RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 SUPT16HQ9Y5B9 1047 aaKnown RBP10.62□□□□□ -0.71
TNPO1-201ENST00000337273 TNNT2P45379 298 aaPredicted RBP10.61□□□□□ -0.71
TNPO1-201ENST00000337273 PLPPR3Q6T4P5 718 aa10.61□□□□□ -0.71
TNPO1-201ENST00000337273 MYH16Q9H6N6 1097 aa10.6□□□□□ -0.71
TNPO1-201ENST00000337273 PPM1GO15355 546 aaPredicted RBP10.59□□□□□ -0.71
TNPO1-201ENST00000337273 EEA1Q15075 1411 aa10.59□□□□□ -0.71
TNPO1-201ENST00000337273 NCLP19338 710 aaKnown RBP10.59□□□□□ -0.71
TNPO1-201ENST00000337273 ABCC9O60706 1549 aa10.58□□□□□ -0.72
TNPO1-201ENST00000337273 TIMELESSQ9UNS1 1208 aa10.58□□□□□ -0.72
TNPO1-201ENST00000337273 ERICH6BQ5W0A0 696 aa10.57□□□□□ -0.72
TNPO1-201ENST00000337273 MRS2Q9HD23 443 aa10.57□□□□□ -0.72
TNPO1-201ENST00000337273 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
TNPO1-201ENST00000337273 FBLN2P98095 1184 aa10.56□□□□□ -0.72
TNPO1-201ENST00000337273 ZNF777Q9ULD5 760 aaPredicted RBP10.56□□□□□ -0.72
TNPO1-201ENST00000337273 B4GALNT3Q6L9W6 998 aa10.55□□□□□ -0.72
TNPO1-201ENST00000337273 CCDC180Q9P1Z9 1646 aa10.55□□□□□ -0.72
TNPO1-201ENST00000337273 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
TNPO1-201ENST00000337273 CDK11BP21127 795 aaKnown RBP10.54□□□□□ -0.72
TNPO1-201ENST00000337273 ZCCHC6Q5VYS8 1495 aaKnown RBP10.53□□□□□ -0.72
TNPO1-201ENST00000337273 PABPN1Q86U42 306 aaKnown RBP eCLIP10.53□□□□□ -0.72
TNPO1-201ENST00000337273 TSPY4P0CV99 314 aa10.51□□□□□ -0.73
TNPO1-201ENST00000337273 TSPY10P0CW01 314 aa10.51□□□□□ -0.73
TNPO1-201ENST00000337273 CDCA8Q53HL2 280 aa10.51□□□□□ -0.73
TNPO1-201ENST00000337273 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
TNPO1-201ENST00000337273 A0A0U1RQG5 324 aaPredicted RBP10.5□□□□□ -0.73
TNPO1-201ENST00000337273 CHMP4BQ9H444 224 aaKnown RBP10.5□□□□□ -0.73
TNPO1-201ENST00000337273 CASC1Q6TDU7 716 aa10.5□□□□□ -0.73
TNPO1-201ENST00000337273 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
TNPO1-201ENST00000337273 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
TNPO1-201ENST00000337273 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
TNPO1-201ENST00000337273 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
TNPO1-201ENST00000337273 RGS3P49796 1198 aa10.48□□□□□ -0.73
TNPO1-201ENST00000337273 CHIC2Q9UKJ5 165 aa10.47□□□□□ -0.73
TNPO1-201ENST00000337273 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
TNPO1-201ENST00000337273 CFAP44Q96MT7 982 aa10.46□□□□□ -0.73
TNPO1-201ENST00000337273 ANO8Q9HCE9 1232 aaPredicted RBP10.46□□□□□ -0.73
TNPO1-201ENST00000337273 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
TNPO1-201ENST00000337273 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.74
TNPO1-201ENST00000337273 CLIP1P30622 1438 aa10.45□□□□□ -0.74
TNPO1-201ENST00000337273 MS4A1P11836 297 aa10.45□□□□□ -0.74
TNPO1-201ENST00000337273 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
TNPO1-201ENST00000337273 NPM1P06748 294 aaKnown RBP eCLIP10.44□□□□□ -0.74
TNPO1-201ENST00000337273 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
TNPO1-201ENST00000337273 CFAP53Q96M91 514 aa10.44□□□□□ -0.74
TNPO1-201ENST00000337273 PPP4R2Q9NY27 417 aa10.44□□□□□ -0.74
TNPO1-201ENST00000337273 TULP1O00294 542 aaPredicted RBP10.43□□□□□ -0.74
TNPO1-201ENST00000337273 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
TNPO1-201ENST00000337273 CHGAP10645 457 aaKnown RBP10.43□□□□□ -0.74
TNPO1-201ENST00000337273 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
TNPO1-201ENST00000337273 KDM2AQ9Y2K7 1162 aa10.43□□□□□ -0.74
TNPO1-201ENST00000337273 GOLGA6L6A8MZA4 724 aa10.42□□□□□ -0.74
TNPO1-201ENST00000337273 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
TNPO1-201ENST00000337273 RBM19Q9Y4C8 960 aaKnown RBP10.41□□□□□ -0.74
TNPO1-201ENST00000337273 PTMAP06454 111 aaKnown RBP10.4□□□□□ -0.74
TNPO1-201ENST00000337273 DNTTIP2Q5QJE6 756 aaKnown RBP10.4□□□□□ -0.74
TNPO1-201ENST00000337273 MAPK8IP2Q13387 824 aaPredicted RBP10.4□□□□□ -0.74
TNPO1-201ENST00000337273 PTMSP20962 102 aa10.4□□□□□ -0.74
TNPO1-201ENST00000337273 NRDCO43847 1150 aa10.4□□□□□ -0.75
TNPO1-201ENST00000337273 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
TNPO1-201ENST00000337273 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
TNPO1-201ENST00000337273 PNNQ9H307 717 aaKnown RBP10.38□□□□□ -0.75
TNPO1-201ENST00000337273 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
TNPO1-201ENST00000337273 KNSTRNQ9Y448 316 aa10.37□□□□□ -0.75
TNPO1-201ENST00000337273 CEP162Q5TB80 1403 aa10.36□□□□□ -0.75
TNPO1-201ENST00000337273 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
TNPO1-201ENST00000337273 CHAF1AQ13111 956 aaPredicted RBP10.35□□□□□ -0.75
TNPO1-201ENST00000337273 FTSJ3Q8IY81 847 aaKnown RBP10.35□□□□□ -0.75
TNPO1-201ENST00000337273 TNIKQ9UKE5 1360 aa10.35□□□□□ -0.75
TNPO1-201ENST00000337273 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
TNPO1-201ENST00000337273 NUDCQ9Y266 331 aa10.34□□□□□ -0.75
TNPO1-201ENST00000337273 CCER2I3L3R5 266 aa10.34□□□□□ -0.75
TNPO1-201ENST00000337273 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
TNPO1-201ENST00000337273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.33□□□□□ -0.764e-9■■□□□ 12.1
TNPO1-201ENST00000337273 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
TNPO1-201ENST00000337273 SLKQ9H2G2 1235 aaPredicted RBP10.31□□□□□ -0.76
TNPO1-201ENST00000337273 MSNP26038 577 aaKnown RBP10.31□□□□□ -0.76
TNPO1-201ENST00000337273 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
TNPO1-201ENST00000337273 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
TNPO1-201ENST00000337273 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
TNPO1-201ENST00000337273 MAPK8IP3Q9UPT6 1336 aa10.3□□□□□ -0.76
TNPO1-201ENST00000337273 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
TNPO1-201ENST00000337273 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
TNPO1-201ENST00000337273 RRP7BPQ9NSQ0 103 aa10.29□□□□□ -0.76
TNPO1-201ENST00000337273 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
TNPO1-201ENST00000337273 CARD11Q9BXL7 1154 aa10.29□□□□□ -0.76
TNPO1-201ENST00000337273 HSP90AB1P08238 724 aaKnown RBP10.28□□□□□ -0.76
TNPO1-201ENST00000337273 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
TNPO1-201ENST00000337273 HSCBQ8IWL3 235 aa10.27□□□□□ -0.77
TNPO1-201ENST00000337273 PLEKHD1A6NEE1 506 aa10.27□□□□□ -0.77
TNPO1-201ENST00000337273 KIF27Q86VH2 1401 aa10.26□□□□□ -0.77
TNPO1-201ENST00000337273 A0A0G2JS52 829 aa10.26□□□□□ -0.77
TNPO1-201ENST00000337273 MCCP23508 829 aa10.26□□□□□ -0.77
TNPO1-201ENST00000337273 BRPF3Q9ULD4 1205 aa10.26□□□□□ -0.77
TNPO1-201ENST00000337273 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
TNPO1-201ENST00000337273 CHMP7Q8WUX9 453 aaPredicted RBP10.24□□□□□ -0.77
TNPO1-201ENST00000337273 RB1CC1Q8TDY2 1594 aa10.24□□□□□ -0.77
TNPO1-201ENST00000337273 APBB1O00213 710 aa10.23□□□□□ -0.77
TNPO1-201ENST00000337273 PDE4CQ08493 712 aa10.22□□□□□ -0.77
TNPO1-201ENST00000337273 CC2D1BQ5T0F9 858 aaKnown RBP10.22□□□□□ -0.77
TNPO1-201ENST00000337273 TMF1P82094 1093 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms