 TIMELESSQ9UNS1 1208 aa19.2■□□□□ 0.66
PCDH8-201ENST00000338862 WASHC2AQ641Q2 1341 aa19.18■□□□□ 0.66
PCDH8-201ENST00000338862 FBLN2P98095 1184 aa19.18■□□□□ 0.66
PCDH8-201ENST00000338862 ZBTB47Q9UFB7 747 aaPredicted RBP19.18■□□□□ 0.66
PCDH8-201ENST00000338862 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
PCDH8-201ENST00000338862 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
PCDH8-201ENST00000338862 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
PCDH8-201ENST00000338862 NOP58Q9Y2X3 529 aaKnown RBP19.15■□□□□ 0.66
PCDH8-201ENST00000338862 MAPKBP1O60336 1514 aa19.14■□□□□ 0.66
PCDH8-201ENST00000338862 CUX1P39880 1505 aa19.14■□□□□ 0.65
PCDH8-201ENST00000338862 TOP2BQ02880 1626 aa19.13■□□□□ 0.65
PCDH8-201ENST00000338862 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
PCDH8-201ENST00000338862 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
PCDH8-201ENST00000338862 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
PCDH8-201ENST00000338862 PRKRIP1Q9H875 184 aaPredicted RBP19.11■□□□□ 0.65
PCDH8-201ENST00000338862 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
PCDH8-201ENST00000338862 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
PCDH8-201ENST00000338862 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
PCDH8-201ENST00000338862 CCDC18Q5T9S5 1454 aa19.08■□□□□ 0.65
PCDH8-201ENST00000338862 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
PCDH8-201ENST00000338862 ERICH3Q5RHP9 1530 aa19.07■□□□□ 0.64
PCDH8-201ENST00000338862 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
PCDH8-201ENST00000338862 RGL3Q3MIN7 710 aa19.03■□□□□ 0.64
PCDH8-201ENST00000338862 FANCIQ9NVI1 1328 aa19.03■□□□□ 0.64
PCDH8-201ENST00000338862 FGD5Q6ZNL6 1462 aa19■□□□□ 0.63
PCDH8-201ENST00000338862 TIAM1Q13009 1591 aa18.99■□□□□ 0.63
PCDH8-201ENST00000338862 FGD6Q6ZV73 1430 aa18.98■□□□□ 0.63
PCDH8-201ENST00000338862 NBPF8Q3BBV2 869 aa18.98■□□□□ 0.63
PCDH8-201ENST00000338862 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.98■□□□□ 0.63
PCDH8-201ENST00000338862 ZNF644Q9H582 1327 aaPredicted RBP18.97■□□□□ 0.63
PCDH8-201ENST00000338862 CARD11Q9BXL7 1154 aa18.97■□□□□ 0.63
PCDH8-201ENST00000338862 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
PCDH8-201ENST00000338862 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
PCDH8-201ENST00000338862 AKNAQ7Z591 1439 aa18.94■□□□□ 0.62
PCDH8-201ENST00000338862 NEFMP07197 916 aa18.94■□□□□ 0.62
PCDH8-201ENST00000338862 KIF7Q2M1P5 1343 aa18.93■□□□□ 0.62
PCDH8-201ENST00000338862 CC2D1BQ5T0F9 858 aaKnown RBP18.92■□□□□ 0.62
PCDH8-201ENST00000338862 ARXQ96QS3 562 aa18.91■□□□□ 0.62
PCDH8-201ENST00000338862 PLIN1O60240 522 aa18.91■□□□□ 0.62
PCDH8-201ENST00000338862 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
PCDH8-201ENST00000338862 EIF5BO60841 1220 aaKnown RBP18.91■□□□□ 0.62
PCDH8-201ENST00000338862 PTPRKQ15262 1439 aa18.9■□□□□ 0.62
PCDH8-201ENST00000338862 SKAP1Q86WV1 359 aa18.9■□□□□ 0.62
PCDH8-201ENST00000338862 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
PCDH8-201ENST00000338862 PKD2Q13563 968 aa18.89■□□□□ 0.62
PCDH8-201ENST00000338862 CFDP1Q9UEE9 299 aaPredicted RBP18.89■□□□□ 0.61
PCDH8-201ENST00000338862 NUDCQ9Y266 331 aa18.89■□□□□ 0.61
PCDH8-201ENST00000338862 EXOC6Q8TAG9 804 aa18.88■□□□□ 0.61
PCDH8-201ENST00000338862 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
PCDH8-201ENST00000338862 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
PCDH8-201ENST00000338862 MYT1LQ9UL68 1186 aa18.88■□□□□ 0.61
PCDH8-201ENST00000338862 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
PCDH8-201ENST00000338862 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.61
PCDH8-201ENST00000338862 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.87■□□□□ 0.61
PCDH8-201ENST00000338862 IPO9Q96P70 1041 aaKnown RBP18.87■□□□□ 0.61
PCDH8-201ENST00000338862 CFTRP13569 1480 aa18.86■□□□□ 0.61
PCDH8-201ENST00000338862 PCF11O94913 1555 aaKnown RBP18.84■□□□□ 0.61
PCDH8-201ENST00000338862 NAIPQ13075 1403 aa18.82■□□□□ 0.6
PCDH8-201ENST00000338862 CNTLNQ9NXG0 1405 aa18.82■□□□□ 0.6
PCDH8-201ENST00000338862 ERICH6BQ5W0A0 696 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms